FFCP PHASE1:Hg19::chr12:6884195..6884206,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3902 | |EntrezGene=3902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6476 | |HGNC=6476 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-224bp_to_ENST00000542258_5end | |association_with_transcript=-224bp_to_ENST00000542258_5end | ||
|cluster_id=chr12:6884195..6884206,+ | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_5_at_LAG3_5end | |description=CAGE_peak_5_at_LAG3_5end | ||
|id=chr12:6884195..6884206,+ | |id=chr12:6884195..6884206,+ | ||
|ontology_enrichment_celltype=CL:0000625!2.08e-36!11;CL:0000791!4.15e-34!18;CL:0000789!4.15e-34!18;CL:0002420!4.15e-34!18;CL:0002419!4.15e-34!18;CL:0000790!4.15e-34!18;CL:0000084!6.25e-27!25;CL:0000827!6.25e-27!25;CL:0000838!1.50e-18!52;CL:0000542!4.19e-18!53;CL:0000051!4.19e-18!53;CL:0000738!3.31e-13!140;CL:0002087!5.33e-13!119;CL:0000623!4.02e-11!3;CL:0000825!4.02e-11!3;CL:0000842!1.44e-10!3;CL:0000037!2.16e-09!172;CL:0000566!2.16e-09!172;CL:0002031!4.96e-09!124;CL:0000988!1.73e-08!182;CL:0000224!5.10e-08!4;CL:0000893!1.33e-07!2;CL:0002489!1.33e-07!2;CL:0000809!1.33e-07!2;CL:0000808!1.33e-07!2;CL:0000894!1.33e-07!2;CL:0000806!1.33e-07!2;CL:0000807!1.33e-07!2;CL:0000805!1.33e-07!2;CL:0002425!1.33e-07!2;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165 | |ontology_enrichment_celltype=CL:0000625!2.08e-36!11;CL:0000791!4.15e-34!18;CL:0000789!4.15e-34!18;CL:0002420!4.15e-34!18;CL:0002419!4.15e-34!18;CL:0000790!4.15e-34!18;CL:0000084!6.25e-27!25;CL:0000827!6.25e-27!25;CL:0000838!1.50e-18!52;CL:0000542!4.19e-18!53;CL:0000051!4.19e-18!53;CL:0000738!3.31e-13!140;CL:0002087!5.33e-13!119;CL:0000623!4.02e-11!3;CL:0000825!4.02e-11!3;CL:0000842!1.44e-10!3;CL:0000037!2.16e-09!172;CL:0000566!2.16e-09!172;CL:0002031!4.96e-09!124;CL:0000988!1.73e-08!182;CL:0000224!5.10e-08!4;CL:0000893!1.33e-07!2;CL:0002489!1.33e-07!2;CL:0000809!1.33e-07!2;CL:0000808!1.33e-07!2;CL:0000894!1.33e-07!2;CL:0000806!1.33e-07!2;CL:0000807!1.33e-07!2;CL:0000805!1.33e-07!2;CL:0002425!1.33e-07!2;CL:0002032!1.51e-07!165;CL:0000837!1.51e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000625;9.33e-77;11!CL:0000791;2.04e-57;18!CL:0000789;2.04e-57;18!CL:0002419;2.04e-57;18!CL:0000084;5.19e-41;25!CL:0000623;4.10e-32;3!CL:0000542;2.89e-15;53!CL:0000767;1.07e-14;3!CL:0002127;6.26e-12;1!CL:0000911;6.26e-12;1!CL:0000814;6.26e-12;1!CL:0002087;6.78e-07;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.19e-77,11;CL:0000791,1.82e-57,18;CL:0000789,1.82e-57,18;CL:0002420,1.82e-57,18;CL:0002419,1.82e-57,18;CL:0000790,1.82e-57,18;CL:0000084,4.78e-41,25;CL:0000827,4.78e-41,25;CL:0000838,1.85e-32,52;CL:0000623,5.65e-32,3;CL:0000825,5.65e-32,3;CL:0000542,8.21e-32,53;CL:0000051,8.21e-32,53;CL:0000738,2.04e-17,136;CL:0002087,8.38e-16,115;CL:0000767,1.07e-14,3;CL:0000037,1.11e-13,168;CL:0002031,7.11e-13,120;CL:0000988,7.17e-13,177;CL:0002032,1.80e-12,161;CL:0000837,1.80e-12,161;CL:0002127,6.97e-12,1;CL:0000914,6.97e-12,1;CL:0000911,6.97e-12,1;CL:0000814,6.97e-12,1;CL:0002042,6.97e-12,1;CL:0002039,6.97e-12,1;CL:0002040,6.97e-12,1;CL:0002041,6.97e-12,1 | |||
|ontology_enrichment_development_v019=CL:0000790;2.04e-57;18!CL:0000051;2.89e-15;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!7.24e-10!15;UBERON:0000179!7.24e-10!15;UBERON:0000463!7.24e-10!15;UBERON:0002370!1.33e-07!4;UBERON:0005058!1.33e-07!4;UBERON:0009113!1.33e-07!4;UBERON:0003295!1.33e-07!4;UBERON:0005562!1.33e-07!4;UBERON:0004177!2.22e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@LAG3 | |short_description=p5@LAG3 | ||
}} | }} |
Latest revision as of 03:14, 20 September 2015
Short description: | p5@LAG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LAG3_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -224bp_to_ENST00000542258_5end |
EntrezGene: | LAG3 |
HGNC: | 6476 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.19e-77 | 11 |
mature alpha-beta T cell | 1.82e-57 | 18 |
alpha-beta T cell | 1.82e-57 | 18 |
immature T cell | 1.82e-57 | 18 |
mature T cell | 1.82e-57 | 18 |
immature alpha-beta T cell | 1.82e-57 | 18 |
T cell | 4.78e-41 | 25 |
pro-T cell | 4.78e-41 | 25 |
lymphoid lineage restricted progenitor cell | 1.85e-32 | 52 |
natural killer cell | 5.65e-32 | 3 |
pro-NK cell | 5.65e-32 | 3 |
lymphocyte | 8.21e-32 | 53 |
common lymphoid progenitor | 8.21e-32 | 53 |
leukocyte | 2.04e-17 | 136 |
nongranular leukocyte | 8.38e-16 | 115 |
basophil | 1.07e-14 | 3 |
hematopoietic stem cell | 1.11e-13 | 168 |
hematopoietic lineage restricted progenitor cell | 7.11e-13 | 120 |
hematopoietic cell | 7.17e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-12 | 161 |
innate effector T cell | 6.97e-12 | 1 |
immature NK T cell | 6.97e-12 | 1 |
effector T cell | 6.97e-12 | 1 |
mature NK T cell | 6.97e-12 | 1 |
immature NK T cell stage IV | 6.97e-12 | 1 |
immature NK T cell stage I | 6.97e-12 | 1 |
immature NK T cell stage II | 6.97e-12 | 1 |
immature NK T cell stage III | 6.97e-12 | 1 |