FFCP PHASE1:Hg19::chr7:95225580..95225618,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:95225580..95225618,-
|short_description=p4@PDK4
|description=CAGE_peak_4_at_PDK4_5end
|association_with_transcript=153bp_to_ENST00000473301_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5166 | |EntrezGene=5166 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8812 | |HGNC=8812 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=153bp_to_ENST00000473301_5end | |||
|cluster_id=chr7:95225580..95225618,- | |||
|coexpression_cluster_id=C538 | |||
|description=CAGE_peak_4_at_PDK4_5end | |||
|id=chr7:95225580..95225618,- | |||
|ontology_enrichment_celltype=CL:0000136!4.26e-09!15 | |||
|ontology_enrichment_celltype_v019=CL:0000136;9.74e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,5.13e-09,15 | |||
|ontology_enrichment_development_v019=UBERON:0006603;1.01e-07;65!UBERON:0007297;1.82e-07;2!UBERON:0010122;7.41e-07;2!UBERON:0006965;7.41e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;4.61e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,4.63e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.09e-70!115;UBERON:0001049!7.67e-23!57;UBERON:0005068!7.67e-23!57;UBERON:0006241!7.67e-23!57;UBERON:0007135!7.67e-23!57;UBERON:0002616!1.67e-17!59;UBERON:0003075!7.21e-17!86;UBERON:0007284!7.21e-17!86;UBERON:0002346!1.61e-15!90;UBERON:0001017!1.70e-15!82;UBERON:0005743!5.24e-15!86;UBERON:0000955!7.85e-15!69;UBERON:0006238!7.85e-15!69;UBERON:0003080!1.28e-14!42;UBERON:0000073!4.75e-14!94;UBERON:0001016!4.75e-14!94;UBERON:0002780!1.26e-13!41;UBERON:0001890!1.26e-13!41;UBERON:0006240!1.26e-13!41;UBERON:0002020!2.79e-12!34;UBERON:0003528!2.79e-12!34;UBERON:0001893!5.45e-12!34;UBERON:0002791!1.98e-11!33;UBERON:0001869!1.76e-10!32;UBERON:0002420!2.28e-10!9;UBERON:0007245!2.28e-10!9;UBERON:0010009!2.28e-10!9;UBERON:0010011!2.28e-10!9;UBERON:0000454!2.28e-10!9;UBERON:0002308!5.45e-10!9;UBERON:0000125!5.45e-10!9;UBERON:0003076!7.76e-10!15;UBERON:0003057!7.76e-10!15;UBERON:0002298!1.08e-09!8;UBERON:0000153!2.21e-09!129;UBERON:0007811!2.21e-09!129;UBERON:0003056!2.15e-08!61;UBERON:0009663!2.84e-08!7;UBERON:0000033!5.12e-08!123;UBERON:0004732!5.31e-08!13;UBERON:0004121!1.26e-07!169;UBERON:0000062!1.85e-07!511;UBERON:0000924!3.75e-07!173;UBERON:0006601!3.75e-07!173;UBERON:0002619!4.67e-07!22;UBERON:0004733!5.32e-07!12;UBERON:0002028!5.32e-07!12;UBERON:0007277!5.32e-07!12;UBERON:0001950!8.41e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.35e-13;114!UBERON:0006947;1.22e-10;3!UBERON:0004054;1.22e-10;3!UBERON:0005904;4.53e-08;4!UBERON:0002133;1.09e-07;2!UBERON:0001873;7.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.92e-47,114;UBERON:0006947,1.63e-10,3;UBERON:0004054,1.63e-10,3;UBERON:0005904,5.64e-08,4;UBERON:0002133,9.91e-08,2;UBERON:0001049,3.08e-07,56;UBERON:0005068,3.08e-07,56;UBERON:0006241,3.08e-07,56;UBERON:0007135,3.08e-07,56;UBERON:0003103,4.94e-07,68;UBERON:0001873,8.65e-07,2;UBERON:0010122,8.65e-07,2;UBERON:0003076,8.95e-07,15;UBERON:0003057,8.95e-07,15 | |||
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| ||
|short_description=p4@PDK4 | |||
}} | }} |
Latest revision as of 05:05, 20 September 2015
Short description: | p4@PDK4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PDK4_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 153bp_to_ENST00000473301_5end |
EntrezGene: | PDK4 |
HGNC: | 8812 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 5.13e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.92e-47 | 114 |
male genital duct | 1.63e-10 | 3 |
internal male genitalia | 1.63e-10 | 3 |
duct of male reproductive system | 5.64e-08 | 4 |
atrioventricular valve | 9.91e-08 | 2 |
neural tube | 3.08e-07 | 56 |
neural rod | 3.08e-07 | 56 |
future spinal cord | 3.08e-07 | 56 |
neural keel | 3.08e-07 | 56 |
compound organ | 4.94e-07 | 68 |
caudate nucleus | 8.65e-07 | 2 |
future caudate nucleus | 8.65e-07 | 2 |
posterior neural tube | 8.95e-07 | 15 |
chordal neural plate | 8.95e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
heart disease | 4.63e-08 | 2 |