FFCP PHASE1:Hg19::chr19:5680543..5680554,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:5680543..5680554,- to FFCP PHASE1:Hg19::chr19:5680543..5680554,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=125988 | |EntrezGene=125988 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=33702 | |HGNC=33702 | ||
|TSSclassifier=strong | |||
|UniProt=Q5XKP0 | |UniProt=Q5XKP0 | ||
|association_with_transcript=356bp_to_ENST00000309324,NM_205767,uc002mch.1,uc002mci.1_5end | |||
|cluster_id=chr19:5680543..5680554,- | |||
|coexpression_cluster_id=C2480 | |||
|description=CAGE_peak_2_at_C19orf70_5end | |||
|id=chr19:5680543..5680554,- | |||
|ontology_enrichment_celltype=CL:0000183!4.28e-18!59;CL:0000680!6.70e-17!57;CL:0000056!6.70e-17!57;CL:0000355!6.70e-17!57;CL:0000187!3.39e-16!54;CL:0000055!3.41e-16!180;CL:0000192!2.95e-15!42;CL:0000514!2.95e-15!42;CL:0000222!6.15e-15!119;CL:0000220!2.06e-14!246;CL:0002321!4.91e-14!248;CL:0000393!7.88e-14!60;CL:0000211!7.88e-14!60;CL:0000359!2.02e-12!32;CL:0002371!5.26e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.29e-11;32!CL:0000192;6.86e-11;43!CL:0000187;2.23e-09;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,3.66e-17,58;CL:0000056,3.66e-17,58;CL:0000355,3.66e-17,58;CL:0000187,1.87e-16,55;CL:0000192,2.08e-15,43;CL:0000514,2.08e-15,43;CL:0000222,3.48e-15,121;CL:0002321,4.64e-14,250;CL:0000393,5.89e-14,61;CL:0000211,5.89e-14,61;CL:0000359,1.91e-12,32 | |||
|ontology_enrichment_development_v019=CL:0000514;6.86e-11;43!CL:0000355;7.66e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.13e-21!83;UBERON:0002329!4.13e-21!83;UBERON:0003077!4.13e-21!83;UBERON:0003059!4.13e-21!83;UBERON:0007282!4.13e-21!83;UBERON:0009618!4.13e-21!83;UBERON:0007285!4.13e-21!83;UBERON:0000486!1.23e-20!82;UBERON:0004290!4.39e-20!70;UBERON:0005256!5.26e-20!143;UBERON:0001134!4.22e-19!61;UBERON:0002036!4.22e-19!61;UBERON:0003082!4.22e-19!61;UBERON:0002385!4.17e-18!63;UBERON:0001015!4.17e-18!63;UBERON:0000383!4.17e-18!63;UBERON:0003104!2.05e-15!238;UBERON:0009142!2.05e-15!238;UBERON:0002100!6.72e-15!216;UBERON:0000119!2.33e-14!312;UBERON:0000483!3.77e-14!309;UBERON:0000481!7.47e-14!347;UBERON:0000490!9.74e-12!138;UBERON:0000475!2.74e-11!365;UBERON:0002049!3.39e-11!79;UBERON:0007798!3.39e-11!79;UBERON:0003914!2.68e-10!118;UBERON:0004872!6.06e-10!84;UBERON:0001637!7.92e-10!42;UBERON:0003509!7.92e-10!42;UBERON:0004572!7.92e-10!42;UBERON:0001981!1.27e-09!60;UBERON:0007500!1.27e-09!60;UBERON:0004537!1.27e-09!60;UBERON:0006965!1.27e-09!60;UBERON:0000055!5.80e-09!69;UBERON:0003103!2.14e-08!69;UBERON:0004573!1.20e-07!33;UBERON:0004571!1.20e-07!33;UBERON:0001009!7.68e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.99e-08;31!UBERON:0001015;1.99e-08;31!UBERON:0000383;1.99e-08;31!UBERON:0001637;7.90e-07;42!UBERON:0003509;7.90e-07;42!UBERON:0004572;7.90e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,7.05e-23,78;UBERON:0000486,6.40e-21,83;UBERON:0002329,2.32e-20,71;UBERON:0003059,2.32e-20,71;UBERON:0007282,2.32e-20,71;UBERON:0004290,2.32e-20,71;UBERON:0009618,2.32e-20,71;UBERON:0003077,2.74e-20,72;UBERON:0007285,2.74e-20,72;UBERON:0007524,2.97e-20,73;UBERON:0001134,2.27e-19,62;UBERON:0002036,2.27e-19,62;UBERON:0003082,2.27e-19,62;UBERON:0003104,8.22e-19,160;UBERON:0009142,8.22e-19,160;UBERON:0002385,2.25e-18,64;UBERON:0001015,2.25e-18,64;UBERON:0000383,2.25e-18,64;UBERON:0005256,3.19e-16,122;UBERON:0000119,4.36e-15,309;UBERON:0000483,7.10e-15,306;UBERON:0002100,1.55e-13,199;UBERON:0000490,4.66e-13,148;UBERON:0002049,1.76e-11,78;UBERON:0007798,1.76e-11,78;UBERON:0004872,3.50e-10,83;UBERON:0003914,4.01e-10,117;UBERON:0007500,6.30e-10,59;UBERON:0001981,6.30e-10,59;UBERON:0004537,6.30e-10,59;UBERON:0006965,6.30e-10,59;UBERON:0001637,7.59e-10,42;UBERON:0003509,7.59e-10,42;UBERON:0004572,7.59e-10,42;UBERON:0000055,3.19e-09,68;UBERON:0003103,2.42e-08,68;UBERON:0004573,1.16e-07,33;UBERON:0004571,1.16e-07,33;UBERON:0006554,1.65e-07,47;UBERON:0001008,3.12e-07,48;UBERON:0001009,3.76e-07,112 | |||
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| ||
|short_description=p2@C19orf70 | |||
}} | }} |
Latest revision as of 03:53, 20 September 2015
Short description: | p2@C19orf70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C19orf70_5end |
Coexpression cluster: | C2480_Mesenchymal_liposarcoma_skeletal_Alveolar_heart_left_Osteoblast |
Association with transcript: | 356bp_to_ENST00000309324, NM_205767, uc002mch.1, uc002mci.1_5end |
EntrezGene: | C19orf70 |
HGNC: | 33702 |
UniProt: | Q5XKP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 3.66e-17 | 58 |
myoblast | 3.66e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.66e-17 | 58 |
muscle cell | 1.87e-16 | 55 |
smooth muscle cell | 2.08e-15 | 43 |
smooth muscle myoblast | 2.08e-15 | 43 |
mesodermal cell | 3.48e-15 | 121 |
embryonic cell | 4.64e-14 | 250 |
electrically responsive cell | 5.89e-14 | 61 |
electrically active cell | 5.89e-14 | 61 |
vascular associated smooth muscle cell | 1.91e-12 | 32 |