FFCP PHASE1:Hg19::chr14:51955760..51955769,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-48bp_to_ENST00000556137_5end | |association_with_transcript=-48bp_to_ENST00000556137_5end | ||
|cluster_id=chr14:51955760..51955769,+ | |||
|coexpression_cluster_id=C362 | |||
|description=CAGE_peak_29_at_FRMD6_5end | |description=CAGE_peak_29_at_FRMD6_5end | ||
|id=chr14:51955760..51955769,+ | |id=chr14:51955760..51955769,+ | ||
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|ontology_enrichment_development_v019=CL:0000357;6.12e-13;6!CL:0000114;6.12e-13;6 | |||
|ontology_enrichment_disease=DOID:1749!2.52e-19!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p29@FRMD6 | |short_description=p29@FRMD6 | ||
}} | }} |
Latest revision as of 04:45, 20 September 2015
Short description: | p29@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_FRMD6_5end |
Coexpression cluster: | C362_Small_Mallassezderived_Urothelial_Gingival_Prostate_Keratinocyte_Tracheal |
Association with transcript: | -48bp_to_ENST00000556137_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.42e-36 | 2 |
epithelial cell of sweat gland | 1.42e-36 | 2 |
epithelial cell of skin gland | 1.42e-36 | 2 |
acinar cell of sebaceous gland | 1.42e-36 | 2 |
general ecto-epithelial cell | 4.43e-32 | 14 |
epithelial cell of Malassez | 2.99e-25 | 3 |
gingival epithelial cell | 8.95e-25 | 3 |
buccal mucosa cell | 3.25e-19 | 1 |
endothelial cell of viscerocranial mucosa | 3.25e-19 | 1 |
keratinized cell of the oral mucosa | 3.25e-19 | 1 |
transitional epithelial cell | 3.26e-19 | 4 |
urothelial cell | 3.26e-19 | 4 |
epidermal cell | 1.90e-18 | 9 |
acinar cell | 2.70e-15 | 5 |
ecto-epithelial cell | 2.53e-13 | 34 |
protein secreting cell | 6.50e-13 | 6 |
stratified squamous epithelial cell | 7.78e-13 | 6 |
keratin accumulating cell | 7.78e-13 | 6 |
stratified epithelial cell | 7.78e-13 | 6 |
keratinizing barrier epithelial cell | 7.78e-13 | 6 |
epithelial fate stem cell | 7.78e-13 | 6 |
stratified epithelial stem cell | 7.78e-13 | 6 |
surface ectodermal cell | 7.78e-13 | 6 |
glandular epithelial cell | 6.36e-09 | 9 |
epithelial cell of alimentary canal | 1.08e-08 | 20 |
ectodermal cell | 1.31e-08 | 72 |
epithelial cell | 6.20e-08 | 253 |
endo-epithelial cell | 3.36e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.42e-36 | 2 |
epidermis gland | 1.42e-36 | 2 |
gland of integumental system | 1.42e-36 | 2 |
sebaceous gland | 1.42e-36 | 2 |
skin sebaceous gland | 1.42e-36 | 2 |
sweat gland | 1.42e-36 | 2 |
sweat gland placode | 1.42e-36 | 2 |
sebaceous gland placode | 1.42e-36 | 2 |
gingival epithelium | 8.95e-25 | 3 |
jaw skeleton | 3.26e-19 | 4 |
splanchnocranium | 3.26e-19 | 4 |
primary subdivision of cranial skeletal system | 1.40e-15 | 5 |
urothelium | 1.40e-15 | 5 |
transitional epithelium | 3.77e-13 | 6 |
protuberance | 3.77e-13 | 6 |
pharyngeal arch | 3.77e-13 | 6 |
embryonic head | 3.77e-13 | 6 |
mouth mucosa | 4.85e-13 | 13 |
skin epidermis | 2.42e-11 | 15 |
outer epithelium | 2.42e-11 | 15 |
enveloping layer of ectoderm | 2.42e-11 | 15 |
surface structure | 3.82e-11 | 99 |
epithelium of mucosa | 6.34e-10 | 8 |
gingiva | 6.34e-10 | 8 |
mucosa | 1.08e-08 | 20 |
head | 3.91e-08 | 56 |
cranial skeletal system | 1.37e-07 | 11 |
anterior region of body | 2.39e-07 | 62 |
craniocervical region | 2.39e-07 | 62 |