FFCP PHASE1:Hg19::chr7:96635665..96635685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1750 | |EntrezGene=1750 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2919 | |HGNC=2919 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-119bp_to_ENST00000493273_5end | |association_with_transcript=-119bp_to_ENST00000493273_5end | ||
|cluster_id=chr7:96635665..96635685,+ | |||
|coexpression_cluster_id=C35 | |||
|description=CAGE_peak_6_at_DLX6_5end | |description=CAGE_peak_6_at_DLX6_5end | ||
|id=chr7:96635665..96635685,+ | |id=chr7:96635665..96635685,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000062;2.04e-12;9!CL:0002541;2.47e-10;3!CL:0000313;2.25e-08;1!CL:1001319;4.56e-08;1!CL:1000600;4.56e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,2.25e-10,3;CL:0000062,4.05e-10,11;CL:0000375,4.05e-10,11;CL:0000335,4.05e-10,11;CL:0000313,2.17e-08,1;CL:1001319,2.89e-08,1;CL:1000600,2.89e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.15e-15;2!CL:0000335;3.45e-10;11!UBERON:0006222;1.57e-08;1!UBERON:0003124;4.56e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.89e-14!143;DOID:305!3.33e-13!106;DOID:162!3.79e-09!235;DOID:14566!1.16e-08!239;DOID:1749!1.60e-08!14;DOID:5409!6.13e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:2152;2.25e-08;1!DOID:1799;4.56e-08;1!DOID:10165;4.56e-08;1!DOID:1798;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,2.17e-08,1;DOID:1799,4.41e-08,1;DOID:10165,4.41e-08,1;DOID:1798,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002780!5.55e-17!41;UBERON:0001890!5.55e-17!41;UBERON:0006240!5.55e-17!41;UBERON:0003080!2.03e-16!42;UBERON:0001893!1.31e-15!34;UBERON:0001869!2.61e-15!32;UBERON:0002791!1.48e-14!33;UBERON:0002020!1.46e-12!34;UBERON:0003528!1.46e-12!34;UBERON:0003056!1.89e-11!61;UBERON:0000073!2.07e-10!94;UBERON:0001016!2.07e-10!94;UBERON:0001049!2.12e-10!57;UBERON:0005068!2.12e-10!57;UBERON:0006241!2.12e-10!57;UBERON:0007135!2.12e-10!57;UBERON:0001017!2.58e-10!82;UBERON:0009663!2.90e-10!7;UBERON:0002420!3.77e-10!9;UBERON:0007245!3.77e-10!9;UBERON:0010009!3.77e-10!9;UBERON:0010011!3.77e-10!9;UBERON:0000454!3.77e-10!9;UBERON:0002616!7.74e-10!59;UBERON:0000955!8.37e-10!69;UBERON:0006238!8.37e-10!69;UBERON:0001950!1.27e-09!20;UBERON:0005743!1.77e-09!86;UBERON:0000369!6.67e-09!4;UBERON:0002435!6.67e-09!4;UBERON:0000204!6.67e-09!4;UBERON:0010082!6.67e-09!4;UBERON:0002619!1.61e-08!22;UBERON:0007023!2.25e-08!115;UBERON:0003075!3.06e-08!86;UBERON:0007284!3.06e-08!86;UBERON:0002308!1.00e-07!9;UBERON:0000125!1.00e-07!9;UBERON:0002346!1.46e-07!90;UBERON:0000033!1.61e-07!123;UBERON:0000153!2.66e-07!129;UBERON:0007811!2.66e-07!129;UBERON:0000956!3.39e-07!25;UBERON:0000203!3.39e-07!25;UBERON:0005383!4.19e-07!3;UBERON:0005382!4.19e-07!3;UBERON:0004121!5.84e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0000369;2.53e-29;4!UBERON:0002435;2.53e-29;4!UBERON:0000204;2.53e-29;4!UBERON:0009663;9.25e-26;7!UBERON:0005383;1.49e-22;3!UBERON:0005382;1.49e-22;3!UBERON:0002420;5.23e-20;9!UBERON:0000125;5.23e-20;9!UBERON:0007245;5.23e-20;9!UBERON:0002308;5.23e-20;9!UBERON:0010009;5.23e-20;9!UBERON:0010011;5.23e-20;9!UBERON:0000454;5.23e-20;9!UBERON:0001873;1.15e-15;2!UBERON:0003124;2.47e-10;3!UBERON:0000920;2.47e-10;3!UBERON:0001874;1.22e-08;1!UBERON:0001882;1.57e-08;1!UBERON:0005403;1.57e-08;1!UBERON:0004911;2.25e-08;1!UBERON:0004645;4.56e-08;1!UBERON:0001256;4.56e-08;1!UBERON:0001259;4.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.13e-29,4;UBERON:0002435,2.13e-29,4;UBERON:0000204,2.13e-29,4;UBERON:0010082,2.13e-29,4;UBERON:0009663,8.82e-26,7;UBERON:0005383,1.39e-22,3;UBERON:0005382,1.39e-22,3;UBERON:0002420,5.04e-20,9;UBERON:0000125,5.04e-20,9;UBERON:0007245,5.04e-20,9;UBERON:0002308,5.04e-20,9;UBERON:0010009,5.04e-20,9;UBERON:0010011,5.04e-20,9;UBERON:0000454,5.04e-20,9;UBERON:0001873,1.07e-15,2;UBERON:0010122,1.07e-15,2;UBERON:0000920,2.25e-10,3;UBERON:0003124,1.49e-09,7;UBERON:0001874,1.22e-08,1;UBERON:0001882,1.41e-08,1;UBERON:0005403,1.41e-08,1;UBERON:0004911,2.17e-08,1;UBERON:0004645,2.89e-08,1;UBERON:0001256,2.89e-08,1;UBERON:0001259,2.89e-08,1;UBERON:0002780,1.42e-07,41;UBERON:0001890,1.42e-07,41;UBERON:0003080,1.42e-07,41;UBERON:0006240,1.42e-07,41 | |||
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| ||
|short_description=p6@DLX6 | |short_description=p6@DLX6 | ||
}} | }} |
Latest revision as of 06:03, 20 September 2015
Short description: | p6@DLX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_DLX6_5end |
Coexpression cluster: | C35_caudate_putamen_diencephalon_nucleus_globus_thalamus_insula |
Association with transcript: | -119bp_to_ENST00000493273_5end |
EntrezGene: | DLX6 |
HGNC: | 2919 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 2.25e-10 | 3 |
osteoblast | 4.05e-10 | 11 |
osteoprogenitor cell | 4.05e-10 | 11 |
mesenchyme condensation cell | 4.05e-10 | 11 |
serous secreting cell | 2.17e-08 | 1 |
bladder cell | 2.89e-08 | 1 |
lower urinary tract cell | 2.89e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.13e-29 | 4 |
striatum | 2.13e-29 | 4 |
ventral part of telencephalon | 2.13e-29 | 4 |
future corpus striatum | 2.13e-29 | 4 |
telencephalic nucleus | 8.82e-26 | 7 |
caudate-putamen | 1.39e-22 | 3 |
dorsal striatum | 1.39e-22 | 3 |
basal ganglion | 5.04e-20 | 9 |
neural nucleus | 5.04e-20 | 9 |
nuclear complex of neuraxis | 5.04e-20 | 9 |
nucleus of brain | 5.04e-20 | 9 |
aggregate regional part of brain | 5.04e-20 | 9 |
collection of basal ganglia | 5.04e-20 | 9 |
cerebral subcortex | 5.04e-20 | 9 |
caudate nucleus | 1.07e-15 | 2 |
future caudate nucleus | 1.07e-15 | 2 |
egg chorion | 2.25e-10 | 3 |
chorion | 1.49e-09 | 7 |
putamen | 1.22e-08 | 1 |
nucleus accumbens | 1.41e-08 | 1 |
ventral striatum | 1.41e-08 | 1 |
epithelium of female gonad | 2.17e-08 | 1 |
urinary bladder urothelium | 2.89e-08 | 1 |
wall of urinary bladder | 2.89e-08 | 1 |
mucosa of urinary bladder | 2.89e-08 | 1 |
regional part of forebrain | 1.42e-07 | 41 |
forebrain | 1.42e-07 | 41 |
anterior neural tube | 1.42e-07 | 41 |
future forebrain | 1.42e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 2.17e-08 | 1 |
islet cell tumor | 4.41e-08 | 1 |
endocrine pancreas cancer | 4.41e-08 | 1 |
pancreatic endocrine carcinoma | 4.41e-08 | 1 |