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FFCP PHASE1:Hg19::chr22:38380543..38380569,-: Difference between revisions

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{{FFCP
{{FFCP
|DPIdataset=robustDPI
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=6663
|EntrezGene=6663
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=11190
|HGNC=11190
|TSSclassifier=S
|TSSclassifier=strong
|UniProt=P56693
|UniProt=P56693
|association_with_transcript=0bp_to_ENST00000396884_5end
|association_with_transcript=0bp_to_ENST00000396884_5end
|cluster_id=chr22:38380543..38380569,-
|coexpression_cluster_id=C327
|coexpression_cluster_id=C327
|description=CAGE_peak_1_at_SOX10_5end
|description=CAGE_peak_1_at_SOX10_5end

Latest revision as of 07:06, 20 September 2015

Short description:p1@SOX10
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_1_at_SOX10_5end
Coexpression cluster:C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic
Association with transcript: 0bp_to_ENST00000396884_5end
EntrezGene:SOX10
HGNC: 11190
UniProt: P56693
Genome view:ZENBU


View on UCSC genome browser


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data