FFCP PHASE1:Hg19::chr14:52021408..52021419,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:52021408..52021419,+
|short_description=p8@FRMD6
|description=CAGE_peak_8_at_FRMD6_5end
|association_with_transcript=7bp_to_ENST00000557001_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000557001_5end | |||
|cluster_id=chr14:52021408..52021419,+ | |||
|coexpression_cluster_id=C2298 | |||
|description=CAGE_peak_8_at_FRMD6_5end | |||
|id=chr14:52021408..52021419,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-22!180;CL:0000057!2.06e-16!75;CL:0002620!9.15e-16!23;CL:0000548!4.00e-09!679;CL:0000004!4.00e-09!679;CL:0000255!4.00e-09!679;CL:0000359!6.16e-09!32;CL:0000012!7.33e-09!682;CL:0000192!1.71e-08!42;CL:0000514!1.71e-08!42;CL:0000680!8.29e-08!57;CL:0000056!8.29e-08!57;CL:0000355!8.29e-08!57;CL:0000187!5.40e-07!54;CL:0000144!8.44e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.05e-09;3!CL:0000054;8.09e-07;2!CL:0000137;8.09e-07;2!CL:0000092;8.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.41e-09,3;CL:0000054,8.12e-07,2;CL:0000137,8.12e-07,2;CL:0000092,8.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;1.69e-11;6!DOID:0060100;1.69e-11;6!DOID:200;8.09e-07;2!DOID:4305;8.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,1.11e-11,6;DOID:0060100,1.11e-11,6;DOID:7,4.34e-07,39;DOID:14566,6.05e-07,239;DOID:200,8.12e-07,2;DOID:4305,8.12e-07,2;DOID:0050687,8.47e-07,143;DOID:162,9.74e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.96e-10!40;UBERON:0002199!7.71e-10!45;UBERON:0002416!7.71e-10!45;UBERON:0000914!2.61e-09!83;UBERON:0002329!2.61e-09!83;UBERON:0003077!2.61e-09!83;UBERON:0003059!2.61e-09!83;UBERON:0007282!2.61e-09!83;UBERON:0009618!2.61e-09!83;UBERON:0007285!2.61e-09!83;UBERON:0003102!7.06e-09!95;UBERON:0005256!3.25e-08!143;UBERON:0004290!7.78e-08!70;UBERON:0000486!1.15e-07!82;UBERON:0000475!4.17e-07!365;UBERON:0001134!8.86e-07!61;UBERON:0002036!8.86e-07!61;UBERON:0003082!8.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.05e-09;3!UBERON:0000920;6.05e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.41e-09,3 | |||
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| ||
|short_description=p8@FRMD6 | |||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p8@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FRMD6_5end |
Coexpression cluster: | C2298_pagetoid_liposarcoma_mesothelioma_mucinous_epidermoid_large_bile |
Association with transcript: | 7bp_to_ENST00000557001_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.41e-09 | 3 |
bone matrix secreting cell | 8.12e-07 | 2 |
osteocyte | 8.12e-07 | 2 |
osteoclast | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 1.11e-11 | 6 |
musculoskeletal system cancer | 1.11e-11 | 6 |
disease of anatomical entity | 4.34e-07 | 39 |
disease of cellular proliferation | 6.05e-07 | 239 |
giant cell tumor | 8.12e-07 | 2 |
bone giant cell tumor | 8.12e-07 | 2 |
cell type cancer | 8.47e-07 | 143 |
cancer | 9.74e-07 | 235 |