FFCP PHASE1:Hg19::chr1:205473865..205473872,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:205473865..205473872,+ to FFCP PHASE1:Hg19::chr1:205473865..205473872,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5129 | |EntrezGene=5129 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8751 | |HGNC=8751 | ||
|TSSclassifier=strong | |||
|UniProt=D6RGH0 | |UniProt=D6RGH0 | ||
|association_with_transcript=-4bp_to_ENST00000506215_5end | |||
|cluster_id=chr1:205473865..205473872,+ | |||
|description=CAGE_peak_8_at_CDK18_5end | |||
|id=chr1:205473865..205473872,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.70e-21!254;CL:0002076!6.48e-13!43;CL:0000223!1.46e-11!59;CL:0002251!2.62e-09!21 | |||
|ontology_enrichment_celltype_v019=CL:0000319;1.07e-07;1!CL:0000244;1.78e-07;4!CL:0000731;1.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,1.54e-07,1;CL:0000244,2.06e-07,4;CL:0000731,2.06e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0005754;2.99e-08;1!UBERON:0008801;4.35e-08;1!UBERON:0010227;1.07e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.71e-20!106;DOID:0050687!1.44e-15!143;DOID:1749!3.68e-10!14;DOID:162!5.88e-10!235;DOID:14566!2.72e-09!239 | |||
|ontology_enrichment_disease_v019=DOID:3030;1.07e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,1.54e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001004!4.25e-10!72;UBERON:0004119!2.08e-09!169;UBERON:0000925!2.08e-09!169;UBERON:0006595!2.08e-09!169;UBERON:0000064!1.03e-08!219;UBERON:0004121!2.50e-08!169;UBERON:0000033!3.52e-08!123;UBERON:0000062!8.54e-08!511;UBERON:0000924!9.11e-08!173;UBERON:0006601!9.11e-08!173;UBERON:0000153!1.00e-07!129;UBERON:0007811!1.00e-07!129;UBERON:0001007!2.18e-07!155;UBERON:0001555!2.18e-07!155;UBERON:0007026!2.18e-07!155;UBERON:0000161!3.69e-07!35;UBERON:0007023!6.09e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;3.67e-10;3!UBERON:0004054;3.67e-10;3!UBERON:0001000;2.99e-08;1!UBERON:0000998;2.99e-08;1!UBERON:0006868;2.99e-08;1!UBERON:0005352;2.99e-08;1!UBERON:0001831;4.35e-08;1!UBERON:0001567;4.35e-08;1!UBERON:0005904;7.97e-08;4!UBERON:0002079;1.07e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,3.36e-10,3;UBERON:0004054,3.36e-10,3;UBERON:0000998,2.70e-08,1;UBERON:0006868,2.70e-08,1;UBERON:0001000,2.89e-08,1;UBERON:0005352,2.89e-08,1;UBERON:0001831,3.55e-08,1;UBERON:0001567,3.55e-08,1;UBERON:0008801,3.55e-08,1;UBERON:0005904,7.47e-08,4;UBERON:0002079,9.72e-08,1 | |||
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| ||
|short_description=p8@CDK18 | |||
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Latest revision as of 03:06, 20 September 2015
Short description: | p8@CDK18 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDK18_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000506215_5end |
EntrezGene: | CDK18 |
HGNC: | 8751 |
UniProt: | D6RGH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 1.54e-07 | 1 |
transitional epithelial cell | 2.06e-07 | 4 |
urothelial cell | 2.06e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 3.36e-10 | 3 |
internal male genitalia | 3.36e-10 | 3 |
seminal vesicle | 2.70e-08 | 1 |
seminal fluid secreting gland | 2.70e-08 | 1 |
vas deferens | 2.89e-08 | 1 |
spermatic cord | 2.89e-08 | 1 |
parotid gland | 3.55e-08 | 1 |
cheek | 3.55e-08 | 1 |
parotid gland primordium | 3.55e-08 | 1 |
duct of male reproductive system | 7.47e-08 | 4 |
left cardiac atrium | 9.72e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 1.54e-07 | 1 |