FFCP PHASE1:Hg19::chr7:96635448..96635470,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1750 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2919 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-334bp_to_ENST00000493273_5end | |||
|cluster_id=chr7:96635448..96635470,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_5_at_DLX6_5end | |||
|id=chr7:96635448..96635470,+ | |||
|ontology_enrichment_celltype=CL:0000062!3.87e-10!11;CL:0000375!3.87e-10!11;CL:0000335!3.87e-10!11;CL:0000035!1.07e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000062;9.94e-16;9!CL:0000123;6.46e-07;2!CL:0000242;6.46e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,1.78e-12,11;CL:0000375,1.78e-12,11;CL:0000335,1.78e-12,11;CL:0000242,6.89e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000335;1.14e-12;11!UBERON:0010122;7.56e-08;2 | |||
|ontology_enrichment_disease=DOID:0050687!8.48e-17!143;DOID:305!9.84e-15!106;DOID:162!3.01e-12!235;DOID:14566!6.01e-12!239;DOID:3095!9.86e-09!22;DOID:2994!9.86e-09!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;9.15e-10;22!DOID:2994;9.15e-10;22!DOID:169;9.96e-09;6!DOID:5409;2.92e-07;4!DOID:1325;7.23e-07;7!DOID:3904;7.23e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.87e-12,143;DOID:3095,8.71e-10,22;DOID:2994,8.71e-10,22;DOID:162,2.04e-09,235;DOID:14566,4.94e-09,239;DOID:169,8.12e-09,6;DOID:305,5.66e-08,106;DOID:5409,2.72e-07,4;DOID:1325,6.54e-07,7;DOID:3904,6.54e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001869!4.55e-15!32;UBERON:0002780!5.82e-15!41;UBERON:0001890!5.82e-15!41;UBERON:0006240!5.82e-15!41;UBERON:0001893!6.11e-15!34;UBERON:0002791!1.97e-14!33;UBERON:0003080!2.14e-14!42;UBERON:0002020!1.20e-12!34;UBERON:0003528!1.20e-12!34;UBERON:0001950!8.79e-11!20;UBERON:0002619!1.41e-10!22;UBERON:0001049!8.94e-10!57;UBERON:0005068!8.94e-10!57;UBERON:0006241!8.94e-10!57;UBERON:0007135!8.94e-10!57;UBERON:0000073!1.28e-09!94;UBERON:0001016!1.28e-09!94;UBERON:0000955!1.58e-09!69;UBERON:0006238!1.58e-09!69;UBERON:0002616!3.69e-09!59;UBERON:0003056!4.11e-09!61;UBERON:0001017!5.41e-09!82;UBERON:0000956!8.95e-09!25;UBERON:0000203!8.95e-09!25;UBERON:0005743!4.05e-08!86;UBERON:0000033!5.93e-08!123;UBERON:0000153!6.73e-08!129;UBERON:0007811!6.73e-08!129;UBERON:0004121!1.39e-07!169;UBERON:0000924!1.80e-07!173;UBERON:0006601!1.80e-07!173;UBERON:0009663!1.86e-07!7;UBERON:0005910!3.78e-07!6;UBERON:0002420!7.44e-07!9;UBERON:0007245!7.44e-07!9;UBERON:0010009!7.44e-07!9;UBERON:0010011!7.44e-07!9;UBERON:0000454!7.44e-07!9;UBERON:0007023!9.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0009663;2.44e-16;7!UBERON:0000369;1.00e-13;4!UBERON:0002435;1.00e-13;4!UBERON:0000204;1.00e-13;4!UBERON:0002420;1.58e-12;9!UBERON:0000125;1.58e-12;9!UBERON:0007245;1.58e-12;9!UBERON:0002308;1.58e-12;9!UBERON:0010009;1.58e-12;9!UBERON:0010011;1.58e-12;9!UBERON:0000454;1.58e-12;9!UBERON:0005383;6.13e-11;3!UBERON:0005382;6.13e-11;3!UBERON:0001873;7.56e-08;2!UBERON:0002791;2.83e-07;32!UBERON:0001875;3.53e-07;2!UBERON:0006514;3.53e-07;2!UBERON:0001869;5.30e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0009663,2.41e-16,7;UBERON:0000369,1.15e-13,4;UBERON:0002435,1.15e-13,4;UBERON:0000204,1.15e-13,4;UBERON:0010082,1.15e-13,4;UBERON:0002420,1.56e-12,9;UBERON:0000125,1.56e-12,9;UBERON:0007245,1.56e-12,9;UBERON:0002308,1.56e-12,9;UBERON:0010009,1.56e-12,9;UBERON:0010011,1.56e-12,9;UBERON:0000454,1.56e-12,9;UBERON:0005383,6.18e-11,3;UBERON:0005382,6.18e-11,3;UBERON:0001873,7.60e-08,2;UBERON:0010122,7.60e-08,2;UBERON:0002791,2.95e-07,32;UBERON:0001869,2.95e-07,32;UBERON:0001875,3.04e-07,2;UBERON:0006514,3.04e-07,2;UBERON:0003528,9.89e-07,34;UBERON:0002020,9.89e-07,34;UBERON:0001893,9.89e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579386075843295,0,0.973269740605272,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614942192715568,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,1.41849132023278,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,2.40756879782175,4.5481500811197,1.03473071292505,0.664225598535437,0.737476674166813,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.725156697549733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,2.47237555009527,1.23764249880882,0,0.650060246036521,0,0,0.154048617114644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31801321087491,0.86101074534246,1.68471475667626,1.33029046061003,0.918893600827838,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,1.18504244461122,0,0,4.25846237690326,0,0.921722292925374,0.223676107892416,0.834245708559542,0,0,0,0,0,0,2.05854594449042,0,0.970884173996107,0,0,0.23874448473769,0.296964680832639,0,0,0.140669416410513,0,0,9.07839254950372,0,0,1.0077309914171,0,0,0,0,0,0,0,0,0,0,0.74214478529481,1.99613798001194,0,0,0,0.910347586283997,0,1.41832609060762,0,1.74962768029953,0,19.4863104879045,6.75340056302285,0,0,0,0.219385397153973,0,0.278847488557207,0.307801034015188,0,4.38071418337314,2.69272933229316,1.3037684630641,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0.424059214301822,0,0,0,0,0,0,0,0.202203398942031,0,2.81117334870407,0,1.17398771359254,0.242780379534093,0,0,0.30607276163049,0.505492637027904,0.300646838828985,1.65901106235595,1.32930774541437,0,0.627865836814451,1.19472429772959,0,0,0.520679215005393,0,0.174118413160805,0.34945333648406,0,0,0,0,0,0.0882561266915003,0.225980740780532,0.548167698587004,0.19871461170299,0.633107959558787,0.977756913674015,0.0801588202515337,0,0,1.87317542300338,0.343609788497747,2.23073497220554,0,0,0.707082103850386,0,0,0,0,7.80546375322726,1.50595916781192,0,0.859530882839914,0,0,0,0,0.399358000997982,0,0,0,0,2.32991899054908,0.945398187686684,0.576911008668165,0.943649613958588,0.492137407573744,0,0,0.136203406111576,0,0,0,0,0,0.607495566580247,0,0,0,0.105600336519406,0.179287339332845,1.34340638123612,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121792598380896,0,0,0,0,0,2.19875734750328,0.886068179966986,1.34228891392159,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,1.24980407962107,0,0,0,1.40500471742064,2.3187364577732,0,0,0,0.189403005275089,0.50313580350515,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463044948647668,0.489473409012935,0,0.617602894321944,0.657852148736121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.24366922344972,5.17559094704073,1.72992536041486,0.109209638192014,0.169732529954025,0,0,0,0,0,0,0,0,2.31225210347254,1.41696576325585,0.478901577171454,1.02558182120378,0,0.414943514785307,0.807378228159255,0,0.588886311006154,1.76954585021611,0,0.115525666150338,0,1.3807198521202,4.37615688655804,0,1.81534561833168,0,3.14288033377707,0,0,0.135075169236789,0.781078098613847,0.826747186004736,0.317079050969534,1.64092442705466,0,0,0,1.66091155931474,0,0,0,0,2.48366636455389,0,0,0,0.131545547125698,0.118193840883968,0,0,8.1700106756321,0,0,0,0,0,1.26410889386181,0,2.43401581223611,0,0,1.87790324803345,2.07377898544228,0,0,0.0852134047591577,0.423387050190929,0.22910686854405,0,0,1.78968690876468,0.883352102537187,0,0,0,0,0,2.80727356154527,0,1.30812099855325,4.63078936359736,0.769583617218004,1.66059127923341,0,0,4.70317296361523,0,3.06379511232114,0,0,0,0.509781344063451,0,0,0,0.71421575442263,0,0,0.730336388246517,0,0,0,0.475940431336403,0,0,0,0,0,1.26166424835079,2.73163929909239,0.253397002022874,0,0.26721740526556,0.18378979906969,0.250707539292375,0.378893491091197,1.07185652062471,0.829169439458779,0.827463966895162,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0,0,0,0.0673520530145875,0.0717222053926763,0,2.36069478971826,0.213454691755431,0,0.359300808426348,0,0.488965776731466,0,0,0.201273793591026,0 | |||
|short_description=p5@DLX6 | |||
}} |
Latest revision as of 06:01, 20 September 2015
Short description: | p5@DLX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_DLX6_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -334bp_to_ENST00000493273_5end |
EntrezGene: | DLX6 |
HGNC: | 2919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 1.78e-12 | 11 |
osteoprogenitor cell | 1.78e-12 | 11 |
mesenchyme condensation cell | 1.78e-12 | 11 |
Merkel cell | 6.89e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
telencephalic nucleus | 2.41e-16 | 7 |
corpus striatum | 1.15e-13 | 4 |
striatum | 1.15e-13 | 4 |
ventral part of telencephalon | 1.15e-13 | 4 |
future corpus striatum | 1.15e-13 | 4 |
basal ganglion | 1.56e-12 | 9 |
neural nucleus | 1.56e-12 | 9 |
nuclear complex of neuraxis | 1.56e-12 | 9 |
nucleus of brain | 1.56e-12 | 9 |
aggregate regional part of brain | 1.56e-12 | 9 |
collection of basal ganglia | 1.56e-12 | 9 |
cerebral subcortex | 1.56e-12 | 9 |
caudate-putamen | 6.18e-11 | 3 |
dorsal striatum | 6.18e-11 | 3 |
caudate nucleus | 7.60e-08 | 2 |
future caudate nucleus | 7.60e-08 | 2 |
regional part of telencephalon | 2.95e-07 | 32 |
cerebral hemisphere | 2.95e-07 | 32 |
globus pallidus | 3.04e-07 | 2 |
pallidum | 3.04e-07 | 2 |
brain grey matter | 9.89e-07 | 34 |
gray matter | 9.89e-07 | 34 |
telencephalon | 9.89e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.87e-12 | 143 |
germ cell and embryonal cancer | 8.71e-10 | 22 |
germ cell cancer | 8.71e-10 | 22 |
cancer | 2.04e-09 | 235 |
disease of cellular proliferation | 4.94e-09 | 239 |
neuroendocrine tumor | 8.12e-09 | 6 |
carcinoma | 5.66e-08 | 106 |
lung small cell carcinoma | 2.72e-07 | 4 |
bronchus cancer | 6.54e-07 | 7 |
bronchogenic carcinoma | 6.54e-07 | 7 |