FFCP PHASE1:Hg19::chr14:52118619..52118673,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=122786 | |EntrezGene=122786 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19839 | |HGNC=19839 | ||
|TSSclassifier=strong | |||
|UniProt=Q96NE9 | |UniProt=Q96NE9 | ||
|association_with_transcript=0bp_to_ENST00000344768_5end | |association_with_transcript=0bp_to_ENST00000344768_5end | ||
|cluster_id=chr14:52118619..52118673,+ | |||
|description=CAGE_peak_1_at_FRMD6_5end | |description=CAGE_peak_1_at_FRMD6_5end | ||
|id=chr14:52118619..52118673,+ | |id=chr14:52118619..52118673,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.59e-38!180;CL:0000057!4.32e-21!75;CL:0000222!5.24e-21!119;CL:0000680!1.85e-17!57;CL:0000056!1.85e-17!57;CL:0000355!1.85e-17!57;CL:0000187!2.51e-16!54;CL:0000183!3.78e-16!59;CL:0000220!4.03e-16!246;CL:0002321!1.06e-15!248;CL:0000192!2.44e-14!42;CL:0000514!2.44e-14!42;CL:0000393!1.90e-13!60;CL:0000211!1.90e-13!60;CL:0000359!5.45e-13!32;CL:0002620!3.09e-12!23 | |ontology_enrichment_celltype=CL:0000055!1.59e-38!180;CL:0000057!4.32e-21!75;CL:0000222!5.24e-21!119;CL:0000680!1.85e-17!57;CL:0000056!1.85e-17!57;CL:0000355!1.85e-17!57;CL:0000187!2.51e-16!54;CL:0000183!3.78e-16!59;CL:0000220!4.03e-16!246;CL:0002321!1.06e-15!248;CL:0000192!2.44e-14!42;CL:0000514!2.44e-14!42;CL:0000393!1.90e-13!60;CL:0000211!1.90e-13!60;CL:0000359!5.45e-13!32;CL:0002620!3.09e-12!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;2.38e-12;23!CL:0000359;2.92e-12;32!CL:0000192;1.50e-10;43!CL:0000187;1.59e-09;55!CL:0000057;1.17e-08;73!CL:0000393;1.77e-07;61!CL:0000211;1.77e-07;61!CL:0002320;2.20e-07;188!CL:0000134;3.30e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,7.53e-22,76;CL:0000222,3.54e-21,121;CL:0000680,1.38e-17,58;CL:0000056,1.38e-17,58;CL:0000355,1.38e-17,58;CL:0000187,1.91e-16,55;CL:0002321,1.18e-15,250;CL:0000192,2.01e-14,43;CL:0000514,2.01e-14,43;CL:0000393,1.41e-13,61;CL:0000211,1.41e-13,61;CL:0000359,4.44e-13,32;CL:0002620,2.56e-12,23 | |||
|ontology_enrichment_development_v019=CL:0000514;1.50e-10;43!CL:0000355;1.88e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.51e-20!83;UBERON:0002329!2.51e-20!83;UBERON:0003077!2.51e-20!83;UBERON:0003059!2.51e-20!83;UBERON:0007282!2.51e-20!83;UBERON:0009618!2.51e-20!83;UBERON:0007285!2.51e-20!83;UBERON:0002049!5.03e-19!79;UBERON:0007798!5.03e-19!79;UBERON:0004290!7.61e-19!70;UBERON:0005256!5.40e-18!143;UBERON:0000475!1.86e-17!365;UBERON:0000486!5.76e-17!82;UBERON:0004872!1.31e-16!84;UBERON:0000055!1.73e-16!69;UBERON:0001134!2.66e-16!61;UBERON:0002036!2.66e-16!61;UBERON:0003082!2.66e-16!61;UBERON:0002385!5.33e-16!63;UBERON:0001015!5.33e-16!63;UBERON:0000383!5.33e-16!63;UBERON:0001981!1.21e-15!60;UBERON:0007500!1.21e-15!60;UBERON:0004537!1.21e-15!60;UBERON:0006965!1.21e-15!60;UBERON:0000490!1.37e-15!138;UBERON:0003102!1.47e-14!95;UBERON:0002100!2.60e-14!216;UBERON:0003914!5.68e-14!118;UBERON:0001637!8.84e-14!42;UBERON:0003509!8.84e-14!42;UBERON:0004572!8.84e-14!42;UBERON:0000468!2.33e-13!659;UBERON:0002199!1.24e-12!45;UBERON:0002416!1.24e-12!45;UBERON:0004573!1.86e-12!33;UBERON:0004571!1.86e-12!33;UBERON:0002097!3.55e-12!40;UBERON:0000119!7.08e-12!312;UBERON:0004535!8.35e-12!110;UBERON:0000483!2.28e-11!309;UBERON:0001009!3.71e-11!113;UBERON:0000467!1.15e-10!625;UBERON:0000480!1.89e-10!626;UBERON:0003104!7.62e-10!238;UBERON:0009142!7.62e-10!238;UBERON:0000477!1.47e-09!286;UBERON:0000481!1.56e-09!347;UBERON:0000947!1.60e-08!21;UBERON:0010191!1.60e-08!21;UBERON:0004923!4.43e-08!57;UBERON:0004111!7.76e-08!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.09e-11;33!UBERON:0004571;2.09e-11;33!UBERON:0001637;3.96e-10;42!UBERON:0003509;3.96e-10;42!UBERON:0004572;3.96e-10;42!UBERON:0002097;1.29e-09;41!UBERON:0007500;2.36e-09;56!UBERON:0001981;2.36e-09;56!UBERON:0004537;2.36e-09;56!UBERON:0002199;9.91e-09;46!UBERON:0002416;9.91e-09;46!UBERON:0000947;1.43e-08;21!UBERON:0010191;1.43e-08;21!UBERON:0000055;2.21e-08;65!UBERON:0002049;2.33e-08;75!UBERON:0007798;2.33e-08;75!UBERON:0002384;2.11e-07;198!UBERON:0002385;2.37e-07;31!UBERON:0001015;2.37e-07;31!UBERON:0000383;2.37e-07;31!UBERON:0003102;3.86e-07;50 | |||
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| ||
|short_description=p1@FRMD6 | |short_description=p1@FRMD6 | ||
}} | }} |
Latest revision as of 05:15, 20 September 2015
Short description: | p1@FRMD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FRMD6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000344768_5end |
EntrezGene: | FRMD6 |
HGNC: | 19839 |
UniProt: | Q96NE9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 7.53e-22 | 76 |
mesodermal cell | 3.54e-21 | 121 |
muscle precursor cell | 1.38e-17 | 58 |
myoblast | 1.38e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.38e-17 | 58 |
muscle cell | 1.91e-16 | 55 |
embryonic cell | 1.18e-15 | 250 |
smooth muscle cell | 2.01e-14 | 43 |
smooth muscle myoblast | 2.01e-14 | 43 |
electrically responsive cell | 1.41e-13 | 61 |
electrically active cell | 1.41e-13 | 61 |
vascular associated smooth muscle cell | 4.44e-13 | 32 |
skin fibroblast | 2.56e-12 | 23 |