FFCP PHASE1:Hg19::chr7:94053635..94053729,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1278 | |EntrezGene=1278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2198 | |HGNC=2198 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=335bp_to_ENST00000469732_5end | |association_with_transcript=335bp_to_ENST00000469732_5end | ||
|cluster_id=chr7:94053635..94053729,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_4_at_COL1A2_5end | |description=CAGE_peak_4_at_COL1A2_5end | ||
|id=chr7:94053635..94053729,+ | |id=chr7:94053635..94053729,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.79e-49!180;CL:0000057!1.40e-27!75;CL:0000680!3.40e-21!57;CL:0000056!3.40e-21!57;CL:0000355!3.40e-21!57;CL:0000187!1.98e-20!54;CL:0000183!2.48e-19!59;CL:0000393!7.94e-18!60;CL:0000211!7.94e-18!60;CL:0000192!3.69e-16!42;CL:0000514!3.69e-16!42;CL:0000048!5.25e-13!430;CL:0000359!4.36e-12!32;CL:0000723!5.35e-12!436;CL:0000034!1.10e-11!444;CL:0002620!4.00e-11!23;CL:0002334!9.64e-08!12;CL:0002494!3.49e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.79e-49!180;CL:0000057!1.40e-27!75;CL:0000680!3.40e-21!57;CL:0000056!3.40e-21!57;CL:0000355!3.40e-21!57;CL:0000187!1.98e-20!54;CL:0000183!2.48e-19!59;CL:0000393!7.94e-18!60;CL:0000211!7.94e-18!60;CL:0000192!3.69e-16!42;CL:0000514!3.69e-16!42;CL:0000048!5.25e-13!430;CL:0000359!4.36e-12!32;CL:0000723!5.35e-12!436;CL:0000034!1.10e-11!444;CL:0002620!4.00e-11!23;CL:0002334!9.64e-08!12;CL:0002494!3.49e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.64e-11;55!CL:0000187;1.73e-11;55!CL:0000192;1.70e-10;43!CL:0000723;2.63e-10;61!CL:0000359;6.65e-10;32!CL:0000048;7.48e-10;58!CL:0000057;7.93e-10;73!CL:0002334;5.16e-09;12!CL:0002320;6.86e-09;188!CL:0000499;8.74e-09;28!CL:0000393;1.67e-08;61!CL:0000211;1.67e-08;61!CL:0002620;2.07e-08;23!CL:0002494;2.74e-08;16!CL:0000327;2.93e-08;15!CL:0000034;4.26e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.14e-25,76;CL:0000680,1.19e-20,58;CL:0000056,1.19e-20,58;CL:0000355,1.19e-20,58;CL:0000048,1.43e-20,427;CL:0000187,1.05e-19,55;CL:0000723,1.61e-19,433;CL:0000034,3.58e-18,441;CL:0000393,6.13e-17,61;CL:0000211,6.13e-17,61;CL:0000192,1.18e-14,43;CL:0000514,1.18e-14,43;CL:0000359,2.08e-10,32;CL:0002320,1.98e-09,361;CL:0002334,4.84e-09,12;CL:0000499,8.69e-09,28;CL:0002620,2.24e-08,23;CL:0002494,2.28e-08,16;CL:0000327,2.74e-08,15;CL:0000134,5.69e-08,354 | |||
|ontology_enrichment_development_v019=CL:0000355;4.38e-11;58!CL:0000514;1.70e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.79e-24!83;UBERON:0002329!1.79e-24!83;UBERON:0003077!1.79e-24!83;UBERON:0003059!1.79e-24!83;UBERON:0007282!1.79e-24!83;UBERON:0009618!1.79e-24!83;UBERON:0007285!1.79e-24!83;UBERON:0004290!3.52e-23!70;UBERON:0002385!2.82e-21!63;UBERON:0001015!2.82e-21!63;UBERON:0000383!2.82e-21!63;UBERON:0001134!3.57e-21!61;UBERON:0002036!3.57e-21!61;UBERON:0003082!3.57e-21!61;UBERON:0000486!3.25e-18!82;UBERON:0005256!2.64e-13!143;UBERON:0004872!2.98e-10!84;UBERON:0002100!5.95e-10!216;UBERON:0002199!2.17e-09!45;UBERON:0002416!2.17e-09!45;UBERON:0003102!3.70e-09!95;UBERON:0000475!4.70e-09!365;UBERON:0001637!3.94e-08!42;UBERON:0003509!3.94e-08!42;UBERON:0004572!3.94e-08!42;UBERON:0002097!7.04e-08!40;UBERON:0007100!1.27e-07!27;UBERON:0001013!1.54e-07!14;UBERON:0004573!1.59e-07!33;UBERON:0004571!1.59e-07!33;UBERON:0000948!2.84e-07!24;UBERON:0005498!2.84e-07!24;UBERON:0004140!2.84e-07!24;UBERON:0009881!2.84e-07!24;UBERON:0004141!2.84e-07!24;UBERON:0003084!2.84e-07!24;UBERON:0007005!2.84e-07!24;UBERON:0004139!2.84e-07!24;UBERON:0004291!2.84e-07!24;UBERON:0001009!5.67e-07!113;UBERON:0002049!6.50e-07!79;UBERON:0007798!6.50e-07!79;UBERON:0000490!6.95e-07!138 | |ontology_enrichment_uberon=UBERON:0000914!1.79e-24!83;UBERON:0002329!1.79e-24!83;UBERON:0003077!1.79e-24!83;UBERON:0003059!1.79e-24!83;UBERON:0007282!1.79e-24!83;UBERON:0009618!1.79e-24!83;UBERON:0007285!1.79e-24!83;UBERON:0004290!3.52e-23!70;UBERON:0002385!2.82e-21!63;UBERON:0001015!2.82e-21!63;UBERON:0000383!2.82e-21!63;UBERON:0001134!3.57e-21!61;UBERON:0002036!3.57e-21!61;UBERON:0003082!3.57e-21!61;UBERON:0000486!3.25e-18!82;UBERON:0005256!2.64e-13!143;UBERON:0004872!2.98e-10!84;UBERON:0002100!5.95e-10!216;UBERON:0002199!2.17e-09!45;UBERON:0002416!2.17e-09!45;UBERON:0003102!3.70e-09!95;UBERON:0000475!4.70e-09!365;UBERON:0001637!3.94e-08!42;UBERON:0003509!3.94e-08!42;UBERON:0004572!3.94e-08!42;UBERON:0002097!7.04e-08!40;UBERON:0007100!1.27e-07!27;UBERON:0001013!1.54e-07!14;UBERON:0004573!1.59e-07!33;UBERON:0004571!1.59e-07!33;UBERON:0000948!2.84e-07!24;UBERON:0005498!2.84e-07!24;UBERON:0004140!2.84e-07!24;UBERON:0009881!2.84e-07!24;UBERON:0004141!2.84e-07!24;UBERON:0003084!2.84e-07!24;UBERON:0007005!2.84e-07!24;UBERON:0004139!2.84e-07!24;UBERON:0004291!2.84e-07!24;UBERON:0001009!5.67e-07!113;UBERON:0002049!6.50e-07!79;UBERON:0007798!6.50e-07!79;UBERON:0000490!6.95e-07!138 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.87e-09;198!UBERON:0001013;4.40e-08;14!UBERON:0002385;1.08e-07;31!UBERON:0001015;1.08e-07;31!UBERON:0000383;1.08e-07;31!UBERON:0004457;2.39e-07;9!UBERON:0000042;2.39e-07;9!UBERON:0003688;4.87e-07;6!UBERON:0002358;4.87e-07;6!UBERON:0003684;4.87e-07;6!UBERON:0001178;4.87e-07;6 | |||
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| ||
|short_description=p4@COL1A2 | |short_description=p4@COL1A2 | ||
}} | }} |
Latest revision as of 02:50, 20 September 2015
Short description: | p4@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | 335bp_to_ENST00000469732_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.14e-25 | 76 |
muscle precursor cell | 1.19e-20 | 58 |
myoblast | 1.19e-20 | 58 |
multi-potent skeletal muscle stem cell | 1.19e-20 | 58 |
multi fate stem cell | 1.43e-20 | 427 |
muscle cell | 1.05e-19 | 55 |
somatic stem cell | 1.61e-19 | 433 |
stem cell | 3.58e-18 | 441 |
electrically responsive cell | 6.13e-17 | 61 |
electrically active cell | 6.13e-17 | 61 |
smooth muscle cell | 1.18e-14 | 43 |
smooth muscle myoblast | 1.18e-14 | 43 |
vascular associated smooth muscle cell | 2.08e-10 | 32 |
connective tissue cell | 1.98e-09 | 361 |
preadipocyte | 4.84e-09 | 12 |
stromal cell | 8.69e-09 | 28 |
skin fibroblast | 2.24e-08 | 23 |
cardiocyte | 2.28e-08 | 16 |
extracellular matrix secreting cell | 2.74e-08 | 15 |
mesenchymal cell | 5.69e-08 | 354 |