FFCP PHASE2:Hg19::chr7:100253993..100254078,-: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:51412 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:160 |TSSclass...") |
No edit summary |
||
Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=51412 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=160 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JQT4 | ||
|association_with_transcript=0bp_to_ENST00000461605,ENST00000485601_5end | |association_with_transcript=0bp_to_ENST00000461605,ENST00000485601_5end | ||
|cluster_id=chr7:100253993..100254078,- | |cluster_id=chr7:100253993..100254078,- |
Latest revision as of 08:12, 20 September 2015
Short description: | p1@ACTL6B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACTL6B_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000461605, ENST00000485601_5end |
EntrezGene: | ACTL6B |
HGNC: | 160 |
UniProt: | C9JQT4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@ACTL6B |
---|
0
25
50
75
100
125
150
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 8.75e-93 | 89 |
neural tube | 7.85e-92 | 56 |
neural rod | 7.85e-92 | 56 |
future spinal cord | 7.85e-92 | 56 |
neural keel | 7.85e-92 | 56 |
central nervous system | 1.41e-91 | 81 |
regional part of nervous system | 2.41e-86 | 53 |
regional part of brain | 2.41e-86 | 53 |
brain | 2.71e-79 | 68 |
future brain | 2.71e-79 | 68 |
Showing 1 to 10 of 85 entries