FFCP PHASE1:Hg19::chr12:69753583..69753598,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:69753583..69753598,+
|short_description=p2@YEATS4
|description=CAGE_peak_2_at_YEATS4_5end
|association_with_transcript=24bp_to_ENST00000552955_5end
|Entr...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8089 | |EntrezGene=8089 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24859 | |HGNC=24859 | ||
|TSSclassifier=strong | |||
|UniProt=F8W1B9 | |UniProt=F8W1B9 | ||
|association_with_transcript=24bp_to_ENST00000552955_5end | |||
|cluster_id=chr12:69753583..69753598,+ | |||
|description=CAGE_peak_2_at_YEATS4_5end | |||
|id=chr12:69753583..69753598,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000313;1.65e-16;1!CL:0000159;6.42e-09;2!CL:0002253;6.42e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,8.86e-17,1;CL:0000159,4.70e-09,2;CL:0002253,5.94e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.22e-14;10!UBERON:0005564;2.22e-14;10 | |||
|ontology_enrichment_disease=DOID:14566!3.52e-18!239;DOID:162!1.11e-17!235;DOID:0050686!1.13e-12!137;DOID:0050687!4.18e-10!143;DOID:305!5.63e-09!106;DOID:2531!3.05e-08!51;DOID:0060083!3.05e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.65e-16;1!DOID:10165;1.65e-16;1!DOID:2152;1.65e-16;1!DOID:1798;1.65e-16;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,8.86e-17,1;DOID:1799,2.25e-16,1;DOID:10165,2.25e-16,1;DOID:1798,2.25e-16,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;1.65e-16;1!UBERON:0004909;6.42e-09;2!UBERON:0000473;1.26e-08;8!UBERON:0000991;3.80e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,8.86e-17,1;UBERON:0004909,4.70e-09,2;UBERON:0000473,1.17e-08,8;UBERON:0000991,3.35e-07,21;UBERON:0009196,3.35e-07,21;UBERON:0009117,3.35e-07,21;UBERON:0005564,3.35e-07,21;UBERON:0004176,6.75e-07,22 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.441175890929576,0,0,0,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.268675568108545,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.577076851905779,0.355709216742071,0,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0.626719583092093,0,0,0.1605880751037,0,0.425846237690326,0.687010689511529,0,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0.63337622438398,0,0,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.325942115766024,0,0,0.533034776018635,1.02193298195737,0,0.332423363800313,0.225595660617181,0.392125068635479,0.335643173951685,0,0.317873157960757,0.210998064528027,0.489698424477443,1.13082457147153,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0,0,0.547364367646998,0.586993856796269,0.485560759068186,0,0,0,0.063186579628488,3.60776206594782,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.288180834308212,0.114536596165916,0.686379991447858,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0.393915911536118,0.164831716762333,0.337017719270924,0,0.169346664131569,0,0.272406812223151,1.12527203925513,0.275078873194468,0.83088067605837,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,0,0.864221491201268,0,3.59190574687462,0.164185041498678,0.511164065356265,0.113312091520126,0.293104467356165,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,1.09613338542806,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.491545817507439,0,0.39997479170986,0,0,0,0.184105950251841,0.279759015438889,0,0,0.107824811396682,0.471797825567689,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.353909170043221,0.183428598521679,0.231051332300676,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,1.04762677792569,0,0.295712172434091,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0.314231179832004,0.560544326627578,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,6.7804726198006,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0.846774100381858,0,0,0,1.78968690876468,0.196300467230486,0.365753774946808,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.11294608203896,0.219881033490858,0.754814217833368,0.154348316215889,0.218559560503957,0.940634592723046,0,0.235676547101626,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0.218531143927391,0.253397002022874,0.305966489225945,0,0.0918948995348449,2.005660314339,1.51557396436479,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | |phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0.572471974262113,0.273748850145768,0,0.0764134057479513,0.328402357799783,0.0787107813136792,0,0.383829398097213,0.154816123316076,0,0.30120591877825,0,0.309868802321207,0.142169232487422,0,0,0,0,0,0,0,0,0,0.242584061187816,0.232429036905685,0,0,0.28769239232215,0.256160706529101,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0.251248665256743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0.205601498999509,0.167186495390678,0.32592226663359,0,0,0.334231370655521,0.589211814949674,0.221533894583621,0,0.384273959177026,0.260118695119756,0.164437904603676,0.552700035571697,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.802320587350522,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0,0.735326160691737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0.352303495931295,0.161872944368132,0.421352420106746,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0.243947412259191,0.132529768321485,0.232387885739037,0.310983165046111,0.252320850875628,0,0,0,0,0.464367928031979,0,0,0.168584690078102,0,0.441175890929576,0,0,0,0.392442930250692,0.38474715694639,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0,0,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567100388969546,0.268675568108545,0,0,0.492663237895943,0,0.207328115540772,0.144119953416961,0.50496973370552,0,0,0,1.71072446022705,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0.224170287987055,0.394061520403854,0.646882724578552,0.385029108839245,0,0,0.773288812777695,0.502548796003046,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0.184369168541703,0.173767228936166,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0.114814448164607,0,0,0,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0,0.183138929636687,0.247528499761764,0,0,0,0.096670718292122,0.154048617114644,0,0.413509717453592,0.107420244868274,0.145016693914229,0.255679882248303,0,0,0,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.371606350251437,0.577076851905779,0.355709216742071,0,0.199579371432817,0,0,0,0.280797178113459,0.228234679033192,0.626719583092093,0,0,0.1605880751037,0,0.425846237690326,0.687010689511529,0,0.223676107892416,0.166849141711909,0.390776190804081,0.278406173895242,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.329607748453519,0.63337622438398,0,0,0,0,0.123084805461069,0,0.179736702294654,0.179021174675609,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0.0874599999961957,0,0,0.254253650292766,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0.10893846351899,0.41827123283581,0.0769502585037971,0,0.23056390438806,0.179515288819544,0.325942115766024,0,0,0.533034776018635,1.02193298195737,0,0.332423363800313,0.225595660617181,0.392125068635479,0.335643173951685,0,0.317873157960757,0.210998064528027,0.489698424477443,1.13082457147153,0.216388639742091,0,0.0884575645033392,0,0.296521128680622,0,0,0.134802265961354,0,0,0.547364367646998,0.586993856796269,0.485560759068186,0,0,0,0.063186579628488,3.60776206594782,0.103688191397247,0,0,0,0,0,0.138674673013139,0,0.195984794828755,0.261177619741208,0,0,0.19351266257817,0.219267951258557,0.164230914106418,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.288180834308212,0.114536596165916,0.686379991447858,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0.393915911536118,0.164831716762333,0.337017719270924,0,0.169346664131569,0,0.272406812223151,1.12527203925513,0.275078873194468,0.83088067605837,0.2249738915515,0,0.0607495566580247,0.670869375198532,0.0788057072991982,0.0524545881349981,0.105600336519406,0,0.383830394638891,0,0,0.25426853765475,0,0.864221491201268,0,3.59190574687462,0.164185041498678,0.511164065356265,0.113312091520126,0.293104467356165,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,1.09613338542806,0,0,0,0,0,0.471162288750703,0,0,0,0,0,0.124192805882767,0.138348634936231,0,0.151649117541648,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0.15543720058278,0,0,0,0.155262956876259,0,0,1.04349012362347,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0.192619830407303,0,0,0,0,0.244736704506468,0.179088841081487,0,0.438568099157414,0,0.38582807654183,0.168942440653073,0,0.345430341731199,0,0.138258436151731,0,0.132864840313363,0,0.327609848846413,0.491545817507439,0,0.39997479170986,0,0,0,0.184105950251841,0.279759015438889,0,0,0.107824811396682,0.471797825567689,0.109209638192014,0,0.637724760305049,0.123935764259002,0,0,0.157723490002507,0,0,0,0.192687675289379,0,0.159633859057151,0,0.252071696221718,0.0691572524642179,0,0,0,0.353909170043221,0.183428598521679,0.231051332300676,0,0,0.397832444232549,0.0752103283492573,0.20170506870352,0,1.04762677792569,0,0.295712172434091,0.0675375846183947,0,0.413373593002368,0.0634158101939068,0,0,0,0,0,0,0,0,0.227662191351298,0,0.460935950223117,0,0,0.0657727735628491,0.236387681767936,0.111231401892069,0,0.314231179832004,0.560544326627578,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,6.7804726198006,0,0.207216164163037,0,0,0,0.118332000730565,0.170426809518315,0.846774100381858,0,0,0,1.78968690876468,0.196300467230486,0.365753774946808,0,0,0,0,0.467878926924211,0.198950775161368,0.118920090777569,0.11294608203896,0.219881033490858,0.754814217833368,0.154348316215889,0.218559560503957,0.940634592723046,0,0.235676547101626,0.196308467114945,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0,0,0.0679914901909147,0.436350690340377,0.5290268405154,0,0,0.432626562123789,0,0.218531143927391,0.253397002022874,0.305966489225945,0,0.0918948995348449,2.005660314339,1.51557396436479,0.803892390468535,0,0,0,0,0,0.0620747142958579,0,0.0636471582781649,0,0.217716747896961,0.342233301085281,0.0673520530145875,0.143444410785353,0.332660356546013,0.162806537221949,0,0,0.0898252021065869,0,0.244482888365733,0,0,0,0 | ||
|short_description=p2@YEATS4 | |||
}} | }} |
Latest revision as of 05:52, 20 September 2015
Short description: | p2@YEATS4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_YEATS4_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENST00000552955_5end |
EntrezGene: | YEATS4 |
HGNC: | 24859 |
UniProt: | F8W1B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 8.86e-17 | 1 |
seromucus secreting cell | 4.70e-09 | 2 |
epithelial cell of large intestine | 5.94e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 8.86e-17 | 1 |
epithelium of gonad | 4.70e-09 | 2 |
testis | 1.17e-08 | 8 |
gonad | 3.35e-07 | 21 |
indifferent external genitalia | 3.35e-07 | 21 |
indifferent gonad | 3.35e-07 | 21 |
gonad primordium | 3.35e-07 | 21 |
external genitalia | 6.75e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 8.86e-17 | 1 |
islet cell tumor | 2.25e-16 | 1 |
endocrine pancreas cancer | 2.25e-16 | 1 |
pancreatic endocrine carcinoma | 2.25e-16 | 1 |