FFCP PHASE1:Hg19::chr5:128301232..128301258,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28965 | |EntrezGene=28965 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11000 | |HGNC=11000 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=11bp_to_ENST00000506176_5end | |association_with_transcript=11bp_to_ENST00000506176_5end | ||
|cluster_id=chr5:128301232..128301258,+ | |||
|description=CAGE_peak_3_at_SLC27A6_5end | |description=CAGE_peak_3_at_SLC27A6_5end | ||
|id=chr5:128301232..128301258,+ | |id=chr5:128301232..128301258,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;2.49e-21;19!CL:0002577;5.30e-12;3!CL:0002541;1.14e-11;3!CL:0002536;3.02e-08;2!CL:0002537;2.52e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.18e-21,19;CL:0002577,5.32e-12,3;CL:0002541,1.17e-11,3;CL:0002536,2.28e-08,2;CL:0002537,2.55e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;9.53e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.51e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.33e-36!115;UBERON:0001049!1.76e-20!57;UBERON:0005068!1.76e-20!57;UBERON:0006241!1.76e-20!57;UBERON:0007135!1.76e-20!57;UBERON:0003075!9.68e-18!86;UBERON:0007284!9.68e-18!86;UBERON:0003080!6.08e-17!42;UBERON:0002616!1.05e-16!59;UBERON:0004121!1.43e-16!169;UBERON:0001017!1.94e-16!82;UBERON:0002346!2.16e-16!90;UBERON:0000478!2.90e-16!24;UBERON:0005631!3.78e-16!14;UBERON:0000158!3.78e-16!14;UBERON:0005743!4.39e-16!86;UBERON:0002780!6.91e-16!41;UBERON:0001890!6.91e-16!41;UBERON:0006240!6.91e-16!41;UBERON:0000924!8.93e-16!173;UBERON:0006601!8.93e-16!173;UBERON:0000955!9.05e-15!69;UBERON:0006238!9.05e-15!69;UBERON:0000073!3.05e-14!94;UBERON:0001016!3.05e-14!94;UBERON:0000153!2.92e-13!129;UBERON:0007811!2.92e-13!129;UBERON:0003056!4.42e-12!61;UBERON:0003124!4.75e-12!7;UBERON:0002020!5.32e-12!34;UBERON:0003528!5.32e-12!34;UBERON:0000033!1.82e-11!123;UBERON:0002791!3.42e-11!33;UBERON:0002298!7.53e-11!8;UBERON:0001893!1.04e-10!34;UBERON:0000064!6.45e-10!219;UBERON:0001869!3.96e-09!32;UBERON:0000956!9.02e-08!25;UBERON:0000203!9.02e-08!25;UBERON:0001894!1.07e-07!7;UBERON:0006222!1.07e-07!7;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0000062!1.79e-07!511;UBERON:0000468!4.55e-07!659;UBERON:0002619!6.57e-07!22 | |ontology_enrichment_uberon=UBERON:0007023!4.33e-36!115;UBERON:0001049!1.76e-20!57;UBERON:0005068!1.76e-20!57;UBERON:0006241!1.76e-20!57;UBERON:0007135!1.76e-20!57;UBERON:0003075!9.68e-18!86;UBERON:0007284!9.68e-18!86;UBERON:0003080!6.08e-17!42;UBERON:0002616!1.05e-16!59;UBERON:0004121!1.43e-16!169;UBERON:0001017!1.94e-16!82;UBERON:0002346!2.16e-16!90;UBERON:0000478!2.90e-16!24;UBERON:0005631!3.78e-16!14;UBERON:0000158!3.78e-16!14;UBERON:0005743!4.39e-16!86;UBERON:0002780!6.91e-16!41;UBERON:0001890!6.91e-16!41;UBERON:0006240!6.91e-16!41;UBERON:0000924!8.93e-16!173;UBERON:0006601!8.93e-16!173;UBERON:0000955!9.05e-15!69;UBERON:0006238!9.05e-15!69;UBERON:0000073!3.05e-14!94;UBERON:0001016!3.05e-14!94;UBERON:0000153!2.92e-13!129;UBERON:0007811!2.92e-13!129;UBERON:0003056!4.42e-12!61;UBERON:0003124!4.75e-12!7;UBERON:0002020!5.32e-12!34;UBERON:0003528!5.32e-12!34;UBERON:0000033!1.82e-11!123;UBERON:0002791!3.42e-11!33;UBERON:0002298!7.53e-11!8;UBERON:0001893!1.04e-10!34;UBERON:0000064!6.45e-10!219;UBERON:0001869!3.96e-09!32;UBERON:0000956!9.02e-08!25;UBERON:0000203!9.02e-08!25;UBERON:0001894!1.07e-07!7;UBERON:0006222!1.07e-07!7;UBERON:0001987!1.18e-07!4;UBERON:0004340!1.18e-07!4;UBERON:0000062!1.79e-07!511;UBERON:0000468!4.55e-07!659;UBERON:0002619!6.57e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.70e-26;24!UBERON:0005631;1.89e-22;10!UBERON:0000158;1.89e-22;10!UBERON:0001987;2.68e-15;4!UBERON:0000305;4.12e-13;7!UBERON:0003124;1.14e-11;3!UBERON:0000920;1.14e-11;3!UBERON:0002784;1.69e-08;4!UBERON:0003296;3.70e-08;4!UBERON:0010133;3.70e-08;4!UBERON:0001894;5.09e-08;7!UBERON:0001905;6.53e-08;2!UBERON:0002757;6.53e-08;2!UBERON:0010134;6.53e-08;2!UBERON:0005408;6.53e-08;2!UBERON:0001899;6.53e-08;2!UBERON:0007100;1.14e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.07e-35,14;UBERON:0000158,1.07e-35,14;UBERON:0000478,1.36e-26,24;UBERON:0003124,3.34e-25,7;UBERON:0001987,2.74e-15,4;UBERON:0004340,2.74e-15,4;UBERON:0000305,3.43e-13,7;UBERON:0000920,1.17e-11,3;UBERON:0004923,1.26e-11,66;UBERON:0004871,1.72e-11,8;UBERON:0007023,8.41e-09,114;UBERON:0002784,1.95e-08,4;UBERON:0003296,4.47e-08,4;UBERON:0010133,4.47e-08,4;UBERON:0001894,5.92e-08,7;UBERON:0006222,5.92e-08,7;UBERON:0001905,7.78e-08,2;UBERON:0002757,7.78e-08,2;UBERON:0010134,7.78e-08,2;UBERON:0005408,7.78e-08,2;UBERON:0001899,7.78e-08,2;UBERON:0007100,5.15e-07,27 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,14.4171305605914,2.90143676051299,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,1.1240175325762,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.00789276919316,0.567100388969546,1.25381931783988,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36567900037145,19.9722527412596,15.4219049598137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918515585316854,0.546273504020151,0.917870904715969,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.15314040419064,1.53135254993501,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,2.44773882019626,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,11.5816225524729,14.1293922965647,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0.41827123283581,0.846452843541768,0,2.76676685265672,9.60406795184562,4.34589487688032,8.93203247249374,3.48070854927077,8.52855641629816,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.86494757262552,0.939797545549098,0.876214728748802,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.93978032976839,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.788662062837943,2.51354161145029,5.72901060029209,0.717873024576814,1.59743200399193,3.43380838509257,2.00854311697685,18.6770053513099,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,8.95165523008993,0,0,0.904980694530854,0.66116300871345,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,1.33114861844223,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,26.030865575022,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0.11796972334774,0,0,0,0,0,1.27857558193737,0,0,22.0001623364395,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0.992422356778588,0,0,2.14280734351315,2.35398605553177,1.21393120847326,0.91064876540519,5.41084457992097,0,0,1.08751572762931,0.197318320688547,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,1.10609528212909,0,0,0.801711364730253,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.981542335574726,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,2.28057301820587,0,0,0.18378979906969,0,2.65225443763838,2.41167717140561,4.1458471972939,0.724030971033267,0.426467963801962,0.23806443146374,0.710478008196067,1.42771842880473,0,0.827413057616144,0,1.74173398317569,0.684466602170562,1.75115337837928,0.932388670104793,0,0,0,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,14.4171305605914,2.90143676051299,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.916853528483988,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09098448236334,0.860413786167011,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.548751427043128,1.1240175325762,0.804231779293047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.00789276919316,0.567100388969546,1.25381931783988,1.16253575405585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.36567900037145,19.9722527412596,15.4219049598137,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.918515585316854,0.546273504020151,0.917870904715969,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16386124460217,0,0,0,0,0,0,0,0,0,0,0,0,0,0.661139661443912,1.15314040419064,1.53135254993501,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0.354761064070598,0,0,0,0,0,0,0,2.44773882019626,0,0,0,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,11.5816225524729,14.1293922965647,0,0.703347082052564,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0.969332746095218,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0.219385397153973,0,0.41827123283581,0.846452843541768,0,2.76676685265672,9.60406795184562,4.34589487688032,8.93203247249374,3.48070854927077,8.52855641629816,0,0,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,1.48260564340311,0.86494757262552,0.939797545549098,0.876214728748802,0,0,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,1.93978032976839,0,0,0,0,0.316553979779393,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.547621515567972,0,0,0.788662062837943,2.51354161145029,5.72901060029209,0.717873024576814,1.59743200399193,3.43380838509257,2.00854311697685,18.6770053513099,0,0,0,0,0,0,0,0.795229689809303,0.272406812223151,0,0.275078873194468,0.415440338029185,0,0,0,0,0,0,0,0,0,2.1440859791201,2.64836788146173,0,0,0,0,0,0,0,8.95165523008993,0,0,0.904980694530854,0.66116300871345,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,1.14681839138014,1.33114861844223,0.869349641179368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607719912354764,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,26.030865575022,0.128458450192919,0,0.159633859057151,0.205116364240755,0,0.207471757392654,0,0,0,0.11796972334774,0,0,0,0,0,1.27857558193737,0,0,22.0001623364395,0,0,0,0.781078098613847,0,0.0634158101939068,0,0,0.992422356778588,0,0,2.14280734351315,2.35398605553177,1.21393120847326,0.91064876540519,5.41084457992097,0,0,1.08751572762931,0.197318320688547,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.285906176706625,1.10609528212909,0,0,0.801711364730253,0,0,0,0,0,0,0,2.06196181689645,0,0,0,0,0,0,0,1.1598144313382,1.45713297917742,0,0,0,0,0.109940516745429,0,0.0771741581079447,0.218559560503957,0,0,0,0.981542335574726,0.891139200981258,0,0,0,0,0,0,0,0,0,0,0.716697915757256,0,0.135982980381829,0,0,0,0,0,0,0,2.28057301820587,0,0,0.18378979906969,0,2.65225443763838,2.41167717140561,4.1458471972939,0.724030971033267,0.426467963801962,0.23806443146374,0.710478008196067,1.42771842880473,0,0.827413057616144,0,1.74173398317569,0.684466602170562,1.75115337837928,0.932388670104793,0,0,0,0,0,2.34640942403454,0.366724332548599,0.406896178315738,0,0.201273793591026,0 | ||
|short_description=p3@SLC27A6 | |short_description=p3@SLC27A6 | ||
}} | }} |
Latest revision as of 03:09, 20 September 2015
Short description: | p3@SLC27A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SLC27A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000506176_5end |
EntrezGene: | SLC27A6 |
HGNC: | 11000 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.18e-21 | 19 |
placental epithelial cell | 5.32e-12 | 3 |
chorionic membrane mesenchymal stem cell | 1.17e-11 | 3 |
amniotic epithelial cell | 2.28e-08 | 2 |
amnion mesenchymal stem cell | 2.55e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.07e-35 | 14 |
membranous layer | 1.07e-35 | 14 |
extraembryonic structure | 1.36e-26 | 24 |
chorion | 3.34e-25 | 7 |
placenta | 2.74e-15 | 4 |
allantois | 2.74e-15 | 4 |
amnion | 3.43e-13 | 7 |
egg chorion | 1.17e-11 | 3 |
organ component layer | 1.26e-11 | 66 |
somatic layer of lateral plate mesoderm | 1.72e-11 | 8 |
adult organism | 8.41e-09 | 114 |
regional part of diencephalon | 1.95e-08 | 4 |
gland of diencephalon | 4.47e-08 | 4 |
neuroendocrine gland | 4.47e-08 | 4 |
diencephalon | 5.92e-08 | 7 |
future diencephalon | 5.92e-08 | 7 |
pineal body | 7.78e-08 | 2 |
regional part of epithalamus | 7.78e-08 | 2 |
secretory circumventricular organ | 7.78e-08 | 2 |
circumventricular organ | 7.78e-08 | 2 |
epithalamus | 7.78e-08 | 2 |
primary circulatory organ | 5.15e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.51e-08 | 2 |