FFCP PHASE1:Hg19::chr20:1874752..1874786,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=140885 | |EntrezGene=140885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9662 | |HGNC=9662 | ||
|TSSclassifier=strong | |||
|UniProt=B2R6C3,P78324 | |UniProt=B2R6C3,P78324 | ||
|association_with_transcript=-26bp_to_NM_001040022,uc002wfq.2,uc010zps.1_5end | |association_with_transcript=-26bp_to_NM_001040022,uc002wfq.2,uc010zps.1_5end | ||
|cluster_id=chr20:1874752..1874786,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_SIRPA_5end | |description=CAGE_peak_3_at_SIRPA_5end | ||
|id=chr20:1874752..1874786,+ | |id=chr20:1874752..1874786,+ | ||
|ontology_enrichment_celltype=CL:0000766!5.93e-27!76;CL:0002009!4.49e-25!65;CL:0000763!7.16e-25!112;CL:0000049!7.16e-25!112;CL:0000557!2.23e-24!71;CL:0002194!3.55e-24!63;CL:0000576!3.55e-24!63;CL:0000040!3.55e-24!63;CL:0000559!3.55e-24!63;CL:0002057!1.24e-21!42;CL:0000839!2.55e-21!70;CL:0000860!3.66e-18!45;CL:0000037!5.03e-09!172;CL:0000566!5.03e-09!172;CL:0002032!5.96e-09!165;CL:0000837!5.96e-09!165;CL:0000738!9.31e-09!140;CL:0000988!6.06e-08!182 | |ontology_enrichment_celltype=CL:0000766!5.93e-27!76;CL:0002009!4.49e-25!65;CL:0000763!7.16e-25!112;CL:0000049!7.16e-25!112;CL:0000557!2.23e-24!71;CL:0002194!3.55e-24!63;CL:0000576!3.55e-24!63;CL:0000040!3.55e-24!63;CL:0000559!3.55e-24!63;CL:0002057!1.24e-21!42;CL:0000839!2.55e-21!70;CL:0000860!3.66e-18!45;CL:0000037!5.03e-09!172;CL:0000566!5.03e-09!172;CL:0002032!5.96e-09!165;CL:0000837!5.96e-09!165;CL:0000738!9.31e-09!140;CL:0000988!6.06e-08!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.84e-21;33!CL:0002057;3.84e-21;33!CL:0000473;3.93e-21;39!CL:0000234;3.93e-21;39!CL:0000576;1.96e-18;48!CL:0000766;1.33e-14;69!CL:0000763;1.25e-10;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.29e-34,72;CL:0000763,4.00e-34,108;CL:0000049,4.00e-34,108;CL:0002009,1.24e-32,61;CL:0002194,1.45e-31,59;CL:0000576,1.45e-31,59;CL:0000040,1.45e-31,59;CL:0000559,1.45e-31,59;CL:0000557,2.88e-31,67;CL:0000473,3.67e-29,48;CL:0000234,3.67e-29,48;CL:0000839,5.19e-28,66;CL:0000860,3.87e-25,42;CL:0002057,3.87e-25,42;CL:0000037,1.36e-15,168;CL:0002032,1.96e-15,161;CL:0000837,1.96e-15,161;CL:0000988,2.79e-14,177;CL:0000738,7.01e-14,136;CL:0002087,2.70e-10,115;CL:0002031,2.40e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-18;42!CL:0000049;4.66e-10;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.70e-23!102;UBERON:0003061!5.70e-23!102;UBERON:0002193!1.42e-22!112;UBERON:0007023!2.20e-22!115;UBERON:0002371!2.56e-21!80;UBERON:0001474!5.35e-18!86;UBERON:0004765!1.78e-17!101;UBERON:0001434!1.78e-17!101;UBERON:0001049!2.69e-15!57;UBERON:0005068!2.69e-15!57;UBERON:0006241!2.69e-15!57;UBERON:0007135!2.69e-15!57;UBERON:0003081!2.83e-15!216;UBERON:0003080!3.01e-15!42;UBERON:0002405!3.45e-15!115;UBERON:0002780!4.37e-15!41;UBERON:0001890!4.37e-15!41;UBERON:0006240!4.37e-15!41;UBERON:0001893!2.27e-14!34;UBERON:0002020!7.45e-14!34;UBERON:0003528!7.45e-14!34;UBERON:0002791!9.40e-14!33;UBERON:0001869!1.12e-13!32;UBERON:0002616!2.51e-12!59;UBERON:0002619!2.80e-12!22;UBERON:0001950!4.52e-11!20;UBERON:0000955!7.28e-11!69;UBERON:0006238!7.28e-11!69;UBERON:0002204!1.73e-10!167;UBERON:0000956!7.16e-10!25;UBERON:0000203!7.16e-10!25;UBERON:0002346!1.03e-09!90;UBERON:0003075!2.13e-09!86;UBERON:0007284!2.13e-09!86;UBERON:0001017!8.72e-09!82;UBERON:0005743!3.90e-08!86;UBERON:0000479!7.38e-08!787;UBERON:0003056!1.44e-07!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.44e-14;34!UBERON:0001869;2.90e-14;32!UBERON:0002619;3.79e-14;22!UBERON:0002791;5.09e-14;32!UBERON:0003528;1.37e-13;34!UBERON:0002020;1.37e-13;34!UBERON:0002780;8.98e-13;41!UBERON:0001890;8.98e-13;41!UBERON:0001950;1.01e-12;20!UBERON:0000956;3.09e-11;25!UBERON:0000203;3.09e-11;25!UBERON:0000073;2.18e-09;53!UBERON:0002616;2.18e-09;53!UBERON:0002420;1.84e-07;9!UBERON:0007245;1.84e-07;9!UBERON:0010009;1.84e-07;9!UBERON:0010011;1.84e-07;9!UBERON:0000454;1.84e-07;9 | |||
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|phase1_expression=1.09007027562334,1.71280419112787,3.80576891059122,0,2.23480547213644,0.872338524100369,0,0,0.261185628199839,0.737201809504527,0,0,1.05506791291381,0.866364470720326,0.331397375727916,0.672325146451775,3.01347264011988,2.92124036154949,0.975865597581014,0.246242116153576,0.408001382488506,0.626909442956176,0,0.136874425072884,0.376627918784408,1.52826811495903,1.72411237844886,0.865818594450472,3.93364276848904,1.53531759238885,8.05043841243595,4.59710612239464,1.50602959389125,0,0,0,2.93600439334847,4.9859586767869,12.0326668482085,3.90619567288533,9.62836539231675,20.7291946252147,24.2121033576135,18.1747798474456,12.0920301980419,13.5847074265177,37.1886459049095,23.0254017292222,31.2803434604055,33.9477022940138,20.2366958157989,17.7361672416439,28.6138915011393,18.719055823931,32.502356782642,24.0950194614534,14.7369321031237,20.2251136000576,31.8327248065739,20.8603867599461,30.688182038354,12.5343494070952,9.17532825059507,13.6391920170462,44.9824319874305,36.8800396049241,59.1681136545796,26.6323585172148,11.9941071236646,14.1172749058326,38.7455681685356,27.6208226990674,39.5577984301106,3.59133986730301,3.82687739937078,3.98351426465914,15.9506656228023,10.6625593917469,14.6260283894343,2.28010194992999,1.79025009479181,1.0959849225878,0,1.09227722252426,0,1.70692089026603,0.800791974072025,1.14950487990897,1.32208974556972,0,0,0,0,1.32171328579026,0.560508562981536,3.95076127162616,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.602300476311091,0.127986611154418,1.24930726552346,0.710331756132051,0,0,0,0,0,1.34140171940727,0.767175371061182,0.722878304769133,0,2.17269778441236,0.795285947051099,3.89307896242109,0.378139268656271,0,0.087834785693126,9.49598297358417,1.09288586487763,0,20.446485800245,14.975157407737,7.04677190749985,0.715471872916026,0,0.371457501329565,1.19257444420023,0.860234595106124,2.08284300964557,0,0.838998872419812,0.275118041940067,1.25396979922086,0,0.35576626268671,0.33472061276467,4.02829317109147,3.04108842287405,4.88124115096339,1.47065232138347,1.62028389576352,0.714397826272638,0.22452937262617,1.23872628531654,1.53316637465883,1.89853131913626,0.549605231791222,19.7670626154095,46.533631697799,1.3082821564276,0.496971951695318,0.379891534993739,0.926864265692532,0.573673241497627,1.77334191099179,2.24271040056923,3.20246987189115,0.74000264525148,0.311211035399766,0.269421344139376,0.163461903113459,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0,1.18800285728205,1.7308685049499,0.910161361938026,0.718618141816238,0.505008341862199,0.250237039743928,0,0.877955241761676,1.22595118319608,1.80285670687916,0.226864366320042,1.79389635688862,1.06778694409284,2.54318281391474,3.60109315301283,1.64884046781502,1.54584324027377,1.30281799432113,2.02531598689519,3.70260619612555,2.01947019395292,2.11714766877288,1.77810662500693,2.84007674013291,1.71278566986988,1.86516651541536,1.15956511897978,1.36373060295417,0,0.243947412259191,0,0.348581828608555,0.310983165046111,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,2.80483547606892,0.4115740113314,0,0,0.982827216677626,0,0,0,0,1.20725313949488,0,0.502644862058154,1.66659201285353,0.651616610620649,0,0,0.115930404975077,0.117408694235822,3.03169540298255,1.85194205030644,4.56609965363036,0,0,8.12516120088411,32.9946013846325,32.252962216654,3.74935335947108,1.34385702559088,1.55952606966625,0.806026704325635,0,0.383382679165211,0,0.792435906119034,1.86595303986695,1.8735593944205,1.51490920111656,1.96843472305724,6.11181480893244,5.86087236050235,11.9750712215894,1.33675740514321,3.90445975197093,3.14409075893636,0,0,0.1466765716419,0.646358578788889,0,1.690605505112,0.531876233169741,0,0.771622122786426,0,0,0.714889968290738,0.542621605391443,0,0.325736184293735,0.710783897485092,0,3.61727252471503,3.48613383440118,3.499054691372,27.9734695474738,13.5609414686674,31.6250909224547,2.15662369942424,0,0,2.31650090668127,1.2328579353023,1.43248770591916,0,1.18218456121156,0,0.641715181398742,0.254094624222463,0,0,0.837581326671744,0,26.9642528620986,35.899375104483,29.8379169673946,0.36807447515742,1.00034104211935,0.271265023699736,0.831883446123229,0.535286966391485,0.315404830067869,0.937131319941706,1.20378439891088,0,0,0.664225598535437,1.47495334833363,1.04260337361699,0.195801157462741,0.343143423810856,2.89475236572042,2.80428461064202,4.90946765895844,0,0,1.20956117331872,4.21783273291921,3.06923946576125,6.45518217196069,3.20347873139252,1.53512174720011,5.62988724002626,1.48418066444991,0.925258162815933,0.887808626565635,0.410635780069046,1.55776328755086,1.04589340613963,0.120859449591622,5.81468763879526,0.736647911487171,0.34444334449382,0.364182336013434,0.393373244878272,0.902399225814824,0.924184045252977,2.35304930753057,4.38417673959782,1.79437769117889,0,0.680374821106063,1.0795795805107,0,1.08378575017541,3.01013864312912,2.29388645740534,1.662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| ||
|short_description=p3@SIRPA | |short_description=p3@SIRPA | ||
}} | }} |
Latest revision as of 07:38, 20 September 2015
Short description: | p3@SIRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SIRPA_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -26bp_to_NM_001040022, uc002wfq.2, uc010zps.1_5end |
EntrezGene: | SIRPA |
HGNC: | 9662 |
UniProt: | B2R6C3P78324 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.29e-34 | 72 |
myeloid cell | 4.00e-34 | 108 |
common myeloid progenitor | 4.00e-34 | 108 |
macrophage dendritic cell progenitor | 1.24e-32 | 61 |
monopoietic cell | 1.45e-31 | 59 |
monocyte | 1.45e-31 | 59 |
monoblast | 1.45e-31 | 59 |
promonocyte | 1.45e-31 | 59 |
granulocyte monocyte progenitor cell | 2.88e-31 | 67 |
defensive cell | 3.67e-29 | 48 |
phagocyte | 3.67e-29 | 48 |
myeloid lineage restricted progenitor cell | 5.19e-28 | 66 |
classical monocyte | 3.87e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.87e-25 | 42 |
hematopoietic stem cell | 1.36e-15 | 168 |
hematopoietic oligopotent progenitor cell | 1.96e-15 | 161 |
hematopoietic multipotent progenitor cell | 1.96e-15 | 161 |
hematopoietic cell | 2.79e-14 | 177 |
leukocyte | 7.01e-14 | 136 |
nongranular leukocyte | 2.70e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 2.40e-09 | 120 |