FFCP PHASE1:Hg19::chr18:64271403..64271414,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:64271403..64271414,- to FFCP PHASE1:Hg19::chr18:64271403..64271414,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28513 | |EntrezGene=28513 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1758 | |HGNC=1758 | ||
|TSSclassifier=strong | |||
|UniProt=Q96KY9 | |UniProt=Q96KY9 | ||
|association_with_transcript=0bp_to_ENST00000454642_5end | |||
|cluster_id=chr18:64271403..64271414,- | |||
|coexpression_cluster_id=C1803 | |||
|description=CAGE_peak_4_at_CDH19_5end | |||
|id=chr18:64271403..64271414,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002553;1.53e-07;1!CL:0002566;4.20e-07;1!CL:0000149;5.19e-07;4!CL:0000147;6.12e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.63e-07,1;CL:0000149,4.76e-07,4;CL:0000147,6.13e-07,14;CL:0002566,6.97e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;8.32e-15;4!UBERON:0007284;8.32e-15;4!UBERON:0006241;1.19e-08;3!UBERON:0003057;1.19e-08;3!UBERON:0004140;1.27e-07;1!UBERON:0010226;1.53e-07;1!UBERON:0010227;1.96e-07;1!UBERON:0009143;4.20e-07;1!UBERON:0006242;4.20e-07;1!UBERON:0005425;4.20e-07;1!UBERON:0004874;4.20e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.44e-63!115;UBERON:0001049!9.78e-24!57;UBERON:0005068!9.78e-24!57;UBERON:0006241!9.78e-24!57;UBERON:0007135!9.78e-24!57;UBERON:0003075!1.22e-23!86;UBERON:0007284!1.22e-23!86;UBERON:0002346!2.04e-23!90;UBERON:0005743!9.66e-23!86;UBERON:0001017!3.20e-21!82;UBERON:0000073!5.06e-21!94;UBERON:0001016!5.06e-21!94;UBERON:0000955!1.37e-17!69;UBERON:0006238!1.37e-17!69;UBERON:0002616!1.51e-17!59;UBERON:0000924!5.28e-16!173;UBERON:0006601!5.28e-16!173;UBERON:0004121!7.40e-16!169;UBERON:0002780!1.10e-14!41;UBERON:0001890!1.10e-14!41;UBERON:0006240!1.10e-14!41;UBERON:0000153!3.21e-14!129;UBERON:0007811!3.21e-14!129;UBERON:0003080!3.29e-14!42;UBERON:0004111!9.72e-14!241;UBERON:0000033!1.35e-13!123;UBERON:0002020!4.37e-13!34;UBERON:0003528!4.37e-13!34;UBERON:0000025!8.83e-13!194;UBERON:0000477!1.03e-12!286;UBERON:0002298!5.65e-12!8;UBERON:0002791!9.07e-12!33;UBERON:0003076!1.58e-11!15;UBERON:0003057!1.58e-11!15;UBERON:0001893!2.62e-11!34;UBERON:0000062!1.95e-10!511;UBERON:0003056!2.19e-10!61;UBERON:0007100!2.83e-09!27;UBERON:0001869!3.93e-09!32;UBERON:0000481!3.93e-09!347;UBERON:0002619!4.90e-09!22;UBERON:0004732!1.17e-08!13;UBERON:0001950!2.10e-08!20;UBERON:0000483!2.26e-08!309;UBERON:0000119!3.72e-08!312;UBERON:0003978!5.90e-08!3;UBERON:0009751!5.90e-08!3;UBERON:0000946!5.90e-08!3;UBERON:0002523!5.90e-08!3;UBERON:0005983!5.90e-08!3;UBERON:0002165!5.90e-08!3;UBERON:0002062!5.90e-08!3;UBERON:0007280!5.90e-08!3;UBERON:0004151!7.51e-08!3;UBERON:0000956!1.09e-07!25;UBERON:0000203!1.09e-07!25;UBERON:0002308!1.22e-07!9;UBERON:0000125!1.22e-07!9;UBERON:0000948!2.18e-07!24;UBERON:0005498!2.18e-07!24;UBERON:0004140!2.18e-07!24;UBERON:0009881!2.18e-07!24;UBERON:0004141!2.18e-07!24;UBERON:0003084!2.18e-07!24;UBERON:0007005!2.18e-07!24;UBERON:0004139!2.18e-07!24;UBERON:0004291!2.18e-07!24;UBERON:0000475!2.57e-07!365;UBERON:0004733!3.59e-07!12;UBERON:0002028!3.59e-07!12;UBERON:0007277!3.59e-07!12;UBERON:0006331!3.82e-07!3;UBERON:0002240!5.30e-07!3;UBERON:0001896!8.76e-07!3;UBERON:0005290!8.76e-07!3;UBERON:0010096!8.76e-07!3;UBERON:0002771!9.11e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003978;1.46e-19;3!UBERON:0000946;1.46e-19;3!UBERON:0004151;2.87e-19;3!UBERON:0007100;9.84e-19;25!UBERON:0000948;5.49e-17;22!UBERON:0002784;7.88e-14;4!UBERON:0002133;9.49e-14;2!UBERON:0002081;1.87e-13;2!UBERON:0001905;1.54e-12;2!UBERON:0002757;1.54e-12;2!UBERON:0010134;1.54e-12;2!UBERON:0005408;1.54e-12;2!UBERON:0001899;1.54e-12;2!UBERON:0002240;1.19e-08;3!UBERON:0005174;1.19e-08;3!UBERON:0001137;1.19e-08;3!UBERON:0001894;4.12e-08;7!UBERON:0002135;9.89e-08;1!UBERON:0002134;1.05e-07;1!UBERON:0005208;1.05e-07;1!UBERON:0004145;1.05e-07;1!UBERON:0005946;1.05e-07;1!UBERON:0005965;1.05e-07;1!UBERON:0002078;1.05e-07;1!UBERON:0002084;1.53e-07;1!UBERON:0002146;1.53e-07;1!UBERON:0002082;1.53e-07;1!UBERON:0005623;1.53e-07;1!UBERON:0002079;1.96e-07;1!UBERON:0002038;1.96e-07;1!UBERON:0009661;1.96e-07;1!UBERON:0002950;1.96e-07;1!UBERON:0001891;1.96e-07;1!UBERON:0000989;4.20e-07;1!UBERON:0000996;4.20e-07;1!UBERON:0000941;4.20e-07;1!UBERON:0001785;4.20e-07;1!UBERON:0002464;4.20e-07;1!UBERON:0004904;4.20e-07;1!UBERON:0008811;4.20e-07;1!UBERON:0001021;4.20e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003978,1.47e-19,3;UBERON:0009751,1.47e-19,3;UBERON:0000946,1.47e-19,3;UBERON:0002523,1.47e-19,3;UBERON:0005983,1.47e-19,3;UBERON:0002165,1.47e-19,3;UBERON:0002062,1.47e-19,3;UBERON:0007280,1.47e-19,3;UBERON:0004151,2.88e-19,3;UBERON:0007023,2.11e-18,114;UBERON:0007100,3.14e-17,27;UBERON:0000948,1.82e-15,24;UBERON:0005498,1.82e-15,24;UBERON:0004140,1.82e-15,24;UBERON:0009881,1.82e-15,24;UBERON:0004141,1.82e-15,24;UBERON:0003084,1.82e-15,24;UBERON:0007005,1.82e-15,24;UBERON:0004139,1.82e-15,24;UBERON:0004291,1.82e-15,24;UBERON:0002133,9.52e-14,2;UBERON:0010314,9.64e-14,132;UBERON:0002784,1.59e-13,4;UBERON:0002081,2.00e-13,2;UBERON:0010227,2.00e-13,2;UBERON:0003075,6.83e-13,82;UBERON:0007284,6.83e-13,82;UBERON:0001905,3.50e-12,2;UBERON:0002757,3.50e-12,2;UBERON:0010134,3.50e-12,2;UBERON:0005408,3.50e-12,2;UBERON:0001899,3.50e-12,2;UBERON:0002346,3.70e-12,86;UBERON:0010371,4.92e-11,104;UBERON:0000025,3.32e-09,192;UBERON:0003103,7.40e-09,68;UBERON:0002240,1.10e-08,3;UBERON:0005174,1.10e-08,3;UBERON:0001137,1.10e-08,3;UBERON:0004797,1.18e-08,7;UBERON:0001049,2.02e-08,56;UBERON:0005068,2.02e-08,56;UBERON:0006241,2.02e-08,56;UBERON:0007135,2.02e-08,56;UBERON:0001894,6.10e-08,7;UBERON:0006222,6.10e-08,7;UBERON:0002135,9.91e-08,1;UBERON:0002134,1.06e-07,1;UBERON:0005208,1.06e-07,1;UBERON:0005946,1.06e-07,1;UBERON:0005965,1.06e-07,1;UBERON:0002078,1.06e-07,1;UBERON:0002084,1.44e-07,1;UBERON:0002082,1.44e-07,1;UBERON:0010226,1.44e-07,1;UBERON:0002146,1.54e-07,1;UBERON:0005623,1.54e-07,1;UBERON:0002038,1.97e-07,1;UBERON:0009661,1.97e-07,1;UBERON:0002950,1.97e-07,1;UBERON:0001891,1.97e-07,1;UBERON:0009616,1.97e-07,1;UBERON:0010286,1.97e-07,1;UBERON:0002079,2.09e-07,1;UBERON:0004111,2.27e-07,240;UBERON:0000989,2.37e-07,1;UBERON:0008811,2.37e-07,1;UBERON:0006258,2.37e-07,1;UBERON:0005876,2.37e-07,1;UBERON:0004874,2.37e-07,1;UBERON:0000941,3.41e-07,1;UBERON:0001785,3.41e-07,1;UBERON:0002464,3.41e-07,1;UBERON:0004904,3.41e-07,1;UBERON:0001021,3.41e-07,1;UBERON:0003902,3.41e-07,1;UBERON:0005425,3.41e-07,1;UBERON:0000996,4.08e-07,1;UBERON:0001781,6.59e-07,4;UBERON:0001016,8.40e-07,89 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.02512002659322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,0.381988425558278,0,0,1.64523988325318,2.40274446275134,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27764876265012,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,1.94144542218394,0,0.0979923974143777,0,0,0,0,0,0,1.06687918137261,0,0.677942222341597,0,0,0.443175571691151,0,0,1.06726497369676,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,22.9011569043248,6.41649187232714,15.7932065406899,0.599037001496973,0,7.58782955302367,7.86046628094697,0,0,0,0,0,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,2.1440859791201,6.62091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,1.71902382265497,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.751145584238999,1.14681839138014,0.887432412294818,0.372578417648301,1.66018361923477,0.124980407962107,0.758245587708239,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,6.40456598628376,0,0,0.256916900385838,0,0.957803154342908,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0.620060389503552,0.19024743058172,0,0.548257766857182,1.98484471355718,0,0,1.07140367175657,1.00885116665647,0,0,0,0,0.342976018874837,0.475788130837822,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,1.48523200163543,0.4226557275834,0,0.657887425858975,0.0644578879735772,0,0,0,0,0.730336388246517,0.917458566809082,2.15009374727177,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,2.0686599172379,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.653150243690884,0,0.134704106029175,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0.402547587182052,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,0.670700859703636,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.02512002659322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0159663086747,0.381988425558278,0,0,1.64523988325318,2.40274446275134,0.571652865261156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27764876265012,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.73254089635947,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,0,0,0,0,0,0,0.887790650732402,0,0,0,0.649376687132959,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0.438770794307945,0,0,0.538651809526579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,0.337005664903385,0,0.468528891450678,0,0,0,0.789168805698781,0,0,0.31593289814244,0,0,0,0,0,0,0,1.94144542218394,0,0.0979923974143777,0,0,0,0,0,0,1.06687918137261,0,0.677942222341597,0,0,0.443175571691151,0,0,1.06726497369676,0,0,0.114536596165916,0,0,0,0,0,0,0,0,0,1.36905378891993,0,0,0,22.9011569043248,6.41649187232714,15.7932065406899,0.599037001496973,0,7.58782955302367,7.86046628094697,0,0,0,0,0,0.590564889088493,0,0,0.544813624446302,0,0,0,0,0,0.0607495566580247,0,0,0,0,0.35857467866569,0,2.1440859791201,6.62091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0.387848869084652,1.71902382265497,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0,0,0,0,0.366078794705889,0.751145584238999,1.14681839138014,0.887432412294818,0.372578417648301,1.66018361923477,0.124980407962107,0.758245587708239,1.42732666772484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,6.40456598628376,0,0,0.256916900385838,0,0.957803154342908,0,0,0.0691572524642179,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.376051641746286,0,0,0,0,0,0,0,0.620060389503552,0.19024743058172,0,0.548257766857182,1.98484471355718,0,0,1.07140367175657,1.00885116665647,0,0,0,0,0.342976018874837,0.475788130837822,0.0657727735628491,0,0,0.470958557103084,0,0,0,0,0,0.500335809236594,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.307988420568741,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17785080268967,1.48523200163543,0.4226557275834,0,0.657887425858975,0.0644578879735772,0,0,0,0,0.730336388246517,0.917458566809082,2.15009374727177,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.454672189309436,0,0,2.0686599172379,0.426467963801962,0,0,0.0620747142958579,0,0.0636471582781649,0.202117188958219,0.653150243690884,0,0.134704106029175,0.932388670104793,0.332660356546013,0,0,0,0,0,0,0,1.33151354837103,0.402547587182052,0 | ||
|short_description=p4@CDH19 | |||
}} | }} |
Latest revision as of 05:40, 20 September 2015
Short description: | p4@CDH19 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CDH19_5end |
Coexpression cluster: | C1803_heart_melanoma_nonsmall_left_Fibroblast_substantia_Melanocyte |
Association with transcript: | 0bp_to_ENST00000454642_5end |
EntrezGene: | CDH19 |
HGNC: | 1758 |
UniProt: | Q96KY9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.63e-07 | 1 |
visual pigment cell | 4.76e-07 | 4 |
pigment cell | 6.13e-07 | 14 |
dark melanocyte | 6.97e-07 | 1 |