FFCP PHASE1:Hg19::chr5:133340172..133340218,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7416 | |EntrezGene=7416 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12669 | |HGNC=12669 | ||
|TSSclassifier=strong | |||
|UniProt=C9JI87 | |UniProt=C9JI87 | ||
|association_with_transcript=107bp_to_ENST00000425992_5end | |association_with_transcript=107bp_to_ENST00000425992_5end | ||
|cluster_id=chr5:133340172..133340218,- | |||
|description=CAGE_peak_6_at_VDAC1_5end | |description=CAGE_peak_6_at_VDAC1_5end | ||
|id=chr5:133340172..133340218,- | |id=chr5:133340172..133340218,- | ||
|ontology_enrichment_celltype=CL:0000055!4.99e-16!180;CL:0000057!6.16e-13!75;CL:0000034!7.36e-13!444;CL:0000048!2.05e-12!430;CL:0000723!7.93e-12!436;CL:0000680!5.09e-09!57;CL:0000056!5.09e-09!57;CL:0000355!5.09e-09!57;CL:0002334!1.43e-08!12;CL:0002494!3.28e-08!16;CL:0000187!6.49e-08!54;CL:0002320!7.24e-08!365;CL:0002371!3.20e-07!591;CL:0000144!3.89e-07!625;CL:0000183!7.15e-07!59;CL:0000134!7.39e-07!358 | |ontology_enrichment_celltype=CL:0000055!4.99e-16!180;CL:0000057!6.16e-13!75;CL:0000034!7.36e-13!444;CL:0000048!2.05e-12!430;CL:0000723!7.93e-12!436;CL:0000680!5.09e-09!57;CL:0000056!5.09e-09!57;CL:0000355!5.09e-09!57;CL:0002334!1.43e-08!12;CL:0002494!3.28e-08!16;CL:0000187!6.49e-08!54;CL:0002320!7.24e-08!365;CL:0002371!3.20e-07!591;CL:0000144!3.89e-07!625;CL:0000183!7.15e-07!59;CL:0000134!7.39e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0002494;5.43e-16;16!CL:0002334;7.54e-15;12!CL:0002582;6.25e-08;3 | |ontology_enrichment_celltype_v019=CL:0002494;5.43e-16;16!CL:0002334;7.54e-15;12!CL:0002582;6.25e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002494,5.81e-16,16;CL:0002334,2.54e-15,12;CL:0000034,4.25e-14,441;CL:0000048,1.48e-13,427;CL:0000723,3.97e-13,433;CL:0002320,1.15e-10,361;CL:0000057,1.43e-10,76;CL:0000134,1.62e-10,354;CL:0000219,2.44e-08,386;CL:0002582,2.82e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!3.28e-09!83;UBERON:0002329!3.28e-09!83;UBERON:0003077!3.28e-09!83;UBERON:0003059!3.28e-09!83;UBERON:0007282!3.28e-09!83;UBERON:0009618!3.28e-09!83;UBERON:0007285!3.28e-09!83;UBERON:0002384!1.94e-08!375;UBERON:0004290!1.99e-08!70;UBERON:0001134!4.45e-08!61;UBERON:0002036!4.45e-08!61;UBERON:0003082!4.45e-08!61;UBERON:0000486!1.00e-07!82;UBERON:0002385!1.20e-07!63;UBERON:0001015!1.20e-07!63;UBERON:0000383!1.20e-07!63;UBERON:0000948!3.56e-07!24;UBERON:0005498!3.56e-07!24;UBERON:0004140!3.56e-07!24;UBERON:0009881!3.56e-07!24;UBERON:0004141!3.56e-07!24;UBERON:0003084!3.56e-07!24;UBERON:0007005!3.56e-07!24;UBERON:0004139!3.56e-07!24;UBERON:0004291!3.56e-07!24 | |ontology_enrichment_uberon=UBERON:0000914!3.28e-09!83;UBERON:0002329!3.28e-09!83;UBERON:0003077!3.28e-09!83;UBERON:0003059!3.28e-09!83;UBERON:0007282!3.28e-09!83;UBERON:0009618!3.28e-09!83;UBERON:0007285!3.28e-09!83;UBERON:0002384!1.94e-08!375;UBERON:0004290!1.99e-08!70;UBERON:0001134!4.45e-08!61;UBERON:0002036!4.45e-08!61;UBERON:0003082!4.45e-08!61;UBERON:0000486!1.00e-07!82;UBERON:0002385!1.20e-07!63;UBERON:0001015!1.20e-07!63;UBERON:0000383!1.20e-07!63;UBERON:0000948!3.56e-07!24;UBERON:0005498!3.56e-07!24;UBERON:0004140!3.56e-07!24;UBERON:0009881!3.56e-07!24;UBERON:0004141!3.56e-07!24;UBERON:0003084!3.56e-07!24;UBERON:0007005!3.56e-07!24;UBERON:0004139!3.56e-07!24;UBERON:0004291!3.56e-07!24 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;6.09e-11;22!UBERON:0007100;2.45e-09;25!UBERON:0002072;2.38e-08;5!UBERON:0003688;7.67e-07;6!UBERON:0002358;7.67e-07;6!UBERON:0003684;7.67e-07;6!UBERON:0001178;7.67e-07;6 | |ontology_enrichment_uberon_v019=UBERON:0000948;6.09e-11;22!UBERON:0007100;2.45e-09;25!UBERON:0002072;2.38e-08;5!UBERON:0003688;7.67e-07;6!UBERON:0002358;7.67e-07;6!UBERON:0003684;7.67e-07;6!UBERON:0001178;7.67e-07;6 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000948,3.75e-14,24;UBERON:0005498,3.75e-14,24;UBERON:0004140,3.75e-14,24;UBERON:0009881,3.75e-14,24;UBERON:0004141,3.75e-14,24;UBERON:0003084,3.75e-14,24;UBERON:0007005,3.75e-14,24;UBERON:0004139,3.75e-14,24;UBERON:0004291,3.75e-14,24;UBERON:0007100,3.17e-12,27;UBERON:0002384,5.85e-12,371;UBERON:0003498,1.52e-08,5;UBERON:0005985,1.52e-08,5;UBERON:0002072,3.89e-08,5;UBERON:0003688,9.51e-07,6;UBERON:0002358,9.51e-07,6;UBERON:0003684,9.51e-07,6;UBERON:0001178,9.51e-07,6 | |||
|phase1_expression=1.09007027562334,2.35510576280081,0.986680828671798,2.00146596706261,2.23480547213644,0,0,5.05375898741465,1.04474251279935,0.491467873003018,0,0.218441372130172,0.263766978228454,0.618831764800233,0.662794751455832,0,0,2.19093027116212,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0.136874425072884,0.251085279189606,0.229240217243854,0.410502947249729,0.157421562627358,0,0,0.154816123316076,0,0,0,1.08454080812422,0.284338464974843,0.587200878669695,0,0.200544447470142,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209658645508376,0,0,0,0.285012743741249,0,0.182664153764634,0,0,0.889509253863555,0,0,0,0,0,0.569212969109448,0.587237189370939,1.14681968437569,5.28685314316103,1.68152568894461,0.790152254325231,0,0,1.23360899399706,0,0.32592226663359,0.473447805734733,0,0,0.294605907474837,0,0,0,0,0.164437904603676,0,0,0.14828656316206,0,0,0.226618685395132,0,0.68725489096526,0,0,0,0,0,0,0,0,0,1.20964045934839,1.06976078313403,1.01377082717959,2.43806866313962,0.670700859703636,1.2786256184353,1.0843174571537,0.50133791063589,0,0.795285947051099,0.973269740605272,0.283604451492204,0.443458794925128,0.263504357079378,0.0654895377488563,0,0.370784442784429,0,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0.33472061276467,0.402829317109147,0,0,0,0,0.17859945656816,0,0,0,0,0,0,0,0.436094052142534,2.48485975847659,1.64619665163954,1.72131935057184,0.573673241497627,1.06400514659507,1.68203280042692,1.06748995729705,1.2333377420858,0.311211035399766,0.538842688278752,2.12500474047496,0.454072282934794,1.15235184896,0,1.24864030732128,1.1409436430889,1.49448680551801,0.23486899728753,0.161872944368132,0,0.408308342509787,0.122834317311768,0.516628905878827,1.18800285728205,0.247266929278557,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0.877955241761676,0,0.45071417671979,1.47461838108027,0,0.85422955527427,0.847727604638247,0,0.824420233907511,0.257640540045629,0.744467425326359,0.337552664482532,0.974370051611986,0.504867548488229,0.460249493211497,0.484938170456436,0,0.403008392910561,0.169560592310488,0,0,0,0.121973706129595,0.132529768321485,0,0.207322110030741,0.252320850875628,0,0,0.643240938192885,0,1.85747171212792,1.44375896333917,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0.368965315629341,0.686271241194102,0.329250856225877,0,0,0.185176890317059,0.325808305310325,0,0,0,0.352226082707465,0,0,0.190254152234598,0,0,0.246217006087397,0.702012795417713,0,0,0.335964256397719,0,0.0895585227028483,0,0,0.492663237895943,0.088048434013226,0.207328115540772,0,0.12624243342638,0.126995788584338,0,0,0,0,0,0,0.112131084345361,0,0.07333828582095,0.775630294546667,0,0,0,0,0,0,0,0.57191197463259,1.62786481617433,0,0,1.06617584622764,0.791951872933429,0.301439377059586,0,0.299918973546171,0,0,0,0.718874566474748,0,0,2.17171960001369,0.410952645100767,1.43248770591916,0.224170287987055,0.788123040807709,0.646882724578552,0.641715181398742,0,0,0,0,0,0,0,0.828831026872071,0.24538298343828,1.50051156317903,0.542530047399471,0.623912584592421,0.356857977594324,0.157702415033935,0.117141414992713,2.10662269809403,2.27407504055985,0,0.664225598535437,1.10621501125022,0.521301686808497,0.195801157462741,0.343143423810856,0.206768026122887,0.215714200818617,0.74709290462411,0,0,0.604780586659361,0.992431231275107,0.61384789315225,1.68396056659844,0.768834895534206,1.02341449813341,1.76939313257968,2.96836132889982,1.3878872442239,2.13074070375753,1.8067974323038,1.55776328755086,2.09178681227927,0,0.200506470303285,0,0.229628896329213,1.0925470080403,0.393373244878272,0,0.0770153371044148,0,0,0,0,0,0.431831832204279,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0,0,0,0,0.193341436584244,0.462145851343933,0.460511024178389,0.413509717453592,0.429680979473094,0.725083469571143,0.681813019328807,0.623224249527161,0.165284915360978,0,0,0,0.929691098594572,0,0,0,1.06461206063404,0.869932992075073,0.37064843820784,0.715624433709956,0.372158369359667,0.632758849437452,0.571890581771475,0.255897791311334,0.42793898803392,0.636406495851874,0.78494864019923,0.539617372749944,0.274537029736055,1.06031162111118,1.41527737101321,3.17020642346017,0,0.48763373908959,0.243713489631284,0,0.545999645631943,0.424216295861138,3.39024349860728,0.551365343546124,1.32687795048244,1.31535265576129,0.578775534266688,0,0.202910376962704,0.30982349809975,0,0.143411352204052,0.589494246078727,0,0.354761064070598,0.633322905892992,0.329294892959902,0,0,0,0,0,0.188287601553558,0.43050537267123,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0.962479855263359,0,0.743212700502875,2.74111504655245,0,0.637705090915289,0,0,0,0.324621940274555,0.280797178113459,4.56469358066384,0,0,1.01575066680962,0.481764225311099,0,0.851692475380653,0,0,0.223676107892416,0.500547425135725,0,0.835218521685727,0,0,0.99921590399346,0,0,0.586032717087576,0.1213605217495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| ||
|short_description=p6@VDAC1 | |short_description=p6@VDAC1 | ||
}} | }} |
Latest revision as of 07:24, 20 September 2015
Short description: | p6@VDAC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_VDAC1_5end |
Coexpression cluster: | NA |
Association with transcript: | 107bp_to_ENST00000425992_5end |
EntrezGene: | VDAC1 |
HGNC: | 12669 |
UniProt: | C9JI87 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 5.81e-16 | 16 |
preadipocyte | 2.54e-15 | 12 |
stem cell | 4.25e-14 | 441 |
multi fate stem cell | 1.48e-13 | 427 |
somatic stem cell | 3.97e-13 | 433 |
connective tissue cell | 1.15e-10 | 361 |
fibroblast | 1.43e-10 | 76 |
mesenchymal cell | 1.62e-10 | 354 |
motile cell | 2.44e-08 | 386 |
visceral preadipocyte | 2.82e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
heart | 3.75e-14 | 24 |
primitive heart tube | 3.75e-14 | 24 |
primary heart field | 3.75e-14 | 24 |
anterior lateral plate mesoderm | 3.75e-14 | 24 |
heart tube | 3.75e-14 | 24 |
heart primordium | 3.75e-14 | 24 |
cardiac mesoderm | 3.75e-14 | 24 |
cardiogenic plate | 3.75e-14 | 24 |
heart rudiment | 3.75e-14 | 24 |
primary circulatory organ | 3.17e-12 | 27 |
connective tissue | 5.85e-12 | 371 |
heart blood vessel | 1.52e-08 | 5 |
coronary vessel | 1.52e-08 | 5 |
hypodermis | 3.89e-08 | 5 |
omentum | 9.51e-07 | 6 |
peritoneum | 9.51e-07 | 6 |
abdominal cavity | 9.51e-07 | 6 |
visceral peritoneum | 9.51e-07 | 6 |