FFCP PHASE1:Hg19::chr14:52021408..52021419,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:52021408..52021419,+ to FFCP PHASE1:Hg19::chr14:52021408..52021419,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000557001_5end | |||
|cluster_id=chr14:52021408..52021419,+ | |||
|coexpression_cluster_id=C2298 | |||
|description=CAGE_peak_8_at_FRMD6_5end | |||
|id=chr14:52021408..52021419,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.43e-22!180;CL:0000057!2.06e-16!75;CL:0002620!9.15e-16!23;CL:0000548!4.00e-09!679;CL:0000004!4.00e-09!679;CL:0000255!4.00e-09!679;CL:0000359!6.16e-09!32;CL:0000012!7.33e-09!682;CL:0000192!1.71e-08!42;CL:0000514!1.71e-08!42;CL:0000680!8.29e-08!57;CL:0000056!8.29e-08!57;CL:0000355!8.29e-08!57;CL:0000187!5.40e-07!54;CL:0000144!8.44e-07!625 | |||
|ontology_enrichment_celltype_v019=CL:0002541;6.05e-09;3!CL:0000054;8.09e-07;2!CL:0000137;8.09e-07;2!CL:0000092;8.09e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.41e-09,3;CL:0000054,8.12e-07,2;CL:0000137,8.12e-07,2;CL:0000092,8.12e-07,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:201;1.69e-11;6!DOID:0060100;1.69e-11;6!DOID:200;8.09e-07;2!DOID:4305;8.09e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:201,1.11e-11,6;DOID:0060100,1.11e-11,6;DOID:7,4.34e-07,39;DOID:14566,6.05e-07,239;DOID:200,8.12e-07,2;DOID:4305,8.12e-07,2;DOID:0050687,8.47e-07,143;DOID:162,9.74e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0002097!5.96e-10!40;UBERON:0002199!7.71e-10!45;UBERON:0002416!7.71e-10!45;UBERON:0000914!2.61e-09!83;UBERON:0002329!2.61e-09!83;UBERON:0003077!2.61e-09!83;UBERON:0003059!2.61e-09!83;UBERON:0007282!2.61e-09!83;UBERON:0009618!2.61e-09!83;UBERON:0007285!2.61e-09!83;UBERON:0003102!7.06e-09!95;UBERON:0005256!3.25e-08!143;UBERON:0004290!7.78e-08!70;UBERON:0000486!1.15e-07!82;UBERON:0000475!4.17e-07!365;UBERON:0001134!8.86e-07!61;UBERON:0002036!8.86e-07!61;UBERON:0003082!8.86e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;6.05e-09;3!UBERON:0000920;6.05e-09;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.41e-09,3 | |||
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|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0.631719873426831,0,1.72013755551056,0.697801167972428,0,1.05506791291381,0,0,1.34465029290355,0,2.19093027116212,1.46379839637152,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0.665188192387692,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0.496971951695318,0.759783069987479,3.83986624358335,0.286836620748814,0.354668382198357,0.560677600142307,0,1.48000529050296,0,0.134710672069688,0.163461903113459,0,0,0,0,1.1409436430889,0.448346041655403,0.117434498643765,0.971237666208789,0.561803226808994,0,0.245668634623536,0,0,0.741800787835671,0,0,0.336672227908132,0,1.6623846929051,0.877955241761676,1.5324389789951,0.300476117813194,0.567160915800105,1.4351170855109,0.85422955527427,1.05965950579781,1.20036438433761,0.412210116953756,0.257640540045629,0.37223371266318,0.675105328965065,0.389748020644795,0.252433774244115,1.19664868234989,0.161646056818812,0.710019185033229,0.906768884048762,0.847802961552438,0.773043412653187,0.545492241181669,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0,0,0,0,0,0.234817388471643,0.144366447761074,0,0,0,0,0,0,0,0,0.671928512795438,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.308482478109971,0,0,0.672786506072164,0,1.10007428731425,0.258543431515556,0,3.381211010224,1.06375246633948,0,0,1.41849132023278,0,0,0,0,4.56030658011229,0,0,0.301439377059586,0,0,0,0,0,0.479249710983165,0,0,2.17171960001369,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0.788512075169673,0.35142424497814,0,0,0,0.664225598535437,0.553107505625109,0.347534457872331,0,0,0,0,0,0,0,0.30239029332968,0,0.920771839728375,0.561320188866147,0.128139149255701,0,0.64341568457443,1.48418066444991,0.925258162815933,0,0.0821271560138091,0,0.116210378459959,0,0,0,0.34444334449382,1.45672934405374,0.393373244878272,0.451199612907412,1.15523005656622,0,0,0.73886140225013,0,0,0.863663664408557,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0.256450125116389,0,0.976135183992909,0,1.09883357782012,0.660075999364704,0,0,0,0,0,0,2.06754858726796,0.107420244868274,0,0.340906509664404,0,0,0,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,2.12922412126809,0,0.18532421910392,0.572499546967965,0.372158369359667,2.53103539774981,0.190630193923825,0,0,0,0.78494864019923,0.539617372749944,0,0.589062011728432,0.808729926293264,0,0.842516912477962,0,0.243713489631284,0,0.409499734223957,0,0,0,1.32687795048244,2.19225442626881,0,0,1.82619339266434,0.92947049429925,0,0.430234056612155,0.392996164052485,1.78335525740625,0.709522128141196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12549761487054,0,0,0,0,0,2.89402633059555,0,0,0,0,0,0.818149460017238,0,1.55519793830904,5.30223271769228,0,0,0,0,5.55684950723184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36730467016401,0,0,0,6.06102203490647,5.67905079091546,1.5991043280559,0,0,0,0,0,0,0,0,0.210998064528027,0.652931232636591,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0.992975867626496,0.627865836814451,1.19472429772959,0,0.138674673013139,0,0,16.4541900436961,0,0,0,0,0,0,0,0,5.61871891051679,7.7498698564166,0,0,4.16825865307975,0,0.19980960958213,0,0,0,0.14405479798815,2.11229310461235,0,1.49494626680975,0.941425616810999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.44426868205559,0,0,0,1.08599920350743,0.864221491201268,0.979762080328227,2.39460383124975,0,15.6756980042588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0,2.11739237728355,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0.457680136793847,0,0,0.147855149989634,0.477890301491107,0,0,0.414706207840855,0.265841714557995,1.04349012362347,0,0,0.406870733204662,0.545545977607678,0.107410557042488,0,0.796191777397232,7.20049976393677,0,0,0,0.192619830407303,0,0,2.493765180635,2.54674721756217,1.95789363605174,19.3415948368006,0,0,10.9547270486446,1.54331230616732,0,0,0.345430341731199,2.73473960559644,0,0,0,0,0.982829546539238,2.45772908753719,16.4823456219729,0,0,0,7.9452233499357,1.65695355226657,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0.918736432059601,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,4.50550097986319,3.81382095467167,2.7614397042404,0,0,18.7585713894274,0,0,1.96526301012116,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443511850813194,0,0,0,0,0,2.11339663594931,0,0,0,0,2.59113109462346,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35941691750254,0,0,0,0,2.11736923029415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0.267964130156178,0,0,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| ||
|short_description=p8@FRMD6 | |||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p8@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FRMD6_5end |
Coexpression cluster: | C2298_pagetoid_liposarcoma_mesothelioma_mucinous_epidermoid_large_bile |
Association with transcript: | 7bp_to_ENST00000557001_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.41e-09 | 3 |
bone matrix secreting cell | 8.12e-07 | 2 |
osteocyte | 8.12e-07 | 2 |
osteoclast | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.41e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue cancer | 1.11e-11 | 6 |
musculoskeletal system cancer | 1.11e-11 | 6 |
disease of anatomical entity | 4.34e-07 | 39 |
disease of cellular proliferation | 6.05e-07 | 239 |
giant cell tumor | 8.12e-07 | 2 |
bone giant cell tumor | 8.12e-07 | 2 |
cell type cancer | 8.47e-07 | 143 |
cancer | 9.74e-07 | 235 |