FFCP PHASE1:Hg19::chr4:10118469..10118521,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9948 | |EntrezGene=9948 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12754 | |HGNC=12754 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000499869,ENST00000509600_5end | |association_with_transcript=0bp_to_ENST00000499869,ENST00000509600_5end | ||
|cluster_id=chr4:10118469..10118521,- | |||
|description=CAGE_peak_3_at_WDR1_5end | |description=CAGE_peak_3_at_WDR1_5end | ||
|id=chr4:10118469..10118521,- | |id=chr4:10118469..10118521,- | ||
|ontology_enrichment_celltype=CL:0000393!1.93e-09!60;CL:0000211!1.93e-09!60;CL:0000791!5.61e-09!18;CL:0000789!5.61e-09!18;CL:0002420!5.61e-09!18;CL:0002419!5.61e-09!18;CL:0000790!5.61e-09!18;CL:0000084!6.42e-09!25;CL:0000827!6.42e-09!25;CL:0000183!2.22e-08!59;CL:0000359!2.28e-08!32;CL:0000144!4.43e-08!625;CL:0000192!1.82e-07!42;CL:0000514!1.82e-07!42;CL:0000838!5.58e-07!52;CL:0000187!5.92e-07!54;CL:0000680!7.12e-07!57;CL:0000056!7.12e-07!57;CL:0000355!7.12e-07!57;CL:0000625!7.26e-07!11 | |ontology_enrichment_celltype=CL:0000393!1.93e-09!60;CL:0000211!1.93e-09!60;CL:0000791!5.61e-09!18;CL:0000789!5.61e-09!18;CL:0002420!5.61e-09!18;CL:0002419!5.61e-09!18;CL:0000790!5.61e-09!18;CL:0000084!6.42e-09!25;CL:0000827!6.42e-09!25;CL:0000183!2.22e-08!59;CL:0000359!2.28e-08!32;CL:0000144!4.43e-08!625;CL:0000192!1.82e-07!42;CL:0000514!1.82e-07!42;CL:0000838!5.58e-07!52;CL:0000187!5.92e-07!54;CL:0000680!7.12e-07!57;CL:0000056!7.12e-07!57;CL:0000355!7.12e-07!57;CL:0000625!7.26e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.76e-09;18!CL:0000789;5.76e-09;18!CL:0002419;5.76e-09;18!CL:0000084;6.87e-09;25!CL:0000359;5.13e-08;32!CL:1000449;1.78e-07;15!CL:0000625;6.96e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.61e-09,18;CL:0000789,5.61e-09,18;CL:0002420,5.61e-09,18;CL:0002419,5.61e-09,18;CL:0000790,5.61e-09,18;CL:0000084,6.42e-09,25;CL:0000827,6.42e-09,25;CL:0000393,7.83e-09,61;CL:0000211,7.83e-09,61;CL:0000359,2.28e-08,32;CL:1000449,1.78e-07,15;CL:0000838,5.58e-07,52;CL:0000625,7.26e-07,11;CL:0000192,7.69e-07,43;CL:0000514,7.69e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000790;5.76e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.00e-08!110;UBERON:0001009!6.56e-08!113 | |ontology_enrichment_uberon=UBERON:0004535!3.00e-08!110;UBERON:0001009!6.56e-08!113 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.78e-07;15!UBERON:0004819;1.78e-07;15!UBERON:0001285;1.78e-07;15!UBERON:0007684;1.78e-07;15!UBERON:0000353;9.49e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,4.13e-08,109;UBERON:0001009,8.99e-08,112;UBERON:0004211,1.78e-07,15;UBERON:0009773,1.78e-07,15;UBERON:0001231,1.78e-07,15;UBERON:0001285,1.78e-07,15;UBERON:0007684,1.78e-07,15;UBERON:0004208,1.78e-07,15;UBERON:0006555,5.84e-07,16;UBERON:0004819,5.84e-07,16;UBERON:0000353,9.59e-07,15 | |||
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327670148138 | ||
|short_description=p3@WDR1 | |short_description=p3@WDR1 | ||
}} | }} |
Latest revision as of 02:40, 20 September 2015
Short description: | p3@WDR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WDR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000499869, ENST00000509600_5end |
EntrezGene: | WDR1 |
HGNC: | 12754 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.61e-09 | 18 |
alpha-beta T cell | 5.61e-09 | 18 |
immature T cell | 5.61e-09 | 18 |
mature T cell | 5.61e-09 | 18 |
immature alpha-beta T cell | 5.61e-09 | 18 |
T cell | 6.42e-09 | 25 |
pro-T cell | 6.42e-09 | 25 |
electrically responsive cell | 7.83e-09 | 61 |
electrically active cell | 7.83e-09 | 61 |
vascular associated smooth muscle cell | 2.28e-08 | 32 |
epithelial cell of nephron | 1.78e-07 | 15 |
lymphoid lineage restricted progenitor cell | 5.58e-07 | 52 |
CD8-positive, alpha-beta T cell | 7.26e-07 | 11 |
smooth muscle cell | 7.69e-07 | 43 |
smooth muscle myoblast | 7.69e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 4.13e-08 | 109 |
circulatory system | 8.99e-08 | 112 |
nephron epithelium | 1.78e-07 | 15 |
renal tubule | 1.78e-07 | 15 |
nephron tubule | 1.78e-07 | 15 |
nephron | 1.78e-07 | 15 |
uriniferous tubule | 1.78e-07 | 15 |
nephrogenic mesenchyme | 1.78e-07 | 15 |
excretory tube | 5.84e-07 | 16 |
kidney epithelium | 5.84e-07 | 16 |
parenchyma | 9.59e-07 | 15 |