FFCP PHASE2:Hg19::chr2:216256439..216256547,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:2335 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript |HGNC=HGNC:3778 ...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=2335 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC= | |HGNC=3778 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt= |
Latest revision as of 03:05, 20 September 2015
Short description: | p5@FN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_FN1_5end |
Coexpression cluster: | C79_chorionic_Chondrocyte_Cardiac_Smooth_Fibroblast_Preadipocyte_Mesenchymal |
Association with transcript: | 458bp_to_uc002vez.2_5end |
EntrezGene: | FN1 |
HGNC: | 3778 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p5@FN1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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fibroblast | 1.04e-26 | 76 |
muscle precursor cell | 3.49e-16 | 58 |
myoblast | 3.49e-16 | 58 |
multi-potent skeletal muscle stem cell | 3.49e-16 | 58 |
muscle cell | 8.55e-15 | 55 |
multi fate stem cell | 1.93e-12 | 427 |
mesodermal cell | 2.81e-12 | 121 |
somatic stem cell | 4.14e-12 | 433 |
embryonic cell | 7.54e-12 | 250 |
electrically responsive cell | 9.69e-12 | 61 |
Showing 1 to 10 of 20 entries
Ontology term | p-value | n |
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epithelial vesicle | 7.66e-19 | 78 |
somite | 2.46e-18 | 71 |
presomitic mesoderm | 2.46e-18 | 71 |
presumptive segmental plate | 2.46e-18 | 71 |
dermomyotome | 2.46e-18 | 71 |
trunk paraxial mesoderm | 2.46e-18 | 71 |
dense mesenchyme tissue | 3.23e-18 | 73 |
trunk mesenchyme | 3.54e-18 | 122 |
paraxial mesoderm | 1.06e-17 | 72 |
presumptive paraxial mesoderm | 1.06e-17 | 72 |
Showing 1 to 10 of 61 entries