FFCP PHASE1:Hg19::chr6:123958111..123958139,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10345 | |EntrezGene=10345 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12261 | |HGNC=12261 | ||
|TSSclassifier=strong | |||
|UniProt=F5H6E3 | |UniProt=F5H6E3 | ||
|association_with_transcript=0bp_to_ENST00000542443_5end | |association_with_transcript=0bp_to_ENST00000542443_5end | ||
|cluster_id=chr6:123958111..123958139,- | |||
|coexpression_cluster_id=C31 | |coexpression_cluster_id=C31 | ||
|description=CAGE_peak_2_at_TRDN_5end | |description=CAGE_peak_2_at_TRDN_5end | ||
|id=chr6:123958111..123958139,- | |id=chr6:123958111..123958139,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;4.93e-12;3!UBERON:0003057;4.93e-12;3!UBERON:0005062;2.86e-10;4!UBERON:0007284;2.86e-10;4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;2.38e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.33e-09,2 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007100;6.03e-15;25!UBERON:0004151;1.39e-13;3!UBERON:0003978;1.51e-13;3!UBERON:0000946;1.51e-13;3!UBERON:0002240;4.93e-12;3!UBERON:0005174;4.93e-12;3!UBERON:0001137;4.93e-12;3!UBERON:0005090;5.29e-10;2!UBERON:0001630;5.29e-10;2!UBERON:0000341;9.64e-10;2!UBERON:0002081;1.57e-09;2!UBERON:0002133;1.63e-09;2!UBERON:0003127;2.75e-09;2!UBERON:0000948;1.82e-08;22!UBERON:0007023;4.69e-07;114!UBERON:0001723;6.78e-07;3!UBERON:0001033;6.78e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.70e-23,114;UBERON:0003103,2.06e-15,68;UBERON:0007100,1.14e-13,27;UBERON:0004151,1.36e-13,3;UBERON:0003978,1.48e-13,3;UBERON:0009751,1.48e-13,3;UBERON:0000946,1.48e-13,3;UBERON:0002523,1.48e-13,3;UBERON:0005983,1.48e-13,3;UBERON:0002165,1.48e-13,3;UBERON:0002062,1.48e-13,3;UBERON:0007280,1.48e-13,3;UBERON:0002240,4.65e-12,3;UBERON:0005174,4.65e-12,3;UBERON:0001137,4.65e-12,3;UBERON:0005090,5.29e-10,2;UBERON:0001630,5.29e-10,2;UBERON:0000341,9.64e-10,2;UBERON:0002081,1.54e-09,2;UBERON:0010227,1.54e-09,2;UBERON:0002133,1.60e-09,2;UBERON:0003127,2.99e-09,2;UBERON:0000948,1.17e-07,24;UBERON:0005498,1.17e-07,24;UBERON:0004140,1.17e-07,24;UBERON:0009881,1.17e-07,24;UBERON:0004141,1.17e-07,24;UBERON:0003084,1.17e-07,24;UBERON:0007005,1.17e-07,24;UBERON:0004139,1.17e-07,24;UBERON:0004291,1.17e-07,24;UBERON:0010314,2.35e-07,132;UBERON:0001723,6.78e-07,3;UBERON:0001033,6.78e-07,3;UBERON:0010056,6.78e-07,3 | |||
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| ||
|short_description=p2@TRDN | |short_description=p2@TRDN | ||
}} | }} |
Latest revision as of 06:17, 20 September 2015
Short description: | p2@TRDN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TRDN_5end |
Coexpression cluster: | C31_skeletal_tongue_diaphragm_throat_penis_skin_trachea |
Association with transcript: | 0bp_to_ENST00000542443_5end |
EntrezGene: | TRDN |
HGNC: | 12261 |
UniProt: | F5H6E3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 3.70e-23 | 114 |
compound organ | 2.06e-15 | 68 |
primary circulatory organ | 1.14e-13 | 27 |
cardiac chamber | 1.36e-13 | 3 |
valve | 1.48e-13 | 3 |
cardiac mesenchyme | 1.48e-13 | 3 |
cardial valve | 1.48e-13 | 3 |
tunica intima | 1.48e-13 | 3 |
heart layer | 1.48e-13 | 3 |
endocardium | 1.48e-13 | 3 |
endocardial cushion | 1.48e-13 | 3 |
presumptive endocardium | 1.48e-13 | 3 |
spinal cord | 4.65e-12 | 3 |
dorsal region element | 4.65e-12 | 3 |
dorsum | 4.65e-12 | 3 |
muscle structure | 5.29e-10 | 2 |
muscle organ | 5.29e-10 | 2 |
throat | 9.64e-10 | 2 |
cardiac atrium | 1.54e-09 | 2 |
future cardiac atrium | 1.54e-09 | 2 |
atrioventricular valve | 1.60e-09 | 2 |
open tracheal system trachea | 2.99e-09 | 2 |
heart | 1.17e-07 | 24 |
primitive heart tube | 1.17e-07 | 24 |
primary heart field | 1.17e-07 | 24 |
anterior lateral plate mesoderm | 1.17e-07 | 24 |
heart tube | 1.17e-07 | 24 |
heart primordium | 1.17e-07 | 24 |
cardiac mesoderm | 1.17e-07 | 24 |
cardiogenic plate | 1.17e-07 | 24 |
heart rudiment | 1.17e-07 | 24 |
structure with developmental contribution from neural crest | 2.35e-07 | 132 |
tongue | 6.78e-07 | 3 |
gustatory system | 6.78e-07 | 3 |
future tongue | 6.78e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.33e-09 | 2 |