FFCP PHASE1:Hg19::chr22:38142239..38142297,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:38142239..38142297,+
|short_description=p1@TRIOBP
|description=CAGE_peak_1_at_TRIOBP_5end
|association_with_transcript=0bp_to_ENST00000403663,ENST00000428...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11078 | |EntrezGene=11078 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17009 | |HGNC=17009 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6V6,Q9H2D6,F2Z2W0 | |UniProt=F8W6V6,Q9H2D6,F2Z2W0 | ||
|association_with_transcript=0bp_to_ENST00000403663,ENST00000428075,NM_007032,NM_138632,uc003atv.2,uc003atw.2_5end | |||
|cluster_id=chr22:38142239..38142297,+ | |||
|description=CAGE_peak_1_at_TRIOBP_5end | |||
|id=chr22:38142239..38142297,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.34e-21!180;CL:0000222!8.09e-18!119;CL:0000183!3.10e-17!59;CL:0000680!2.80e-15!57;CL:0000056!2.80e-15!57;CL:0000355!2.80e-15!57;CL:0000187!5.72e-15!54;CL:0000057!1.39e-13!75;CL:0002371!2.45e-12!591;CL:0000192!3.12e-12!42;CL:0000514!3.12e-12!42;CL:0000393!7.48e-11!60;CL:0000211!7.48e-11!60;CL:0000144!6.92e-10!625;CL:0000220!2.37e-09!246;CL:0002321!4.24e-09!248;CL:0000359!1.70e-08!32;CL:0002078!3.47e-07!44;CL:0000548!7.28e-07!679;CL:0000004!7.28e-07!679;CL:0000255!7.28e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0000187;3.23e-09;55!CL:0000192;3.25e-09;43!CL:0000134;5.04e-08;55!CL:0000359;5.08e-08;32!CL:0000723;1.72e-07;61!CL:0000048;4.81e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.53e-18,121;CL:0000680,1.09e-15,58;CL:0000056,1.09e-15,58;CL:0000355,1.09e-15,58;CL:0000187,2.22e-15,55;CL:0000057,6.87e-14,76;CL:0000192,1.23e-12,43;CL:0000514,1.23e-12,43;CL:0000393,3.21e-11,61;CL:0000211,3.21e-11,61;CL:0002321,1.46e-09,250;CL:0000359,1.70e-08,32;CL:0002078,1.71e-07,45;CL:0000115,8.02e-07,36 | |||
|ontology_enrichment_development_v019=CL:0000514;3.25e-09;43!CL:0000355;7.83e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.88e-18!143;UBERON:0002049!3.93e-18!79;UBERON:0007798!3.93e-18!79;UBERON:0001009!8.60e-18!113;UBERON:0000914!1.39e-17!83;UBERON:0002329!1.39e-17!83;UBERON:0003077!1.39e-17!83;UBERON:0003059!1.39e-17!83;UBERON:0007282!1.39e-17!83;UBERON:0009618!1.39e-17!83;UBERON:0007285!1.39e-17!83;UBERON:0004872!2.06e-17!84;UBERON:0004290!7.83e-17!70;UBERON:0004535!7.94e-17!110;UBERON:0003914!2.62e-16!118;UBERON:0000486!6.63e-16!82;UBERON:0001134!6.01e-15!61;UBERON:0002036!6.01e-15!61;UBERON:0003082!6.01e-15!61;UBERON:0000926!6.05e-15!448;UBERON:0004120!6.05e-15!448;UBERON:0006603!6.05e-15!448;UBERON:0002385!6.27e-15!63;UBERON:0001015!6.27e-15!63;UBERON:0000383!6.27e-15!63;UBERON:0000055!2.79e-14!69;UBERON:0000490!1.13e-13!138;UBERON:0002100!3.12e-13!216;UBERON:0001981!9.98e-13!60;UBERON:0007500!9.98e-13!60;UBERON:0004537!9.98e-13!60;UBERON:0006965!9.98e-13!60;UBERON:0000468!2.16e-11!659;UBERON:0003104!1.24e-10!238;UBERON:0009142!1.24e-10!238;UBERON:0000467!9.97e-10!625;UBERON:0000480!1.35e-09!626;UBERON:0001637!3.51e-09!42;UBERON:0003509!3.51e-09!42;UBERON:0004572!3.51e-09!42;UBERON:0003081!1.35e-08!216;UBERON:0007100!1.10e-07!27;UBERON:0004573!2.13e-07!33;UBERON:0004571!2.13e-07!33;UBERON:0003103!2.25e-07!69;UBERON:0000119!2.58e-07!312;UBERON:0000481!5.28e-07!347;UBERON:0000483!6.90e-07!309;UBERON:0000948!9.95e-07!24;UBERON:0005498!9.95e-07!24;UBERON:0004140!9.95e-07!24;UBERON:0009881!9.95e-07!24;UBERON:0004141!9.95e-07!24;UBERON:0003084!9.95e-07!24;UBERON:0007005!9.95e-07!24;UBERON:0004139!9.95e-07!24;UBERON:0004291!9.95e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0002049;1.24e-07;75!UBERON:0007798;1.24e-07;75!UBERON:0007100;2.62e-07;25!UBERON:0007500;3.87e-07;56!UBERON:0001981;3.87e-07;56!UBERON:0004537;3.87e-07;56!UBERON:0000055;5.97e-07;65!UBERON:0001637;7.52e-07;42!UBERON:0003509;7.52e-07;42!UBERON:0004572;7.52e-07;42!UBERON:0004573;8.79e-07;33!UBERON:0004571;8.79e-07;33 | |||
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| ||
|short_description=p1@TRIOBP | |||
}} | }} |
Latest revision as of 06:11, 20 September 2015
Short description: | p1@TRIOBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIOBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000403663, ENST00000428075, NM_007032, NM_138632, uc003atv.2, uc003atw.2_5end |
EntrezGene: | TRIOBP |
HGNC: | 17009 |
UniProt: | F8W6V6Q9H2D6F2Z2W0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.53e-18 | 121 |
muscle precursor cell | 1.09e-15 | 58 |
myoblast | 1.09e-15 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-15 | 58 |
muscle cell | 2.22e-15 | 55 |
fibroblast | 6.87e-14 | 76 |
smooth muscle cell | 1.23e-12 | 43 |
smooth muscle myoblast | 1.23e-12 | 43 |
electrically responsive cell | 3.21e-11 | 61 |
electrically active cell | 3.21e-11 | 61 |
embryonic cell | 1.46e-09 | 250 |
vascular associated smooth muscle cell | 1.70e-08 | 32 |
meso-epithelial cell | 1.71e-07 | 45 |
endothelial cell | 8.02e-07 | 36 |