FFCP PHASE1:Hg19::chr2:216974046..216974091,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:216974046..216974091,+ to FFCP PHASE1:Hg19::chr2:216974046..216974091,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7520 | |EntrezGene=7520 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12833 | |HGNC=12833 | ||
|TSSclassifier=strong | |||
|UniProt=C9JZ81 | |UniProt=C9JZ81 | ||
|association_with_transcript=0bp_to_ENST00000417391,ENST00000429133,ENST00000476360_5end | |||
|cluster_id=chr2:216974046..216974091,+ | |||
|description=CAGE_peak_2_at_XRCC5_5end | |||
|id=chr2:216974046..216974091,+ | |||
|ontology_enrichment_celltype=CL:0002321!1.20e-08!248;CL:0000055!2.32e-08!180;CL:0000071!3.94e-08!18;CL:0002546!3.94e-08!18;CL:0000220!4.36e-08!246;CL:0002139!1.03e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000071;4.11e-08;18!CL:0002139;1.06e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.70e-08,250;CL:0000071,3.94e-08,18;CL:0002546,3.94e-08,18;CL:0002139,1.03e-07,24 | |||
|ontology_enrichment_development_v019=CL:0002546;4.11e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!3.94e-08!18;UBERON:0004638!3.94e-08!18;UBERON:0004852!3.94e-08!18;UBERON:0000487!8.43e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.11e-08;18!UBERON:0001986;4.11e-08;18!UBERON:0004852;4.11e-08;18!UBERON:0000490;4.56e-07;33!UBERON:0000487;8.64e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,3.94e-08,18;UBERON:0001986,3.94e-08,18;UBERON:0004852,3.94e-08,18;UBERON:0000487,8.43e-07,22 | |||
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| ||
|short_description=p2@XRCC5 | |||
}} | }} |
Latest revision as of 05:51, 20 September 2015
Short description: | p2@XRCC5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_XRCC5_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000417391, ENST00000429133, ENST00000476360_5end |
EntrezGene: | XRCC5 |
HGNC: | 12833 |
UniProt: | C9JZ81 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.70e-08 | 250 |
blood vessel endothelial cell | 3.94e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.94e-08 | 18 |
endothelial cell of vascular tree | 1.03e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 3.94e-08 | 18 |
endothelium | 3.94e-08 | 18 |
cardiovascular system endothelium | 3.94e-08 | 18 |
simple squamous epithelium | 8.43e-07 | 22 |