FFCP PHASE1:Hg19::chr7:94034974..94035010,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1278 | |EntrezGene=1278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2198 | |HGNC=2198 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010lfh.1_5end | |association_with_transcript=0bp_to_uc010lfh.1_5end | ||
|cluster_id=chr7:94034974..94035010,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_10_at_COL1A2_5end | |description=CAGE_peak_10_at_COL1A2_5end | ||
|id=chr7:94034974..94035010,+ | |id=chr7:94034974..94035010,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.42e-42!180;CL:0000057!8.70e-27!75;CL:0000680!1.62e-20!57;CL:0000056!1.62e-20!57;CL:0000355!1.62e-20!57;CL:0000187!1.79e-19!54;CL:0000183!2.38e-19!59;CL:0000393!6.23e-17!60;CL:0000211!6.23e-17!60;CL:0000192!2.82e-16!42;CL:0000514!2.82e-16!42;CL:0000048!3.29e-13!430;CL:0000723!2.89e-12!436;CL:0000359!4.46e-12!32;CL:0000034!2.37e-11!444;CL:0002620!3.39e-10!23;CL:0002371!3.44e-07!591;CL:0002494!3.54e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.42e-42!180;CL:0000057!8.70e-27!75;CL:0000680!1.62e-20!57;CL:0000056!1.62e-20!57;CL:0000355!1.62e-20!57;CL:0000187!1.79e-19!54;CL:0000183!2.38e-19!59;CL:0000393!6.23e-17!60;CL:0000211!6.23e-17!60;CL:0000192!2.82e-16!42;CL:0000514!2.82e-16!42;CL:0000048!3.29e-13!430;CL:0000723!2.89e-12!436;CL:0000359!4.46e-12!32;CL:0000034!2.37e-11!444;CL:0002620!3.39e-10!23;CL:0002371!3.44e-07!591;CL:0002494!3.54e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000187;7.33e-10;55!CL:0000192;2.18e-09;43!CL:0000359;4.01e-09;32!CL:0000057;4.55e-09;73!CL:0002620;1.26e-08;23!CL:0002320;1.40e-08;188!CL:0000134;3.46e-08;55!CL:0002494;4.06e-08;16!CL:0000048;1.43e-07;58!CL:0000723;1.45e-07;61!CL:0000499;2.06e-07;28!CL:0000393;6.45e-07;61!CL:0000211;6.45e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.03e-24,76;CL:0000680,5.49e-18,58;CL:0000056,5.49e-18,58;CL:0000355,5.49e-18,58;CL:0000048,1.62e-17,427;CL:0000187,2.14e-17,55;CL:0000723,1.13e-16,433;CL:0000034,1.35e-15,441;CL:0000192,1.26e-14,43;CL:0000514,1.26e-14,43;CL:0000393,1.98e-14,61;CL:0000211,1.98e-14,61;CL:0000359,1.05e-09,32;CL:0002620,1.40e-08,23;CL:0002494,3.61e-08,16;CL:0002320,5.50e-08,361;CL:0000499,2.40e-07,28;CL:0000134,5.65e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000514;2.18e-09;43!CL:0000355;1.46e-08;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.41e-23!83;UBERON:0002329!1.41e-23!83;UBERON:0003077!1.41e-23!83;UBERON:0003059!1.41e-23!83;UBERON:0007282!1.41e-23!83;UBERON:0009618!1.41e-23!83;UBERON:0007285!1.41e-23!83;UBERON:0004290!1.91e-21!70;UBERON:0001134!1.19e-20!61;UBERON:0002036!1.19e-20!61;UBERON:0003082!1.19e-20!61;UBERON:0002385!3.92e-20!63;UBERON:0001015!3.92e-20!63;UBERON:0000383!3.92e-20!63;UBERON:0000486!4.59e-17!82;UBERON:0005256!4.19e-13!143;UBERON:0004872!1.24e-10!84;UBERON:0001637!1.89e-09!42;UBERON:0003509!1.89e-09!42;UBERON:0004572!1.89e-09!42;UBERON:0002100!4.19e-09!216;UBERON:0004573!7.39e-09!33;UBERON:0004571!7.39e-09!33;UBERON:0003102!7.26e-08!95;UBERON:0000475!1.11e-07!365;UBERON:0002199!1.48e-07!45;UBERON:0002416!1.48e-07!45;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0001009!3.50e-07!113;UBERON:0004535!3.66e-07!110;UBERON:0001013!6.28e-07!14;UBERON:0002097!7.38e-07!40;UBERON:0000490!8.74e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.41e-23!83;UBERON:0002329!1.41e-23!83;UBERON:0003077!1.41e-23!83;UBERON:0003059!1.41e-23!83;UBERON:0007282!1.41e-23!83;UBERON:0009618!1.41e-23!83;UBERON:0007285!1.41e-23!83;UBERON:0004290!1.91e-21!70;UBERON:0001134!1.19e-20!61;UBERON:0002036!1.19e-20!61;UBERON:0003082!1.19e-20!61;UBERON:0002385!3.92e-20!63;UBERON:0001015!3.92e-20!63;UBERON:0000383!3.92e-20!63;UBERON:0000486!4.59e-17!82;UBERON:0005256!4.19e-13!143;UBERON:0004872!1.24e-10!84;UBERON:0001637!1.89e-09!42;UBERON:0003509!1.89e-09!42;UBERON:0004572!1.89e-09!42;UBERON:0002100!4.19e-09!216;UBERON:0004573!7.39e-09!33;UBERON:0004571!7.39e-09!33;UBERON:0003102!7.26e-08!95;UBERON:0000475!1.11e-07!365;UBERON:0002199!1.48e-07!45;UBERON:0002416!1.48e-07!45;UBERON:0002049!1.65e-07!79;UBERON:0007798!1.65e-07!79;UBERON:0001009!3.50e-07!113;UBERON:0004535!3.66e-07!110;UBERON:0001013!6.28e-07!14;UBERON:0002097!7.38e-07!40;UBERON:0000490!8.74e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0004457;1.44e-08;9!UBERON:0000042;1.44e-08;9!UBERON:0002385;1.55e-08;31!UBERON:0001015;1.55e-08;31!UBERON:0000383;1.55e-08;31!UBERON:0003688;3.07e-08;6!UBERON:0002358;3.07e-08;6!UBERON:0003684;3.07e-08;6!UBERON:0001178;3.07e-08;6!UBERON:0002384;8.59e-08;198!UBERON:0004573;5.30e-07;33!UBERON:0004571;5.30e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.11e-18,62;UBERON:0002036,1.11e-18,62;UBERON:0003082,1.11e-18,62;UBERON:0007524,2.28e-18,73;UBERON:0002329,5.63e-18,71;UBERON:0003059,5.63e-18,71;UBERON:0007282,5.63e-18,71;UBERON:0004290,5.63e-18,71;UBERON:0009618,5.63e-18,71;UBERON:0002385,1.21e-17,64;UBERON:0001015,1.21e-17,64;UBERON:0000383,1.21e-17,64;UBERON:0003077,1.63e-17,72;UBERON:0007285,1.63e-17,72;UBERON:0000486,3.55e-15,83;UBERON:0007503,5.14e-15,78;UBERON:0005256,1.15e-10,122;UBERON:0003104,2.13e-09,160;UBERON:0009142,2.13e-09,160;UBERON:0003688,3.11e-08,6;UBERON:0002358,3.11e-08,6;UBERON:0003684,3.11e-08,6;UBERON:0001178,3.11e-08,6;UBERON:0002384,3.43e-08,371;UBERON:0002199,4.50e-08,46;UBERON:0002416,4.50e-08,46;UBERON:0004872,1.07e-07,83;UBERON:0001637,1.16e-07,42;UBERON:0003509,1.16e-07,42;UBERON:0004572,1.16e-07,42;UBERON:0002097,1.50e-07,41;UBERON:0004573,1.52e-07,33;UBERON:0004571,1.52e-07,33;UBERON:0000926,3.92e-07,315;UBERON:0004120,3.92e-07,315;UBERON:0006603,3.92e-07,315;UBERON:0000490,3.93e-07,148;UBERON:0003102,7.06e-07,99 | |||
|phase1_expression=10.1739892391512,15.4152377201508,11.2763523276777,20.0146596706261,10.7270662662549,5.23403114460221,0,3.79031924056099,1.04474251279935,0,0,0,1.31883489114227,0.74259811776028,1.32558950291166,3.36162573225888,2.41077811209591,2.19093027116212,1.95173119516203,1.35433163884467,1.63200552995402,1.25381888591235,0,0.136874425072884,0.376627918784408,0,0,0,0,0,0.619264493264304,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,1.53435074212236,5.42158728576849,7.52006865953834,5.79386075843295,0,13.1391414981712,0.472674085820339,1.99556457716308,0.614843499851882,0.130979075497713,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,18.3879622127268,3.16576279161449,2.78059279707759,9.17877186396204,2.4826786753885,2.80338800071154,5.33744978648525,2.22000793575444,2.17847724779836,3.50247747381189,2.12500474047496,2.8757911252537,5.76175924479999,0.234321431833797,0,0,1.04614076386261,0.939475989150119,0.971237666208789,0.421352420106746,0.408308342509787,1.10550885580591,1.13658359293342,10.6920257155385,15.3305496152705,0.910161361938026,2.15585442544872,0.505008341862199,1.00094815897571,0.554128230968366,3.95079858792754,8.58165828237255,8.86404547548921,0.794025282120147,3.58779271377724,6.62027905337559,7.2056846394251,7.80236849819446,3.91599611106068,6.69865404118636,5.58350568994769,10.4641325989585,3.31285817548075,3.5340728394176,6.16734320903406,6.7891343863901,7.81021103536552,3.52632343796741,1.3564847384839,0,0,0,0,0,0,0.310983165046111,0,0,1.56449532329816,3.21620469096443,1.38134921352481,1.39310378409594,3.60939740834793,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,4.41026134156626,0,0,0,0,0,0.343135620597051,0,0,0,0,0.325808305310325,2.07986957055916,0,0,1.40890433082986,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,3.4214489204541,0.102827492703324,0,0,0.336393253036082,1.74384027533312,0.36669142910475,2.97324946242889,3.57656445851882,0.845302752556,2.92531928243358,2.08014873822732,0.514414748524284,0,0.266422179016099,1.28680194292333,3.25572963234866,0.823240336780769,0.977208552881205,0.710783897485092,0,0.904318131178758,0.871533458600294,0,0,0,0,2.15662369942424,5.7430967917057,1.42636905040718,2.60606352001643,2.4657158706046,0.358121926479791,0,0,0,0,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0.49076596687656,2.00068208423871,1.35632511849868,20.5891152915499,17.664469890919,10.7237642223076,7.9656162195045,6.01892199455438,0,0,2.65690239414175,2.76553752812555,1.21637060255316,2.93701736194111,6.86286847621712,0,0,0,0.606255142892519,6.65741758041988,2.72151263996712,12.4053903909388,5.98501695823444,22.733467649079,12.429497477803,7.67560873600055,18.015639168084,2.96836132889982,0.308419387605311,1.59805552781814,0.9033987161519,0,1.62694529843943,0,0,0,2.18147451512753,4.00600569614778,5.37610101333639,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,0.206082023295445,0,0.082509499920588,0,0,4.82051789532479,0.48335359146061,2.00263202249038,2.45605879561807,1.51620229732984,1.93356440762893,3.91545073568417,1.02271952899321,3.38321735457602,0,0,0,0,0.464845549297286,7.870308670766,0,2.7723022215848,0.532306030317022,1.73986598415015,2.40921484835096,1.71749864090389,1.86079184679834,0.632758849437452,5.3376454298671,1.27948895655667,2.56763392820352,0.318203247925937,1.56989728039846,1.07923474549989,4.11805544604082,2.70968525395079,1.41527737101321,1.58510321173008,2.94880919367287,0.48763373908959,1.70599442741899,2.11300293513511,2.59349831675173,4.94919011837995,3.39024349860728,2.2054613741845,3.3171948762061,0.876901770507525,3.47265320560013,3.9353685122798,1.62328301570163,0.6196469961995,2.53526042279017,0.430234056612155,1.08073945114433,4.280052617775,1.06428319221179,5.69990615303693,4.93942339439853,0.379473173765715,0.699869440489966,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.95497793895076,0.890894042497916,1.22864280839693,0,0,0,0,0,0.996239941255349,0.276283915531148,0,0,0,9.33118762985422,0,0,0,0.394573622547734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.615602068030377,0,0,0,0,0,2.38153742844842,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,1.83309043480088,0,0,0,0,13.6438200040794,0,0,0,0,0,2.41981432097328,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,1.0319161948297,0,0,0,0.0969890164884194,0,1.12990370390266,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0.67952103036807,0.313808538937,0.407992870545287,0,0,0,0,0.429765441419957,0,1.67569440763353,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,10.0883967391873,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,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| ||
|short_description=p10@COL1A2 | |short_description=p10@COL1A2 | ||
}} | }} |
Latest revision as of 02:12, 20 September 2015
Short description: | p10@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 0bp_to_uc010lfh.1_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.03e-24 | 76 |
muscle precursor cell | 5.49e-18 | 58 |
myoblast | 5.49e-18 | 58 |
multi-potent skeletal muscle stem cell | 5.49e-18 | 58 |
multi fate stem cell | 1.62e-17 | 427 |
muscle cell | 2.14e-17 | 55 |
somatic stem cell | 1.13e-16 | 433 |
stem cell | 1.35e-15 | 441 |
smooth muscle cell | 1.26e-14 | 43 |
smooth muscle myoblast | 1.26e-14 | 43 |
electrically responsive cell | 1.98e-14 | 61 |
electrically active cell | 1.98e-14 | 61 |
vascular associated smooth muscle cell | 1.05e-09 | 32 |
skin fibroblast | 1.40e-08 | 23 |
cardiocyte | 3.61e-08 | 16 |
connective tissue cell | 5.50e-08 | 361 |
stromal cell | 2.40e-07 | 28 |
mesenchymal cell | 5.65e-07 | 354 |