FFCP PHASE1:Hg19::chr19:5903739..5903809,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:5903739..5903809,-
|short_description=p1@FUT5,p1@NDUFA11
|description=CAGE_peak_1_at_FUT5_5end,CAGE_peak_1_at_NDUFA11_5end
|association_with_transcript=0b...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2527,126328 | |EntrezGene=2527,126328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4016,20371 | |HGNC=4016,20371 | ||
|TSSclassifier=strong | |||
|UniProt=Q11128,C9JT23 | |UniProt=Q11128,C9JT23 | ||
|association_with_transcript=0bp_to_ENST00000252675,ENST00000418389_5end | |||
|cluster_id=chr19:5903739..5903809,- | |||
|coexpression_cluster_id=C2143 | |||
|description=CAGE_peak_1_at_FUT5_5end,CAGE_peak_1_at_NDUFA11_5end | |||
|id=chr19:5903739..5903809,- | |||
|ontology_enrichment_celltype=CL:0000222!3.25e-22!119;CL:0000055!2.94e-18!180;CL:0000220!8.05e-18!246;CL:0000183!9.85e-18!59;CL:0002321!1.00e-17!248;CL:0000187!3.24e-15!54;CL:0000393!4.92e-15!60;CL:0000211!4.92e-15!60;CL:0000192!1.15e-14!42;CL:0000514!1.15e-14!42;CL:0000680!1.37e-14!57;CL:0000056!1.37e-14!57;CL:0000355!1.37e-14!57;CL:0000359!8.11e-12!32;CL:0000144!1.04e-10!625;CL:0002371!1.64e-09!591;CL:0000213!1.51e-08!57;CL:0000215!1.51e-08!57;CL:0000548!1.36e-07!679;CL:0000004!1.36e-07!679;CL:0000255!1.36e-07!679;CL:0000012!2.23e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000359;3.87e-11;32!CL:0000192;9.26e-11;43!CL:0000187;1.34e-08;55!CL:0000393;7.40e-08;61!CL:0000211;7.40e-08;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.37e-23,121;CL:0002321,3.07e-18,250;CL:0000187,2.39e-15,55;CL:0000393,3.57e-15,61;CL:0000211,3.57e-15,61;CL:0000192,8.93e-15,43;CL:0000514,8.93e-15,43;CL:0000680,9.98e-15,58;CL:0000056,9.98e-15,58;CL:0000355,9.98e-15,58;CL:0000359,8.11e-12,32;CL:0000213,6.75e-09,58;CL:0000215,6.75e-09,58 | |||
|ontology_enrichment_development_v019=CL:0000514;9.26e-11;43!CL:0000355;6.49e-08;58!CL:0000222;5.16e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!6.45e-19!70;UBERON:0000914!9.77e-19!83;UBERON:0002329!9.77e-19!83;UBERON:0003077!9.77e-19!83;UBERON:0003059!9.77e-19!83;UBERON:0007282!9.77e-19!83;UBERON:0009618!9.77e-19!83;UBERON:0007285!9.77e-19!83;UBERON:0000486!1.73e-18!82;UBERON:0001134!3.90e-16!61;UBERON:0002036!3.90e-16!61;UBERON:0003082!3.90e-16!61;UBERON:0002385!5.50e-15!63;UBERON:0001015!5.50e-15!63;UBERON:0000383!5.50e-15!63;UBERON:0005256!1.06e-14!143;UBERON:0002049!4.79e-14!79;UBERON:0007798!4.79e-14!79;UBERON:0004872!6.82e-14!84;UBERON:0000055!2.00e-13!69;UBERON:0001981!4.41e-13!60;UBERON:0007500!4.41e-13!60;UBERON:0004537!4.41e-13!60;UBERON:0006965!4.41e-13!60;UBERON:0003914!1.26e-12!118;UBERON:0001637!3.97e-12!42;UBERON:0003509!3.97e-12!42;UBERON:0004572!3.97e-12!42;UBERON:0000490!1.72e-11!138;UBERON:0001009!4.94e-10!113;UBERON:0004535!3.80e-09!110;UBERON:0004573!5.01e-09!33;UBERON:0004571!5.01e-09!33;UBERON:0002100!5.93e-09!216;UBERON:0003104!1.22e-08!238;UBERON:0009142!1.22e-08!238;UBERON:0000119!7.86e-07!312;UBERON:0000483!8.74e-07!309 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.71e-08;42!UBERON:0003509;1.71e-08;42!UBERON:0004572;1.71e-08;42!UBERON:0004573;3.91e-08;33!UBERON:0004571;3.91e-08;33!UBERON:0003914;2.30e-07;74!UBERON:0007500;2.30e-07;56!UBERON:0001981;2.30e-07;56!UBERON:0004537;2.30e-07;56 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,3.41e-22,78;UBERON:0007524,3.46e-19,73;UBERON:0002329,4.67e-19,71;UBERON:0003059,4.67e-19,71;UBERON:0007282,4.67e-19,71;UBERON:0004290,4.67e-19,71;UBERON:0009618,4.67e-19,71;UBERON:0003077,9.96e-19,72;UBERON:0007285,9.96e-19,72;UBERON:0000486,1.22e-18,83;UBERON:0001134,2.84e-16,62;UBERON:0002036,2.84e-16,62;UBERON:0003082,2.84e-16,62;UBERON:0002385,3.96e-15,64;UBERON:0001015,3.96e-15,64;UBERON:0000383,3.96e-15,64;UBERON:0003104,3.75e-14,160;UBERON:0009142,3.75e-14,160;UBERON:0000490,6.39e-14,148;UBERON:0002049,8.04e-14,78;UBERON:0007798,8.04e-14,78;UBERON:0004872,1.14e-13,83;UBERON:0000055,3.36e-13,68;UBERON:0005256,4.93e-13,122;UBERON:0007500,7.38e-13,59;UBERON:0001981,7.38e-13,59;UBERON:0004537,7.38e-13,59;UBERON:0006965,7.38e-13,59;UBERON:0003914,1.79e-12,117;UBERON:0001637,3.97e-12,42;UBERON:0003509,3.97e-12,42;UBERON:0004572,3.97e-12,42;UBERON:0001009,7.73e-10,112;UBERON:0004573,5.01e-09,33;UBERON:0004571,5.01e-09,33;UBERON:0004535,5.86e-09,109;UBERON:0002100,2.62e-08,199;UBERON:0000119,6.95e-08,309;UBERON:0000483,7.74e-08,306 | |||
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| ||
|short_description=p1@FUT5,p1@NDUFA11 | |||
}} | }} |
Latest revision as of 07:59, 20 September 2015
Short description: | p1@FUT5, p1@NDUFA11 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FUT5_5end, CAGE_peak_1_at_NDUFA11_5end |
Coexpression cluster: | C2143_Mesenchymal_Alveolar_Osteoblast_Renal_Adipocyte_Placental_Fibroblast |
Association with transcript: | 0bp_to_ENST00000252675, ENST00000418389_5end |
EntrezGene: | 2527,126328 |
HGNC: | 20371&submit=Submit 4016, 20371 |
UniProt: | Q11128C9JT23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.37e-23 | 121 |
embryonic cell | 3.07e-18 | 250 |
muscle cell | 2.39e-15 | 55 |
electrically responsive cell | 3.57e-15 | 61 |
electrically active cell | 3.57e-15 | 61 |
smooth muscle cell | 8.93e-15 | 43 |
smooth muscle myoblast | 8.93e-15 | 43 |
muscle precursor cell | 9.98e-15 | 58 |
myoblast | 9.98e-15 | 58 |
multi-potent skeletal muscle stem cell | 9.98e-15 | 58 |
vascular associated smooth muscle cell | 8.11e-12 | 32 |
lining cell | 6.75e-09 | 58 |
barrier cell | 6.75e-09 | 58 |