FFCP PHASE1:Hg19::chr12:7053228..7053260,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113246 | |EntrezGene=113246 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29521 | |HGNC=29521 | ||
|TSSclassifier=strong | |||
|UniProt=Q99622 | |UniProt=Q99622 | ||
|association_with_transcript=25bp_to_NM_138425,uc001qrz.2_5end | |association_with_transcript=25bp_to_NM_138425,uc001qrz.2_5end | ||
|cluster_id=chr12:7053228..7053260,+ | |||
|description=CAGE_peak_2_at_C12orf57_5end | |description=CAGE_peak_2_at_C12orf57_5end | ||
|id=chr12:7053228..7053260,+ | |id=chr12:7053228..7053260,+ | ||
|ontology_enrichment_celltype=CL:0000222!7.19e-16!119;CL:0000393!9.77e-16!60;CL:0000211!9.77e-16!60;CL:0000183!3.15e-14!59;CL:0000187!7.48e-14!54;CL:0000680!1.94e-13!57;CL:0000056!1.94e-13!57;CL:0000355!1.94e-13!57;CL:0000055!1.11e-12!180;CL:0000192!2.88e-12!42;CL:0000514!2.88e-12!42;CL:0000359!3.00e-12!32;CL:0002321!1.91e-08!248;CL:0000220!3.21e-08!246 | |ontology_enrichment_celltype=CL:0000222!7.19e-16!119;CL:0000393!9.77e-16!60;CL:0000211!9.77e-16!60;CL:0000183!3.15e-14!59;CL:0000187!7.48e-14!54;CL:0000680!1.94e-13!57;CL:0000056!1.94e-13!57;CL:0000355!1.94e-13!57;CL:0000055!1.11e-12!180;CL:0000192!2.88e-12!42;CL:0000514!2.88e-12!42;CL:0000359!3.00e-12!32;CL:0002321!1.91e-08!248;CL:0000220!3.21e-08!246 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.09e-11;32!CL:0000192;1.03e-08;43!CL:0000393;4.46e-08;61!CL:0000211;4.46e-08;61!CL:0000187;6.51e-08;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.08e-16,121;CL:0000393,2.47e-15,61;CL:0000211,2.47e-15,61;CL:0000187,1.84e-13,55;CL:0000680,4.52e-13,58;CL:0000056,4.52e-13,58;CL:0000355,4.52e-13,58;CL:0000359,3.00e-12,32;CL:0000192,7.70e-12,43;CL:0000514,7.70e-12,43;CL:0002321,1.68e-08,250 | |||
|ontology_enrichment_development_v019=CL:0000514;1.03e-08;43!CL:0000355;2.78e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004872!2.27e-19!84;UBERON:0001981!3.23e-16!60;UBERON:0007500!3.23e-16!60;UBERON:0004537!3.23e-16!60;UBERON:0006965!3.23e-16!60;UBERON:0002049!5.79e-16!79;UBERON:0007798!5.79e-16!79;UBERON:0000055!1.13e-15!69;UBERON:0001637!6.99e-15!42;UBERON:0003509!6.99e-15!42;UBERON:0004572!6.99e-15!42;UBERON:0003914!1.11e-14!118;UBERON:0001134!3.36e-13!61;UBERON:0002036!3.36e-13!61;UBERON:0003082!3.36e-13!61;UBERON:0001009!1.19e-12!113;UBERON:0004535!1.96e-12!110;UBERON:0002385!4.63e-12!63;UBERON:0001015!4.63e-12!63;UBERON:0000383!4.63e-12!63;UBERON:0004573!1.10e-11!33;UBERON:0004571!1.10e-11!33;UBERON:0004290!2.00e-11!70;UBERON:0000477!5.79e-11!286;UBERON:0000914!1.59e-10!83;UBERON:0002329!1.59e-10!83;UBERON:0003077!1.59e-10!83;UBERON:0003059!1.59e-10!83;UBERON:0007282!1.59e-10!83;UBERON:0009618!1.59e-10!83;UBERON:0007285!1.59e-10!83;UBERON:0003104!1.89e-10!238;UBERON:0009142!1.89e-10!238;UBERON:0000486!2.12e-10!82;UBERON:0000490!3.95e-10!138;UBERON:0002100!8.15e-10!216;UBERON:0005256!6.78e-09!143;UBERON:0000025!1.63e-08!194;UBERON:0004111!3.37e-08!241;UBERON:0000948!7.18e-08!24;UBERON:0005498!7.18e-08!24;UBERON:0004140!7.18e-08!24;UBERON:0009881!7.18e-08!24;UBERON:0004141!7.18e-08!24;UBERON:0003084!7.18e-08!24;UBERON:0007005!7.18e-08!24;UBERON:0004139!7.18e-08!24;UBERON:0004291!7.18e-08!24;UBERON:0007100!7.21e-08!27;UBERON:0000481!2.36e-07!347;UBERON:0000483!8.28e-07!309;UBERON:0000119!8.68e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.18e-10;42!UBERON:0003509;1.18e-10;42!UBERON:0004572;1.18e-10;42!UBERON:0004573;1.22e-10;33!UBERON:0004571;1.22e-10;33!UBERON:0007500;3.83e-08;56!UBERON:0001981;3.83e-08;56!UBERON:0004537;3.83e-08;56!UBERON:0000948;4.08e-07;22!UBERON:0007100;4.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004872,2.93e-19,83;UBERON:0007500,3.99e-16,59;UBERON:0001981,3.99e-16,59;UBERON:0004537,3.99e-16,59;UBERON:0006965,3.99e-16,59;UBERON:0002049,7.51e-16,78;UBERON:0007798,7.51e-16,78;UBERON:0000055,1.44e-15,68;UBERON:0003914,6.49e-15,117;UBERON:0001637,6.98e-15,42;UBERON:0003509,6.98e-15,42;UBERON:0004572,6.98e-15,42;UBERON:0001134,7.39e-13,62;UBERON:0002036,7.39e-13,62;UBERON:0003082,7.39e-13,62;UBERON:0007503,1.57e-12,78;UBERON:0001009,1.58e-12,112;UBERON:0004535,2.61e-12,109;UBERON:0002385,9.45e-12,64;UBERON:0001015,9.45e-12,64;UBERON:0000383,9.45e-12,64;UBERON:0004573,1.10e-11,33;UBERON:0004571,1.10e-11,33;UBERON:0007524,2.83e-11,73;UBERON:0002329,3.75e-11,71;UBERON:0003059,3.75e-11,71;UBERON:0007282,3.75e-11,71;UBERON:0004290,3.75e-11,71;UBERON:0009618,3.75e-11,71;UBERON:0003104,4.03e-11,160;UBERON:0009142,4.03e-11,160;UBERON:0003077,6.90e-11,72;UBERON:0007285,6.90e-11,72;UBERON:0005256,1.16e-10,122;UBERON:0000486,3.56e-10,83;UBERON:0002100,1.34e-09,199;UBERON:0000490,2.66e-09,148;UBERON:0000025,1.79e-08,192;UBERON:0004111,2.14e-08,240;UBERON:0000948,7.18e-08,24;UBERON:0005498,7.18e-08,24;UBERON:0004140,7.18e-08,24;UBERON:0009881,7.18e-08,24;UBERON:0004141,7.18e-08,24;UBERON:0003084,7.18e-08,24;UBERON:0007005,7.18e-08,24;UBERON:0004139,7.18e-08,24;UBERON:0004291,7.18e-08,24;UBERON:0007100,7.21e-08,27;UBERON:0003103,8.22e-07,68;UBERON:0000483,9.44e-07,306;UBERON:0000119,9.90e-07,309 | |||
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| ||
|short_description=p2@C12orf57 | |short_description=p2@C12orf57 | ||
}} | }} |
Latest revision as of 07:58, 20 September 2015
Short description: | p2@C12orf57 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_C12orf57_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_NM_138425, uc001qrz.2_5end |
EntrezGene: | C12orf57 |
HGNC: | 29521 |
UniProt: | Q99622 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.08e-16 | 121 |
electrically responsive cell | 2.47e-15 | 61 |
electrically active cell | 2.47e-15 | 61 |
muscle cell | 1.84e-13 | 55 |
muscle precursor cell | 4.52e-13 | 58 |
myoblast | 4.52e-13 | 58 |
multi-potent skeletal muscle stem cell | 4.52e-13 | 58 |
vascular associated smooth muscle cell | 3.00e-12 | 32 |
smooth muscle cell | 7.70e-12 | 43 |
smooth muscle myoblast | 7.70e-12 | 43 |
embryonic cell | 1.68e-08 | 250 |