FFCP PHASE1:Hg19::chr12:70004523..70004545,-: Difference between revisions
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|id=chr12:70004523..70004545,-
|short_description=p3@LRRC10
|description=CAGE_peak_3_at_LRRC10_5end
|association_with_transcript=0bp_to_AK123908,BC106892,BC106893_5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=376132 | |EntrezGene=376132 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20264 | |HGNC=20264 | ||
|TSSclassifier=strong | |||
|UniProt=Q5BKY1,Q3B873,Q3KP57 | |UniProt=Q5BKY1,Q3B873,Q3KP57 | ||
|association_with_transcript=0bp_to_AK123908,BC106892,BC106893_5end | |||
|cluster_id=chr12:70004523..70004545,- | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_3_at_LRRC10_5end | |||
|id=chr12:70004523..70004545,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;9.37e-99;1!UBERON:0004140;2.55e-98;1!UBERON:0004872;1.91e-15;7 | |||
|ontology_enrichment_disease=DOID:114!8.28e-14!2;DOID:1287!1.49e-07!4 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003978!7.70e-34!3;UBERON:0009751!7.70e-34!3;UBERON:0000946!7.70e-34!3;UBERON:0002523!7.70e-34!3;UBERON:0005983!7.70e-34!3;UBERON:0002165!7.70e-34!3;UBERON:0002062!7.70e-34!3;UBERON:0007280!7.70e-34!3;UBERON:0007100!4.19e-33!27;UBERON:0002079!2.16e-26!1;UBERON:0002135!4.61e-26!1;UBERON:0002146!5.93e-26!1;UBERON:0005623!5.93e-26!1;UBERON:0000948!4.61e-17!24;UBERON:0005498!4.61e-17!24;UBERON:0004140!4.61e-17!24;UBERON:0009881!4.61e-17!24;UBERON:0004141!4.61e-17!24;UBERON:0003084!4.61e-17!24;UBERON:0007005!4.61e-17!24;UBERON:0004139!4.61e-17!24;UBERON:0004291!4.61e-17!24;UBERON:0002081!6.43e-14!2;UBERON:0002133!9.40e-14!2;UBERON:0003103!4.36e-13!69;UBERON:0001009!8.97e-11!113;UBERON:0007023!1.47e-10!115;UBERON:0004151!1.01e-09!3;UBERON:0002342!4.66e-08!14;UBERON:0005062!4.66e-08!14;UBERON:0004872!1.26e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0002079;9.37e-99;1!UBERON:0002081;2.74e-50;2!UBERON:0004151;4.27e-34;3!UBERON:0000948;3.41e-19;22!UBERON:0007100;4.64e-17;25!UBERON:0003103;1.54e-08;61!UBERON:0001009;4.45e-07;112 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002079,9.37e-99,1;UBERON:0002081,2.74e-50,2;UBERON:0010227,2.74e-50,2;UBERON:0004151,4.27e-34,3;UBERON:0000948,1.03e-17,24;UBERON:0005498,1.03e-17,24;UBERON:0004140,1.03e-17,24;UBERON:0009881,1.03e-17,24;UBERON:0004141,1.03e-17,24;UBERON:0003084,1.03e-17,24;UBERON:0007005,1.03e-17,24;UBERON:0004139,1.03e-17,24;UBERON:0004291,1.03e-17,24;UBERON:0007100,6.71e-16,27;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p3@LRRC10 | |||
}} | }} |
Latest revision as of 06:32, 20 September 2015
Short description: | p3@LRRC10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LRRC10_5end |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | 0bp_to_AK123908, BC106892, BC106893_5end |
EntrezGene: | LRRC10 |
HGNC: | 20264 |
UniProt: | Q5BKY1Q3B873Q3KP57 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
left cardiac atrium | 9.37e-99 | 1 |
cardiac atrium | 2.74e-50 | 2 |
future cardiac atrium | 2.74e-50 | 2 |
cardiac chamber | 4.27e-34 | 3 |
heart | 1.03e-17 | 24 |
primitive heart tube | 1.03e-17 | 24 |
primary heart field | 1.03e-17 | 24 |
anterior lateral plate mesoderm | 1.03e-17 | 24 |
heart tube | 1.03e-17 | 24 |
heart primordium | 1.03e-17 | 24 |
cardiac mesoderm | 1.03e-17 | 24 |
cardiogenic plate | 1.03e-17 | 24 |
heart rudiment | 1.03e-17 | 24 |
primary circulatory organ | 6.71e-16 | 27 |
compound organ | 4.47e-07 | 68 |