FFCP PHASE1:Hg19::chr17:39928947..39928958,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3728 | |EntrezGene=3728 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6207 | |HGNC=6207 | ||
|TSSclassifier=strong | |||
|UniProt=C9J826 | |UniProt=C9J826 | ||
|association_with_transcript=-426bp_to_ENST00000420370_5end | |association_with_transcript=-426bp_to_ENST00000420370_5end | ||
|cluster_id=chr17:39928947..39928958,- | |||
|coexpression_cluster_id=C133 | |coexpression_cluster_id=C133 | ||
|description=CAGE_peak_19_at_JUP_5end | |description=CAGE_peak_19_at_JUP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0000181!2.74e-19!12;CL:0000417!2.74e-19!12;CL:0000668!2.74e-19!12;CL:0000414!2.74e-19!12;CL:0000412!2.74e-19!12;CL:0000182!2.74e-19!12;CL:0000223!2.62e-11!59;CL:0002563!5.71e-10!4 | |ontology_enrichment_celltype=CL:0000181!2.74e-19!12;CL:0000417!2.74e-19!12;CL:0000668!2.74e-19!12;CL:0000414!2.74e-19!12;CL:0000412!2.74e-19!12;CL:0000182!2.74e-19!12;CL:0000223!2.62e-11!59;CL:0002563!5.71e-10!4 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.17e-19;11!UBERON:0009497;3.31e-16;13!UBERON:0003104;1.25e-07;31!UBERON:0001041;1.25e-07;30 | |ontology_enrichment_development_v019=UBERON:0004161;6.17e-19;11!UBERON:0009497;3.31e-16;13!UBERON:0003104;1.25e-07;31!UBERON:0001041;1.25e-07;30 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | |ontology_enrichment_disease_v019=DOID:3493;4.32e-26;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,4.32e-26,2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;6.77e-15;31!UBERON:0002330;6.77e-15;31!UBERON:0002368;1.76e-12;33!UBERON:0000949;4.30e-09;43!UBERON:0005172;1.76e-07;52!UBERON:0005173;1.76e-07;52 | |ontology_enrichment_uberon_v019=UBERON:0002107;3.46e-24;19!UBERON:0006925;3.46e-24;19!UBERON:0002423;1.23e-18;25!UBERON:0002365;6.77e-15;31!UBERON:0002330;6.77e-15;31!UBERON:0002368;1.76e-12;33!UBERON:0000949;4.30e-09;43!UBERON:0005172;1.76e-07;52!UBERON:0005173;1.76e-07;52 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.46e-24,19;UBERON:0006925,3.46e-24,19;UBERON:0008836,3.46e-24,19;UBERON:0008835,4.90e-21,22;UBERON:0003894,4.90e-21,22;UBERON:0009854,3.62e-20,23;UBERON:0007499,1.23e-18,25;UBERON:0009497,1.23e-18,25;UBERON:0000015,1.23e-18,25;UBERON:0002423,1.23e-18,25;UBERON:0006235,1.23e-18,25;UBERON:0004161,1.23e-18,25;UBERON:0009856,5.83e-18,26;UBERON:0002365,3.16e-15,31;UBERON:0002330,3.16e-15,31;UBERON:0002368,1.35e-13,35;UBERON:0000949,8.78e-11,45;UBERON:0003929,3.93e-09,54;UBERON:0005172,3.93e-09,54;UBERON:0005173,3.93e-09,54;UBERON:0002530,1.98e-08,59;UBERON:0002417,2.64e-08,60;UBERON:0000916,2.64e-08,60 | |||
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|short_description=p19@JUP | |short_description=p19@JUP | ||
}} | }} |
Latest revision as of 07:09, 20 September 2015
Short description: | p19@JUP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_JUP_5end |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | -426bp_to_ENST00000420370_5end |
EntrezGene: | JUP |
HGNC: | 6207 |
UniProt: | C9J826 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
liver | 3.46e-24 | 19 |
digestive gland | 3.46e-24 | 19 |
liver bud | 3.46e-24 | 19 |
hepatic diverticulum | 4.90e-21 | 22 |
liver primordium | 4.90e-21 | 22 |
digestive tract diverticulum | 3.62e-20 | 23 |
epithelial sac | 1.23e-18 | 25 |
epithelium of foregut-midgut junction | 1.23e-18 | 25 |
anatomical boundary | 1.23e-18 | 25 |
hepatobiliary system | 1.23e-18 | 25 |
foregut-midgut junction | 1.23e-18 | 25 |
septum transversum | 1.23e-18 | 25 |
sac | 5.83e-18 | 26 |
exocrine gland | 3.16e-15 | 31 |
exocrine system | 3.16e-15 | 31 |
endocrine gland | 1.35e-13 | 35 |
endocrine system | 8.78e-11 | 45 |
gut epithelium | 3.93e-09 | 54 |
abdomen element | 3.93e-09 | 54 |
abdominal segment element | 3.93e-09 | 54 |
gland | 1.98e-08 | 59 |
abdominal segment of trunk | 2.64e-08 | 60 |
abdomen | 2.64e-08 | 60 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 4.32e-26 | 2 |