FFCP PHASE1:Hg19::chr7:94054463..94054512,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1278 | |EntrezGene=1278 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2198 | |HGNC=2198 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000478215_5end | |association_with_transcript=-69bp_to_ENST00000478215_5end | ||
|cluster_id=chr7:94054463..94054512,+ | |||
|coexpression_cluster_id=C59 | |coexpression_cluster_id=C59 | ||
|description=CAGE_peak_12_at_COL1A2_5end | |description=CAGE_peak_12_at_COL1A2_5end | ||
|id=chr7:94054463..94054512,+ | |id=chr7:94054463..94054512,+ | ||
|ontology_enrichment_celltype=CL:0000055!5.68e-44!180;CL:0000057!9.74e-28!75;CL:0000680!3.92e-18!57;CL:0000056!3.92e-18!57;CL:0000355!3.92e-18!57;CL:0000183!2.57e-17!59;CL:0000187!2.85e-17!54;CL:0000048!1.45e-16!430;CL:0000723!1.75e-15!436;CL:0000034!1.11e-14!444;CL:0000393!2.35e-14!60;CL:0000211!2.35e-14!60;CL:0000192!3.44e-14!42;CL:0000514!3.44e-14!42;CL:0000359!2.62e-11!32;CL:0002620!5.40e-10!23;CL:0002371!1.61e-08!591;CL:0002334!3.60e-08!12;CL:0002494!1.70e-07!16;CL:0002320!2.23e-07!365;CL:0000499!6.24e-07!27;CL:0000327!9.61e-07!14 | |ontology_enrichment_celltype=CL:0000055!5.68e-44!180;CL:0000057!9.74e-28!75;CL:0000680!3.92e-18!57;CL:0000056!3.92e-18!57;CL:0000355!3.92e-18!57;CL:0000183!2.57e-17!59;CL:0000187!2.85e-17!54;CL:0000048!1.45e-16!430;CL:0000723!1.75e-15!436;CL:0000034!1.11e-14!444;CL:0000393!2.35e-14!60;CL:0000211!2.35e-14!60;CL:0000192!3.44e-14!42;CL:0000514!3.44e-14!42;CL:0000359!2.62e-11!32;CL:0002620!5.40e-10!23;CL:0002371!1.61e-08!591;CL:0002334!3.60e-08!12;CL:0002494!1.70e-07!16;CL:0002320!2.23e-07!365;CL:0000499!6.24e-07!27;CL:0000327!9.61e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000134;1.04e-11;55!CL:0000723;3.54e-11;61!CL:0000048;1.73e-10;58!CL:0000057;5.46e-10;73!CL:0002334;2.89e-09;12!CL:0000499;4.90e-09;28!CL:0002320;5.54e-09;188!CL:0002620;8.96e-09;23!CL:0000187;9.82e-09;55!CL:0000359;1.14e-08;32!CL:0000034;1.31e-08;69!CL:0000192;4.60e-08;43!CL:0002570;6.77e-08;8!CL:0000327;9.75e-08;15!CL:0002494;1.40e-07;16!CL:0000393;3.76e-07;61!CL:0000211;3.76e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.88e-25,76;CL:0000048,2.93e-22,427;CL:0000723,2.67e-21,433;CL:0000034,4.56e-20,441;CL:0000680,8.72e-15,58;CL:0000056,8.72e-15,58;CL:0000355,8.72e-15,58;CL:0000187,2.20e-14,55;CL:0002320,2.76e-12,361;CL:0000393,7.52e-12,61;CL:0000211,7.52e-12,61;CL:0000192,1.07e-11,43;CL:0000514,1.07e-11,43;CL:0000134,3.17e-11,354;CL:0000499,2.84e-09,28;CL:0002334,4.50e-09,12;CL:0000359,5.17e-09,32;CL:0002620,8.07e-09,23;CL:0000219,2.37e-08,386;CL:0002570,5.22e-08,8;CL:0000327,7.14e-08,15;CL:0002494,1.64e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000514;4.60e-08;43!CL:0000355;2.10e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;3.14e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.73e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!7.66e-22!83;UBERON:0002329!7.66e-22!83;UBERON:0003077!7.66e-22!83;UBERON:0003059!7.66e-22!83;UBERON:0007282!7.66e-22!83;UBERON:0009618!7.66e-22!83;UBERON:0007285!7.66e-22!83;UBERON:0004290!6.44e-20!70;UBERON:0002385!1.90e-19!63;UBERON:0001015!1.90e-19!63;UBERON:0000383!1.90e-19!63;UBERON:0001134!4.21e-19!61;UBERON:0002036!4.21e-19!61;UBERON:0003082!4.21e-19!61;UBERON:0000486!9.43e-16!82;UBERON:0005256!1.56e-12!143;UBERON:0004872!2.13e-09!84;UBERON:0003102!4.54e-08!95;UBERON:0002384!5.30e-08!375;UBERON:0002100!5.42e-08!216;UBERON:0002049!8.16e-08!79;UBERON:0007798!8.16e-08!79;UBERON:0001637!8.18e-08!42;UBERON:0003509!8.18e-08!42;UBERON:0004572!8.18e-08!42;UBERON:0000475!8.22e-08!365;UBERON:0002199!9.00e-08!45;UBERON:0002416!9.00e-08!45;UBERON:0000948!9.56e-08!24;UBERON:0005498!9.56e-08!24;UBERON:0004140!9.56e-08!24;UBERON:0009881!9.56e-08!24;UBERON:0004141!9.56e-08!24;UBERON:0003084!9.56e-08!24;UBERON:0007005!9.56e-08!24;UBERON:0004139!9.56e-08!24;UBERON:0004291!9.56e-08!24;UBERON:0004535!1.26e-07!110;UBERON:0001013!1.43e-07!14;UBERON:0001009!2.61e-07!113;UBERON:0004573!5.22e-07!33;UBERON:0004571!5.22e-07!33;UBERON:0007100!9.44e-07!27 | |ontology_enrichment_uberon=UBERON:0000914!7.66e-22!83;UBERON:0002329!7.66e-22!83;UBERON:0003077!7.66e-22!83;UBERON:0003059!7.66e-22!83;UBERON:0007282!7.66e-22!83;UBERON:0009618!7.66e-22!83;UBERON:0007285!7.66e-22!83;UBERON:0004290!6.44e-20!70;UBERON:0002385!1.90e-19!63;UBERON:0001015!1.90e-19!63;UBERON:0000383!1.90e-19!63;UBERON:0001134!4.21e-19!61;UBERON:0002036!4.21e-19!61;UBERON:0003082!4.21e-19!61;UBERON:0000486!9.43e-16!82;UBERON:0005256!1.56e-12!143;UBERON:0004872!2.13e-09!84;UBERON:0003102!4.54e-08!95;UBERON:0002384!5.30e-08!375;UBERON:0002100!5.42e-08!216;UBERON:0002049!8.16e-08!79;UBERON:0007798!8.16e-08!79;UBERON:0001637!8.18e-08!42;UBERON:0003509!8.18e-08!42;UBERON:0004572!8.18e-08!42;UBERON:0000475!8.22e-08!365;UBERON:0002199!9.00e-08!45;UBERON:0002416!9.00e-08!45;UBERON:0000948!9.56e-08!24;UBERON:0005498!9.56e-08!24;UBERON:0004140!9.56e-08!24;UBERON:0009881!9.56e-08!24;UBERON:0004141!9.56e-08!24;UBERON:0003084!9.56e-08!24;UBERON:0007005!9.56e-08!24;UBERON:0004139!9.56e-08!24;UBERON:0004291!9.56e-08!24;UBERON:0004535!1.26e-07!110;UBERON:0001013!1.43e-07!14;UBERON:0001009!2.61e-07!113;UBERON:0004573!5.22e-07!33;UBERON:0004571!5.22e-07!33;UBERON:0007100!9.44e-07!27 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;2.97e-09;198!UBERON:0001013;1.04e-08;14!UBERON:0004457;2.79e-08;9!UBERON:0000042;2.79e-08;9!UBERON:0003688;6.15e-08;6!UBERON:0002358;6.15e-08;6!UBERON:0003684;6.15e-08;6!UBERON:0001178;6.15e-08;6!UBERON:0004573;9.96e-07;33!UBERON:0004571;9.96e-07;33 | |||
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| ||
|short_description=p12@COL1A2 | |short_description=p12@COL1A2 | ||
}} | }} |
Latest revision as of 02:52, 20 September 2015
Short description: | p12@COL1A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_COL1A2_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -69bp_to_ENST00000478215_5end |
EntrezGene: | COL1A2 |
HGNC: | 2198 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.88e-25 | 76 |
multi fate stem cell | 2.93e-22 | 427 |
somatic stem cell | 2.67e-21 | 433 |
stem cell | 4.56e-20 | 441 |
muscle precursor cell | 8.72e-15 | 58 |
myoblast | 8.72e-15 | 58 |
multi-potent skeletal muscle stem cell | 8.72e-15 | 58 |
muscle cell | 2.20e-14 | 55 |
connective tissue cell | 2.76e-12 | 361 |
electrically responsive cell | 7.52e-12 | 61 |
electrically active cell | 7.52e-12 | 61 |
smooth muscle cell | 1.07e-11 | 43 |
smooth muscle myoblast | 1.07e-11 | 43 |
mesenchymal cell | 3.17e-11 | 354 |
stromal cell | 2.84e-09 | 28 |
preadipocyte | 4.50e-09 | 12 |
vascular associated smooth muscle cell | 5.17e-09 | 32 |
skin fibroblast | 8.07e-09 | 23 |
motile cell | 2.37e-08 | 386 |
mesenchymal stem cell of adipose | 5.22e-08 | 8 |
extracellular matrix secreting cell | 7.14e-08 | 15 |
cardiocyte | 1.64e-07 | 16 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.73e-07 | 14 |