FFCP PHASE1:Hg19::chr9:113801199..113801255,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:113801199..113801255,-
|short_description=p5@LPAR1
|description=CAGE_peak_5_at_LPAR1_5end
|association_with_transcript=-218bp_to_ENST00000538760,uc011lwo.1...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1902 | |EntrezGene=1902 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3166 | |HGNC=3166 | ||
|TSSclassifier=strong | |||
|UniProt=B4DQ18 | |UniProt=B4DQ18 | ||
|association_with_transcript=-218bp_to_ENST00000538760,uc011lwo.1_5end | |||
|cluster_id=chr9:113801199..113801255,- | |||
|description=CAGE_peak_5_at_LPAR1_5end | |||
|id=chr9:113801199..113801255,- | |||
|ontology_enrichment_celltype=CL:0000055!1.59e-20!180;CL:0000057!1.04e-18!75;CL:0000680!2.19e-10!57;CL:0000056!2.19e-10!57;CL:0000355!2.19e-10!57;CL:0002620!9.74e-10!23;CL:0000187!2.64e-09!54;CL:0000192!7.62e-09!42;CL:0000514!7.62e-09!42;CL:0000183!2.76e-08!59;CL:0000359!1.57e-07!32;CL:0000393!7.84e-07!60;CL:0000211!7.84e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.18e-11;23!CL:0000057;9.08e-09;73!CL:0002334;2.33e-07;12!CL:0000359;3.16e-07;32!CL:0002320;5.41e-07;188!CL:0000192;5.49e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.60e-21,76;CL:0002620,1.82e-11,23;CL:0000680,3.14e-11,58;CL:0000056,3.14e-11,58;CL:0000355,3.14e-11,58;CL:0000048,5.61e-10,427;CL:0000187,5.76e-10,55;CL:0000723,7.00e-10,433;CL:0000192,1.01e-09,43;CL:0000514,1.01e-09,43;CL:0000034,8.64e-09,441;CL:0000359,5.43e-08,32;CL:0002334,9.88e-08,12;CL:0000393,1.09e-07,61;CL:0000211,1.09e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;5.49e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!8.99e-16!83;UBERON:0002329!8.99e-16!83;UBERON:0003077!8.99e-16!83;UBERON:0003059!8.99e-16!83;UBERON:0007282!8.99e-16!83;UBERON:0009618!8.99e-16!83;UBERON:0007285!8.99e-16!83;UBERON:0000475!9.75e-16!365;UBERON:0003102!8.15e-15!95;UBERON:0000468!6.16e-14!659;UBERON:0000486!3.97e-12!82;UBERON:0004290!1.76e-11!70;UBERON:0000467!9.21e-11!625;UBERON:0000480!1.04e-10!626;UBERON:0002385!1.94e-10!63;UBERON:0001015!1.94e-10!63;UBERON:0000383!1.94e-10!63;UBERON:0001134!2.63e-10!61;UBERON:0002036!2.63e-10!61;UBERON:0003082!2.63e-10!61;UBERON:0002199!6.11e-09!45;UBERON:0002416!6.11e-09!45;UBERON:0000479!6.92e-09!787;UBERON:0002050!1.25e-08!605;UBERON:0005423!1.25e-08!605;UBERON:0002204!2.03e-08!167;UBERON:0000923!2.14e-08!604;UBERON:0005291!2.14e-08!604;UBERON:0006598!2.14e-08!604;UBERON:0002532!2.14e-08!604;UBERON:0000922!3.47e-08!612;UBERON:0005256!3.52e-08!143;UBERON:0000481!2.23e-07!347;UBERON:0002097!3.40e-07!40;UBERON:0000033!6.06e-07!123;UBERON:0000062!8.07e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0002199;7.81e-08;46!UBERON:0002416;7.81e-08;46!UBERON:0002384;1.02e-07;198!UBERON:0001013;2.07e-07;14!UBERON:0004457;2.44e-07;9!UBERON:0000042;2.44e-07;9!UBERON:0002097;4.96e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,1.50e-12,99;UBERON:0007524,2.53e-12,73;UBERON:0002329,3.26e-12,71;UBERON:0003059,3.26e-12,71;UBERON:0007282,3.26e-12,71;UBERON:0004290,3.26e-12,71;UBERON:0009618,3.26e-12,71;UBERON:0003077,8.55e-12,72;UBERON:0007285,8.55e-12,72;UBERON:0000486,1.03e-11,83;UBERON:0002385,3.91e-11,64;UBERON:0001015,3.91e-11,64;UBERON:0000383,3.91e-11,64;UBERON:0001134,5.77e-11,62;UBERON:0002036,5.77e-11,62;UBERON:0003082,5.77e-11,62;UBERON:0002199,6.92e-11,46;UBERON:0002416,6.92e-11,46;UBERON:0007503,1.46e-09,78;UBERON:0002097,9.27e-09,41;UBERON:0002204,3.01e-08,167;UBERON:0001013,1.28e-07,14;UBERON:0000479,1.37e-07,773 | |||
|phase1_expression=8.3572054464456,4.49611100171065,8.88012745804618,5.00366491765652,4.46961094427288,2.61701557230111,5.06599756336621,6.94891860769514,3.13422753839806,0.491467873003018,0,0.218441372130172,0.527533956456907,5.19818682432196,5.63375538737457,1.34465029290355,1.80808358407193,2.92124036154949,3.41552959153355,0.369363174230364,0.612002073732759,0.313454721478088,0,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.550975469195755,0,0,0,2.75826367343678,0.90361775633475,0,0,0,0.293600439334847,1.10799081706375,0,0.217010870715852,1.34349284543955,1.94336199611388,2.57575567634187,0.145398238779565,0,0,1.16214518452842,0,0.619412741790207,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,2.70852973188684,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,0.290209238628584,1.70215567407342,0.622822248995575,0.75374599577023,0,1.52032191293582,1.21079900526674,1.10483290796269,1.26584954976354,0,0,0.628975936525128,1.23561494261145,0.150176892841506,1.6072558669708,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,3.97583067623023,2.50668955317945,4.05570253090306,0,6.8128881842369,0.378139268656271,0,0.702678285545008,0.72038491523742,0.364295288292542,0.370784442784429,1.62273696827342,0.348259474598534,1.19662164466979,0.238490624305342,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,5.96366342034382,3.03913227994991,2.91300197789081,0.860509862246441,0.709336764396714,1.12135520028461,0,0,2.17847724779836,1.48181739276657,0.326923806226917,0.908144565869588,4.60940739583999,1.64025002283658,4.05808099879417,1.1409436430889,4.93180645820944,1.87895197830024,2.10434827678571,1.12360645361799,8.16616685019573,2.57952066354713,7.43945624465511,5.94001428641027,7.91254173691382,1.82032272387605,2.15585442544872,4.04006673489759,3.00284447692714,10.2513722729148,4.82875382968922,5.82326812018137,7.21142682751665,0.567160915800105,1.97328599257748,2.98980344345994,5.93409323246773,3.30100205692843,3.40073346486848,2.57640540045629,6.14185625894246,3.03797398034279,3.02054715999716,1.7670364197088,4.32634523618807,2.26304479546337,2.13005755509969,2.61955455391865,3.39121184620975,1.15956511897978,1.63647672354501,1.14721838155602,0,0.132529768321485,0,0,0,0,3.12899064659632,0.643240938192885,0,6.96551892047969,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.491953754172454,0.514703430895577,1.64625428112938,1.1240175325762,0.603173834469785,1.01847289674383,2.28065813717227,1.03993478527958,0,0,0.70445216541493,0,0,0,0,0,2.21595305478658,1.63802985597466,1.78357394746474,0.93733833986777,1.17587489739202,0.708875486211932,0,0.581267877027924,0,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,1.12131084345361,0,1.3200891447771,2.45616259939778,3.57656445851882,1.690605505112,2.39344304926383,2.08014873822732,0.257207374262142,1.41849132023278,2.93064396917709,3.43147184779554,3.25572963234866,1.64648067356154,1.95441710576241,4.26470338491055,2.37585561880029,1.50719688529793,0.871533458600294,1.09970290300263,0,2.00902836572851,2.10833939483032,1.4377491329495,2.29723871668228,1.42636905040718,3.76431397335706,2.67119219315498,3.22309733831812,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,5.39842563564216,2.50085260529839,2.98391526069709,5.8231841228626,4.63915370872621,2.99634588564476,3.98280810975225,7.22270639346525,6.82222512167955,3.10419213877515,7.3064815838898,1.29058417979192,5.21301686808497,0.979005787313703,1.37257369524342,0.413536052245775,0,0.533637789017222,0.303127571446259,1.66435439510497,0.604780586659361,3.72161711728165,3.99001130548962,6.73584226639377,6.53509661204075,4.09365799253363,4.3430558708774,2.96836132889982,1.69630663182921,2.13074070375753,3.94210348866284,3.11552657510173,1.74315567689939,0.604297247958111,0.200506470303285,0.276242966807689,3.4444334449382,3.82391452814106,4.72047893853927,0,0.231046011313244,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.515205058238611,0.366277859273374,0.247528499761764,2.29706215198469,0.650060246036521,1.6068392984416,2.61010939388729,0.616194468458578,0.767518373630648,1.92971201478343,2.57808587683857,2.32026710262766,1.10794615640931,2.31483292681517,0.991709492165869,0.768760269460425,1.91419068741876,0.2023155617111,2.78907329578371,5.98143458978216,2.0911118104818,0.616067160352178,0.532306030317022,0,2.03856641014312,3.00562262158182,1.86079184679834,3.48017367190598,3.62197368455267,0.511795582622668,5.13526785640705,1.90921948755562,0,2.51821440616641,1.64722217841633,2.47406044925942,0.808729926293264,1.58510321173008,1.26377536871694,0.48763373908959,5.36169677188826,2.11300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|phase1_expression=8.3572054464456,4.49611100171065,8.88012745804618,5.00366491765652,4.46961094427288,2.61701557230111,5.06599756336621,6.94891860769514,3.13422753839806,0.491467873003018,0,0.218441372130172,0.527533956456907,5.19818682432196,5.63375538737457,1.34465029290355,1.80808358407193,2.92124036154949,3.41552959153355,0.369363174230364,0.612002073732759,0.313454721478088,0,0.273748850145768,0.376627918784408,0.229240217243854,0.164201178899891,0.550975469195755,0,0,0,2.75826367343678,0.90361775633475,0,0,0,0.293600439334847,1.10799081706375,0,0.217010870715852,1.34349284543955,1.94336199611388,2.57575567634187,0.145398238779565,0,0,1.16214518452842,0,0.619412741790207,0.28769239232215,0.512321413058201,0.47296445977717,0.344745680736619,0.645484683583826,2.70852973188684,0.188242339542605,0,0.224723484445085,0.612167784741805,0.320929027076094,0.639337125799041,0.659702600373432,0.598390972864896,1.27867425159808,0.290209238628584,1.70215567407342,0.622822248995575,0.75374599577023,0,1.52032191293582,1.21079900526674,1.10483290796269,1.26584954976354,0,0,0.628975936525128,1.23561494261145,0.150176892841506,1.6072558669708,0,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04580098949649,3.97583067623023,2.50668955317945,4.05570253090306,0,6.8128881842369,0.378139268656271,0,0.702678285545008,0.72038491523742,0.364295288292542,0.370784442784429,1.62273696827342,0.348259474598534,1.19662164466979,0.238490624305342,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,1.31780417436063,3.87780264148325,0.436094052142534,5.96366342034382,3.03913227994991,2.91300197789081,0.860509862246441,0.709336764396714,1.12135520028461,0,0,2.17847724779836,1.48181739276657,0.326923806226917,0.908144565869588,4.60940739583999,1.64025002283658,4.05808099879417,1.1409436430889,4.93180645820944,1.87895197830024,2.10434827678571,1.12360645361799,8.16616685019573,2.57952066354713,7.43945624465511,5.94001428641027,7.91254173691382,1.82032272387605,2.15585442544872,4.04006673489759,3.00284447692714,10.2513722729148,4.82875382968922,5.82326812018137,7.21142682751665,0.567160915800105,1.97328599257748,2.98980344345994,5.93409323246773,3.30100205692843,3.40073346486848,2.57640540045629,6.14185625894246,3.03797398034279,3.02054715999716,1.7670364197088,4.32634523618807,2.26304479546337,2.13005755509969,2.61955455391865,3.39121184620975,1.15956511897978,1.63647672354501,1.14721838155602,0,0.132529768321485,0,0,0,0,3.12899064659632,0.643240938192885,0,6.96551892047969,6.49691533502627,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0.491953754172454,0.514703430895577,1.64625428112938,1.1240175325762,0.603173834469785,1.01847289674383,2.28065813717227,1.03993478527958,0,0,0.70445216541493,0,0,0,0,0,2.21595305478658,1.63802985597466,1.78357394746474,0.93733833986777,1.17587489739202,0.708875486211932,0,0.581267877027924,0,0,0,0,0,0,0.126995788584338,0,0,0,0.308482478109971,0,0.285826432630578,1.12131084345361,0,1.3200891447771,2.45616259939778,3.57656445851882,1.690605505112,2.39344304926383,2.08014873822732,0.257207374262142,1.41849132023278,2.93064396917709,3.43147184779554,3.25572963234866,1.64648067356154,1.95441710576241,4.26470338491055,2.37585561880029,1.50719688529793,0.871533458600294,1.09970290300263,0,2.00902836572851,2.10833939483032,1.4377491329495,2.29723871668228,1.42636905040718,3.76431397335706,2.67119219315498,3.22309733831812,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,5.39842563564216,2.50085260529839,2.98391526069709,5.8231841228626,4.63915370872621,2.99634588564476,3.98280810975225,7.22270639346525,6.82222512167955,3.10419213877515,7.3064815838898,1.29058417979192,5.21301686808497,0.979005787313703,1.37257369524342,0.413536052245775,0,0.533637789017222,0.303127571446259,1.66435439510497,0.604780586659361,3.72161711728165,3.99001130548962,6.73584226639377,6.53509661204075,4.09365799253363,4.3430558708774,2.96836132889982,1.69630663182921,2.13074070375753,3.94210348866284,3.11552657510173,1.74315567689939,0.604297247958111,0.200506470303285,0.276242966807689,3.4444334449382,3.82391452814106,4.72047893853927,0,0.231046011313244,0,0,0.316654886678627,0,0,0.431831832204279,0,0,0.501689773854853,0,0,0.223874754722178,0,0,0,0,0.325378394664303,0.515205058238611,0.366277859273374,0.247528499761764,2.29706215198469,0.650060246036521,1.6068392984416,2.61010939388729,0.616194468458578,0.767518373630648,1.92971201478343,2.57808587683857,2.32026710262766,1.10794615640931,2.31483292681517,0.991709492165869,0.768760269460425,1.91419068741876,0.2023155617111,2.78907329578371,5.98143458978216,2.0911118104818,0.616067160352178,0.532306030317022,0,2.03856641014312,3.00562262158182,1.86079184679834,3.48017367190598,3.62197368455267,0.511795582622668,5.13526785640705,1.90921948755562,0,2.51821440616641,1.64722217841633,2.47406044925942,0.808729926293264,1.58510321173008,1.26377536871694,0.48763373908959,5.36169677188826,2.11300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| ||
|short_description=p5@LPAR1 | |||
}} | }} |
Latest revision as of 04:06, 20 September 2015
Short description: | p5@LPAR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LPAR1_5end |
Coexpression cluster: | NA |
Association with transcript: | -218bp_to_ENST00000538760, uc011lwo.1_5end |
EntrezGene: | LPAR1 |
HGNC: | 3166 |
UniProt: | B4DQ18 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.60e-21 | 76 |
skin fibroblast | 1.82e-11 | 23 |
muscle precursor cell | 3.14e-11 | 58 |
myoblast | 3.14e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.14e-11 | 58 |
multi fate stem cell | 5.61e-10 | 427 |
muscle cell | 5.76e-10 | 55 |
somatic stem cell | 7.00e-10 | 433 |
smooth muscle cell | 1.01e-09 | 43 |
smooth muscle myoblast | 1.01e-09 | 43 |
stem cell | 8.64e-09 | 441 |
vascular associated smooth muscle cell | 5.43e-08 | 32 |
preadipocyte | 9.88e-08 | 12 |
electrically responsive cell | 1.09e-07 | 61 |
electrically active cell | 1.09e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
surface structure | 1.50e-12 | 99 |
dense mesenchyme tissue | 2.53e-12 | 73 |
somite | 3.26e-12 | 71 |
presomitic mesoderm | 3.26e-12 | 71 |
presumptive segmental plate | 3.26e-12 | 71 |
dermomyotome | 3.26e-12 | 71 |
trunk paraxial mesoderm | 3.26e-12 | 71 |
paraxial mesoderm | 8.55e-12 | 72 |
presumptive paraxial mesoderm | 8.55e-12 | 72 |
multilaminar epithelium | 1.03e-11 | 83 |
muscle tissue | 3.91e-11 | 64 |
musculature | 3.91e-11 | 64 |
musculature of body | 3.91e-11 | 64 |
skeletal muscle tissue | 5.77e-11 | 62 |
striated muscle tissue | 5.77e-11 | 62 |
myotome | 5.77e-11 | 62 |
integument | 6.92e-11 | 46 |
integumental system | 6.92e-11 | 46 |
epithelial vesicle | 1.46e-09 | 78 |
skin of body | 9.27e-09 | 41 |
musculoskeletal system | 3.01e-08 | 167 |
adipose tissue | 1.28e-07 | 14 |
tissue | 1.37e-07 | 773 |