FFCP PHASE1:Hg19::chr5:131563450..131563462,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8974 | |EntrezGene=8974 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8547 | |HGNC=8547 | ||
|TSSclassifier=strong | |||
|UniProt=E7ENX0 | |UniProt=E7ENX0 | ||
|association_with_transcript=24bp_to_ENST00000417528_5end | |association_with_transcript=24bp_to_ENST00000417528_5end | ||
|cluster_id=chr5:131563450..131563462,- | |||
|description=CAGE_peak_3_at_P4HA2_5end | |description=CAGE_peak_3_at_P4HA2_5end | ||
|id=chr5:131563450..131563462,- | |id=chr5:131563450..131563462,- | ||
|ontology_enrichment_celltype=CL:0000066!1.15e-13!254;CL:0002321!4.20e-10!248;CL:0000220!7.20e-10!246;CL:0002076!1.07e-09!43;CL:0000359!3.71e-09!32;CL:0000055!1.01e-08!180;CL:0000192!1.48e-08!42;CL:0000514!1.48e-08!42;CL:0000223!5.58e-08!59;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000183!8.94e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.15e-13!254;CL:0002321!4.20e-10!248;CL:0000220!7.20e-10!246;CL:0002076!1.07e-09!43;CL:0000359!3.71e-09!32;CL:0000055!1.01e-08!180;CL:0000192!1.48e-08!42;CL:0000514!1.48e-08!42;CL:0000223!5.58e-08!59;CL:0000680!1.92e-07!57;CL:0000056!1.92e-07!57;CL:0000355!1.92e-07!57;CL:0000183!8.94e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000349;7.89e-10;19!CL:0000359;2.75e-09;32!CL:0000134;2.44e-07;55!CL:0002076;3.99e-07;42!CL:0000048;9.88e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.01e-09,19;CL:0000359,1.59e-09,32;CL:0002321,2.67e-09,250;CL:0002076,8.98e-09,42;CL:0000192,2.55e-08,43;CL:0000514,2.55e-08,43;CL:0000066,8.76e-08,253;CL:0000223,1.47e-07,58;CL:0000680,2.58e-07,58;CL:0000056,2.58e-07,58;CL:0000355,2.58e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.67e-09!14;DOID:120!3.71e-08!27;DOID:193!6.49e-08!29 | |||
|ontology_enrichment_disease_v019=DOID:2394;4.37e-11;14!DOID:193;2.58e-07;29!DOID:120;3.20e-07;27 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.54e-11,14;DOID:193,2.10e-07,29;DOID:120,2.50e-07,27 | |||
|ontology_enrichment_uberon=UBERON:0005156!6.67e-12!59;UBERON:0000990!6.67e-12!59;UBERON:0003104!2.69e-11!238;UBERON:0009142!2.69e-11!238;UBERON:0003100!3.05e-11!41;UBERON:0002100!9.76e-11!216;UBERON:0003133!4.89e-10!48;UBERON:0000475!9.07e-10!365;UBERON:0003134!1.11e-09!37;UBERON:0000474!1.11e-09!37;UBERON:0000481!1.22e-09!347;UBERON:0004119!1.50e-09!169;UBERON:0000925!1.50e-09!169;UBERON:0006595!1.50e-09!169;UBERON:0001048!1.64e-09!168;UBERON:0000466!2.08e-09!126;UBERON:0005256!8.40e-09!143;UBERON:0000468!2.24e-08!659;UBERON:0005631!4.62e-08!14;UBERON:0000158!4.62e-08!14;UBERON:0000464!6.80e-08!104;UBERON:0000486!9.02e-08!82;UBERON:0005911!1.57e-07!82;UBERON:0000467!1.82e-07!625;UBERON:0000480!2.63e-07!626;UBERON:0001637!4.16e-07!42;UBERON:0003509!4.16e-07!42;UBERON:0004572!4.16e-07!42;UBERON:0004573!6.01e-07!33;UBERON:0004571!6.01e-07!33;UBERON:0004176!6.52e-07!22;UBERON:0009569!9.76e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0003100;1.84e-07;41!UBERON:0000478;1.96e-07;24!UBERON:0005631;3.61e-07;10!UBERON:0000158;3.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.42e-10,14;UBERON:0000158,4.42e-10,14;UBERON:0003100,4.58e-10,41;UBERON:0005156,9.50e-10,59;UBERON:0000990,9.50e-10,59;UBERON:0003133,3.98e-09,48;UBERON:0003134,9.37e-09,37;UBERON:0000474,9.37e-09,37;UBERON:0001637,7.78e-08,42;UBERON:0003509,7.78e-08,42;UBERON:0004572,7.78e-08,42;UBERON:0000486,1.21e-07,83;UBERON:0000478,2.15e-07,24;UBERON:0003914,3.08e-07,117;UBERON:0004573,3.12e-07,33;UBERON:0004571,3.12e-07,33;UBERON:0005256,3.76e-07,122;UBERON:0003124,7.50e-07,7;UBERON:0002100,9.53e-07,199 | |||
|phase1_expression=0,0.856402095563933,0.704772020479856,0,0.893922188854576,2.61701557230111,2.53299878168311,1.26343974685366,0,9.58362352355885,3.48900583986214,19.6597234917155,12.3970479767373,0.123766352960047,0,1.34465029290355,4.21886169616784,0.730310090387373,3.41552959153355,1.35433163884467,1.02000345622126,3.76145665773705,0.572471974262113,0,0,0,0,0,0,0,0.154816123316076,0.919421224478927,3.31326510656075,2.21852406100073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.69465420536006,1.44575660953827,0.50133791063589,0.434539556882471,0.795285947051099,3.89307896242109,3.97046232089085,4.65631734671384,2.19586964232815,0.589405839739707,3.27865759463288,1.48313777113772,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61131726843659,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0,0,0,2.61656431285521,3.47880366186723,1.2663051166458,10.1955069226178,4.58938593198102,0.709336764396714,1.12135520028461,3.20246987189115,5.67335361359468,0,0.808264032418128,0.163461903113459,0.605429710579726,0.576175924479999,0.234321431833797,0.312160076830321,0,0.149448680551801,0.704606991862589,0,0,0.204154171254893,0,0.103325781175765,0,0,0,1.43723628363248,0,0,0.277064115484183,0,0,0.300476117813194,0.567160915800105,1.61450672119976,0.640672166455702,0.635795703478686,3.30100205692843,0.412210116953756,4.3798891807757,2.79175284497385,1.85653965465393,3.02054715999716,2.77677151668526,0.736399189138395,0.484938170456436,3.55009592516614,1.0075209822764,1.86516651541536,18.1665201973499,26.1836275767201,6.88331028933609,1.09776335516636,0.795178609928912,2.09149097165133,1.45125477021519,3.78481276313443,0.72995471815166,15.6449532329816,1.28648187638577,0,0,0.721879481669586,0.946454400318751,0.337169380156203,1.44606617930089,0.992645754591546,0.435758888184812,1.42362371466658,0.539325232640658,0.588664395376038,0,0,0,9.0546282492908,13.2307840246988,0,0,0,0,3.32068784066407,3.25978839567199,9.54827483055042,1.1240175325762,0.603173834469785,0.740707561268237,0.325808305310325,0,0,0.927443239800615,3.28744343860301,0.721832238805369,3.24089858803628,1.52203321787679,0.790204397959275,0,0,0,0,13.1227367581488,58.2897984850043,14.6028350159658,4.29880908973672,4.65014301622339,6.9008882249738,0,0,1.24396869324463,0,0.37872730027914,0.253991577168676,0.381988425558278,0,0,0,0,0,0.448524337381443,0.43596006883328,0.36669142910475,2.32689088364,0,0,0.26593811658487,1.04007436911366,0,0,0.532844358032199,5.14720777169331,3.7983512377401,2.46972101034231,0.325736184293735,7.10783897485092,0,6.33022691825131,3.48613383440118,2.7992437530976,0,0,0,1.4377491329495,0,0,7.09428402671138,0.61642896765115,8.41586527227509,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0.500170521059677,0,0.831883446123229,0.535286966391485,0.315404830067869,0.468565659970853,1.80567659836631,2.27407504055985,2.0694614258501,0,0.368738337083406,1.04260337361699,0.391602314925481,0.686286847621712,0,0,0,17.2782715724368,18.3078983461547,18.1434175997808,1.73675465473144,4.45039722535381,1.68396056659844,1.40953064181271,3.58195074346692,4.3430558708774,1.48418066444991,1.07946785661859,1.59805552781814,1.39616165223476,0.519254429183621,1.04589340613963,2.90062679019893,36.8931905358044,4.14364450211533,0.574072240823034,0.364182336013434,1.44236856455367,1.80479845162965,1.15523005656622,1.56869953835371,0,2.53323909342902,0,0.510281115829547,0.215915916102139,0,0.541892875087706,1.00337954770971,1.78413391131527,0,1.34324852833307,0,0,0,0,0.325378394664303,4.53380451249978,0.27470839445503,0.742585499285292,4.01985876597321,5.20048196829217,1.6068392984416,1.25671933779759,0.308097234229289,0.460511024178389,0,0,0,0.340906509664404,4.00644160410318,8.42953068340988,8.07198282933446,4.08360679982669,8.90188471528839,2.32422774648643,21.7220519313142,1.3940745403212,13.5534775277479,6.38767236380426,0.869932992075073,2.22389062924704,4.43687148900173,0,0,0.762520775695299,1.535386747868,0.855877976067841,0.95460974377781,11.7742296029885,0.719489830333259,0.823611089208164,1.29593642580255,8.28948174450596,0,3.79132610615083,0,7.31140468893853,7.39551027297288,1.09199929126389,3.25232493493539,2.26016233240486,6.06501877900737,4.64407282668854,7.0152141640602,0,0,8.31932545547087,2.78841148289775,1.12678241012897,0.143411352204052,0.392996164052485,7.133421029625,1.77380532035299,0.422215270595328,0.329294892959902,0.379473173765715,0,1.44333169088268,2.01090682660736,6.53345909167936,3.67160823029439,10.7626343167807,3.36942951335251,7.09488245658681,5.74308500517399,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0.121360521749513,0,0,5.96861211844225,11.2846578716403,6.45037474408387,0,0,0.222617410045812,0,0,0.996239941255349,0,3.27512572210559,0,0,4.043514639603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| ||
|short_description=p3@P4HA2 | |short_description=p3@P4HA2 | ||
}} | }} |
Latest revision as of 04:29, 20 September 2015
Short description: | p3@P4HA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_P4HA2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000417528_5end |
EntrezGene: | P4HA2 |
HGNC: | 8547 |
UniProt: | E7ENX0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.01e-09 | 19 |
vascular associated smooth muscle cell | 1.59e-09 | 32 |
embryonic cell | 2.67e-09 | 250 |
endo-epithelial cell | 8.98e-09 | 42 |
smooth muscle cell | 2.55e-08 | 43 |
smooth muscle myoblast | 2.55e-08 | 43 |
epithelial cell | 8.76e-08 | 253 |
endodermal cell | 1.47e-07 | 58 |
muscle precursor cell | 2.58e-07 | 58 |
myoblast | 2.58e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.58e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.42e-10 | 14 |
membranous layer | 4.42e-10 | 14 |
female organism | 4.58e-10 | 41 |
reproductive structure | 9.50e-10 | 59 |
reproductive system | 9.50e-10 | 59 |
reproductive organ | 3.98e-09 | 48 |
female reproductive organ | 9.37e-09 | 37 |
female reproductive system | 9.37e-09 | 37 |
artery | 7.78e-08 | 42 |
arterial blood vessel | 7.78e-08 | 42 |
arterial system | 7.78e-08 | 42 |
multilaminar epithelium | 1.21e-07 | 83 |
extraembryonic structure | 2.15e-07 | 24 |
epithelial tube | 3.08e-07 | 117 |
systemic artery | 3.12e-07 | 33 |
systemic arterial system | 3.12e-07 | 33 |
trunk mesenchyme | 3.76e-07 | 122 |
chorion | 7.50e-07 | 7 |
trunk | 9.53e-07 | 199 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.54e-11 | 14 |
reproductive organ cancer | 2.10e-07 | 29 |
female reproductive organ cancer | 2.50e-07 | 27 |