FFCP PHASE1:Hg19::chr10:96522361..96522370,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1557 | |EntrezGene=1557 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2621 | |HGNC=2621 | ||
|TSSclassifier=strong | |||
|UniProt=P33261 | |UniProt=P33261 | ||
|association_with_transcript=-10bp_to_ENST00000371321_5end | |association_with_transcript=-10bp_to_ENST00000371321_5end | ||
|cluster_id=chr10:96522361..96522370,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_3_at_CYP2C19_5end | |description=CAGE_peak_3_at_CYP2C19_5end | ||
|id=chr10:96522361..96522370,+ | |id=chr10:96522361..96522370,+ | ||
|ontology_enrichment_celltype=CL:0000181!3.69e-13!12;CL:0000417!3.69e-13!12;CL:0000668!3.69e-13!12;CL:0000414!3.69e-13!12;CL:0000412!3.69e-13!12;CL:0000182!3.69e-13!12 | |ontology_enrichment_celltype=CL:0000181!3.69e-13!12;CL:0000417!3.69e-13!12;CL:0000668!3.69e-13!12;CL:0000414!3.69e-13!12;CL:0000412!3.69e-13!12;CL:0000182!3.69e-13!12 | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.53e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.53e-10,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.21e-14!19;UBERON:0006925!2.21e-14!19;UBERON:0008836!2.21e-14!19;UBERON:0008835!1.81e-12!22;UBERON:0003894!1.81e-12!22;UBERON:0009854!6.11e-12!23;UBERON:0007499!5.21e-11!25;UBERON:0009497!5.21e-11!25;UBERON:0000015!5.21e-11!25;UBERON:0002423!5.21e-11!25;UBERON:0006235!5.21e-11!25;UBERON:0004161!5.21e-11!25;UBERON:0005057!1.34e-10!26;UBERON:0009856!1.34e-10!26;UBERON:0002108!1.55e-10!14;UBERON:0000160!9.02e-10!27;UBERON:0004921!1.31e-09!129;UBERON:0004185!1.31e-09!129;UBERON:0002365!6.20e-09!31;UBERON:0002330!6.20e-09!31;UBERON:0002368!6.09e-08!35;UBERON:0001007!7.08e-08!155;UBERON:0001555!7.08e-08!155;UBERON:0007026!7.08e-08!155;UBERON:0003929!1.01e-07!54;UBERON:0005409!1.17e-07!35;UBERON:0004119!3.69e-07!169;UBERON:0000925!3.69e-07!169;UBERON:0006595!3.69e-07!169;UBERON:0002530!4.60e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.38e-14;19!UBERON:0006925;3.38e-14;19!UBERON:0002423;5.75e-11;25!UBERON:0002365;2.97e-09;31!UBERON:0002330;2.97e-09;31!UBERON:0000160;3.00e-07;17!UBERON:0001007;3.07e-07;81!UBERON:0002368;3.57e-07;33!UBERON:0002108;5.70e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.31e-14,19;UBERON:0006925,3.31e-14,19;UBERON:0008836,3.31e-14,19;UBERON:0008835,2.26e-12,22;UBERON:0003894,2.26e-12,22;UBERON:0009854,7.25e-12,23;UBERON:0007499,5.65e-11,25;UBERON:0009497,5.65e-11,25;UBERON:0000015,5.65e-11,25;UBERON:0002423,5.65e-11,25;UBERON:0006235,5.65e-11,25;UBERON:0004161,5.65e-11,25;UBERON:0009856,1.40e-10,26;UBERON:0002365,5.54e-09,31;UBERON:0002330,5.54e-09,31;UBERON:0002368,4.96e-08,35;UBERON:0000160,3.04e-07,17;UBERON:0002108,5.70e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,10.0434284135839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39566295674957,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.07020139287323,0,10.0434284135839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83064206410685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93104467356165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.39566295674957,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CYP2C19 | |short_description=p3@CYP2C19 | ||
}} | }} |
Latest revision as of 02:34, 20 September 2015
Short description: | p3@CYP2C19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CYP2C19_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -10bp_to_ENST00000371321_5end |
EntrezGene: | CYP2C19 |
HGNC: | 2621 |
UniProt: | P33261 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.53e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 3.31e-14 | 19 |
digestive gland | 3.31e-14 | 19 |
liver bud | 3.31e-14 | 19 |
hepatic diverticulum | 2.26e-12 | 22 |
liver primordium | 2.26e-12 | 22 |
digestive tract diverticulum | 7.25e-12 | 23 |
epithelial sac | 5.65e-11 | 25 |
epithelium of foregut-midgut junction | 5.65e-11 | 25 |
anatomical boundary | 5.65e-11 | 25 |
hepatobiliary system | 5.65e-11 | 25 |
foregut-midgut junction | 5.65e-11 | 25 |
septum transversum | 5.65e-11 | 25 |
sac | 1.40e-10 | 26 |
exocrine gland | 5.54e-09 | 31 |
exocrine system | 5.54e-09 | 31 |
endocrine gland | 4.96e-08 | 35 |
intestine | 3.04e-07 | 17 |
small intestine | 5.70e-07 | 4 |