FFCP PHASE1:Hg19::chr10:99185993..99186014,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=5223 | |EntrezGene=5223 | ||
Line 8: | Line 8: | ||
|UniProt=P18669,Q6FHU2 | |UniProt=P18669,Q6FHU2 | ||
|association_with_transcript=-12bp_to_NM_002629,uc001knh.2,uc009xvo.2_5end | |association_with_transcript=-12bp_to_NM_002629,uc001knh.2,uc009xvo.2_5end | ||
|cluster_id=chr10:99185993..99186014,+ | |||
|coexpression_cluster_id=C3065 | |coexpression_cluster_id=C3065 | ||
|description=CAGE_peak_1_at_PGAM1_5end | |description=CAGE_peak_1_at_PGAM1_5end |
Latest revision as of 06:29, 20 September 2015
Short description: | p1@PGAM1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PGAM1_5end |
Coexpression cluster: | C3065_anaplastic_Prostate_iPS_HES3GFP_Urothelial_Alveolar_H9 |
Association with transcript: | -12bp_to_NM_002629, uc001knh.2, uc009xvo.2_5end |
EntrezGene: | PGAM1 |
HGNC: | 8888 |
UniProt: | P18669Q6FHU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@PGAM1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.23e-14 | 121 |
embryonic cell | 9.12e-14 | 250 |
electrically responsive cell | 1.55e-12 | 61 |
electrically active cell | 1.55e-12 | 61 |
muscle precursor cell | 2.44e-12 | 58 |
myoblast | 2.44e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.44e-12 | 58 |
muscle cell | 1.22e-11 | 55 |
smooth muscle cell | 1.88e-11 | 43 |
smooth muscle myoblast | 1.88e-11 | 43 |
Showing 1 to 10 of 12 entries
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 7.73e-15 | 78 |
multilaminar epithelium | 1.75e-13 | 83 |
dense mesenchyme tissue | 5.52e-13 | 73 |
paraxial mesoderm | 5.72e-13 | 72 |
presumptive paraxial mesoderm | 5.72e-13 | 72 |
somite | 1.04e-12 | 71 |
presomitic mesoderm | 1.04e-12 | 71 |
presumptive segmental plate | 1.04e-12 | 71 |
dermomyotome | 1.04e-12 | 71 |
trunk paraxial mesoderm | 1.04e-12 | 71 |
Showing 1 to 10 of 35 entries