FFCP PHASE1:Hg19::chr18:59001014..59001026,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28316 | |EntrezGene=28316 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1760 | |HGNC=1760 | ||
|TSSclassifier=strong | |||
|UniProt=Q9HBT6 | |UniProt=Q9HBT6 | ||
|association_with_transcript=26bp_to_ENST00000536675,uc002lif.2_5end | |association_with_transcript=26bp_to_ENST00000536675,uc002lif.2_5end | ||
|cluster_id=chr18:59001014..59001026,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_CDH20_5end | |description=CAGE_peak_4_at_CDH20_5end | ||
|id=chr18:59001014..59001026,+ | |id=chr18:59001014..59001026,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000342;3.20e-07;1!CL:0002565;3.20e-07;1!CL:0002581;3.20e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002581,2.09e-07,1;CL:0000342,6.57e-07,1;CL:0002565,6.57e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.98e-12;82!UBERON:0006241;2.40e-09;3!UBERON:0003057;2.40e-09;3!UBERON:0006215;8.31e-09;3!UBERON:0005425;9.86e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;3.57e-44;34!UBERON:0000073;7.37e-43;53!UBERON:0002616;7.37e-43;53!UBERON:0002780;6.75e-42;41!UBERON:0001890;6.75e-42;41!UBERON:0001869;3.34e-41;32!UBERON:0002791;3.66e-41;32!UBERON:0002619;1.10e-40;22!UBERON:0003528;1.85e-39;34!UBERON:0002020;1.85e-39;34!UBERON:0000956;1.07e-35;25!UBERON:0000203;1.07e-35;25!UBERON:0001950;1.00e-31;20!UBERON:0001017;1.86e-24;75!UBERON:0000200;2.25e-24;6!UBERON:0001016;5.70e-24;83!UBERON:0004732;1.39e-21;13!UBERON:0000955;1.47e-21;68!UBERON:0001870;2.80e-18;3!UBERON:0004733;3.75e-17;12!UBERON:0002028;3.75e-17;12!UBERON:0000125;3.32e-16;9!UBERON:0002308;3.32e-16;9!UBERON:0002298;6.34e-16;6!UBERON:0005162;9.73e-14;2!UBERON:0000122;9.73e-14;2!UBERON:0009663;1.13e-13;7!UBERON:0001954;3.13e-13;2!UBERON:0003022;3.13e-13;2!UBERON:0002421;3.13e-13;2!UBERON:0002600;3.13e-13;2!UBERON:0001897;8.98e-13;2!UBERON:0002702;8.98e-13;2!UBERON:0001875;8.98e-13;2!UBERON:0006514;8.98e-13;2!UBERON:0010225;8.98e-13;2!UBERON:0007023;2.70e-12;114!UBERON:0000349;1.87e-11;5!UBERON:0001872;3.48e-11;5!UBERON:0002021;3.48e-11;5!UBERON:0002680;1.14e-10;9!UBERON:0002420;1.14e-10;9!UBERON:0007245;1.14e-10;9!UBERON:0010009;1.14e-10;9!UBERON:0001895;1.14e-10;9!UBERON:0010011;1.14e-10;9!UBERON:0000454;1.14e-10;9!UBERON:0011216;7.49e-10;132!UBERON:0002240;2.40e-09;3!UBERON:0005174;2.40e-09;3!UBERON:0001137;2.40e-09;3!UBERON:0000988;8.31e-09;3!UBERON:0001896;8.31e-09;3!UBERON:0005290;8.31e-09;3!UBERON:0000941;9.86e-08;1!UBERON:0001785;9.86e-08;1!UBERON:0002464;9.86e-08;1!UBERON:0004904;9.86e-08;1!UBERON:0001021;9.86e-08;1!UBERON:0002336;1.08e-07;1!UBERON:0011215;1.08e-07;1!UBERON:0001018;1.08e-07;1!UBERON:0002473;1.08e-07;1!UBERON:0005340;1.08e-07;1!UBERON:0003544;1.08e-07;1!UBERON:0005970;1.08e-07;1!UBERON:0002316;1.08e-07;1!UBERON:0001020;1.08e-07;1!UBERON:0002437;1.08e-07;1!UBERON:0002581;3.20e-07;1!UBERON:0002902;3.20e-07;1!UBERON:0001882;3.20e-07;1!UBERON:0002022;3.20e-07;1!UBERON:0002038;3.20e-07;1!UBERON:0009661;3.20e-07;1!UBERON:0002950;3.20e-07;1!UBERON:0009899;3.20e-07;1!UBERON:0002506;3.20e-07;1!UBERON:0007190;3.20e-07;1!UBERON:0005403;3.20e-07;1!UBERON:0001891;3.20e-07;1!UBERON:0001769;3.20e-07;1!UBERON:0010314;4.21e-07;132!UBERON:0002784;8.31e-07;4 | |||
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|short_description=p4@CDH20 | |short_description=p4@CDH20 | ||
}} | }} |
Latest revision as of 02:03, 20 September 2015
Short description: | p4@CDH20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH20_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 26bp_to_ENST00000536675, uc002lif.2_5end |
EntrezGene: | CDH20 |
HGNC: | 1760 |
UniProt: | Q9HBT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 2.09e-07 | 1 |
pigment cell (sensu Vertebrata) | 6.57e-07 | 1 |
iris pigment epithelial cell | 6.57e-07 | 1 |