FFCP PHASE1:Hg19::chr17:4046257..4046349,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4046257..4046349,- to FFCP PHASE1:Hg19::chr17:4046257..4046349,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23140 | |EntrezGene=23140 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29027 | |HGNC=29027 | ||
|TSSclassifier=strong | |||
|UniProt=O43149 | |UniProt=O43149 | ||
|association_with_transcript=0bp_to_ENST00000381638_5end | |||
|cluster_id=chr17:4046257..4046349,- | |||
|coexpression_cluster_id=C612 | |||
|description=CAGE_peak_1_at_ZZEF1_5end | |||
|id=chr17:4046257..4046349,- | |||
|ontology_enrichment_celltype=CL:0000738!1.79e-28!140;CL:0002031!2.90e-22!124;CL:0002087!8.72e-22!119;CL:0000766!2.02e-20!76;CL:0000037!6.61e-19!172;CL:0000566!6.61e-19!172;CL:0002057!2.10e-18!42;CL:0002032!5.30e-17!165;CL:0000837!5.30e-17!165;CL:0000557!6.44e-17!71;CL:0000988!7.61e-17!182;CL:0000839!6.42e-16!70;CL:0002009!7.79e-16!65;CL:0002194!1.89e-15!63;CL:0000576!1.89e-15!63;CL:0000040!1.89e-15!63;CL:0000559!1.89e-15!63;CL:0000860!3.73e-15!45;CL:0000763!4.02e-11!112;CL:0000049!4.02e-11!112;CL:0000791!1.02e-08!18;CL:0000789!1.02e-08!18;CL:0002420!1.02e-08!18;CL:0002419!1.02e-08!18;CL:0000790!1.02e-08!18;CL:0000838!8.54e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.04e-13;33!CL:0002057;1.04e-13;33!CL:0000473;9.57e-12;39!CL:0000234;9.57e-12;39!CL:0000576;1.12e-11;48!CL:0000766;3.54e-10;69!CL:0000791;8.81e-09;18!CL:0000789;8.81e-09;18!CL:0002419;8.81e-09;18!CL:0002087;1.74e-08;104!CL:0000738;4.59e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,8.48e-31,136;CL:0002031,2.11e-24,120;CL:0002087,5.97e-24,115;CL:0000766,3.02e-23,72;CL:0000037,1.82e-20,168;CL:0000557,1.64e-19,67;CL:0002032,1.71e-18,161;CL:0000837,1.71e-18,161;CL:0002009,1.79e-18,61;CL:0000839,1.98e-18,66;CL:0000860,2.10e-18,42;CL:0002057,2.10e-18,42;CL:0000473,2.73e-18,48;CL:0000234,2.73e-18,48;CL:0000988,3.25e-18,177;CL:0002194,4.24e-18,59;CL:0000576,4.24e-18,59;CL:0000040,4.24e-18,59;CL:0000559,4.24e-18,59;CL:0000763,1.50e-12,108;CL:0000049,1.50e-12,108;CL:0000791,1.02e-08,18;CL:0000789,1.02e-08,18;CL:0002420,1.02e-08,18;CL:0002419,1.02e-08,18;CL:0000790,1.02e-08,18;CL:0000838,8.54e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.10e-13;42!CL:0000790;8.81e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-28!115;UBERON:0002390!5.00e-20!102;UBERON:0003061!5.00e-20!102;UBERON:0002193!1.01e-18!112;UBERON:0002371!2.80e-13!80;UBERON:0001474!3.40e-12!86;UBERON:0002405!4.85e-10!115;UBERON:0004765!2.80e-08!101;UBERON:0001434!2.80e-08!101;UBERON:0001049!3.39e-08!57;UBERON:0005068!3.39e-08!57;UBERON:0006241!3.39e-08!57;UBERON:0007135!3.39e-08!57;UBERON:0002616!6.07e-07!59 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.14e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.02e-28,114;UBERON:0002390,2.70e-22,98;UBERON:0003061,2.70e-22,98;UBERON:0002193,9.32e-21,108;UBERON:0002405,4.91e-16,93;UBERON:0002371,2.72e-15,76;UBERON:0001474,5.31e-14,82;UBERON:0004765,1.57e-10,90;UBERON:0003081,1.13e-08,203;UBERON:0001434,1.19e-08,100;UBERON:0001049,6.14e-08,56;UBERON:0005068,6.14e-08,56;UBERON:0006241,6.14e-08,56;UBERON:0007135,6.14e-08,56;UBERON:0000073,1.90e-07,53;UBERON:0002616,1.90e-07,53 | |||
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| ||
|short_description=p1@ZZEF1 | |||
}} | }} |
Latest revision as of 14:19, 24 September 2015
Short description: | p1@ZZEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZZEF1_5end |
Coexpression cluster: | C612_Neutrophils_Eosinophils_granulocyte_CD14_CD4_acute_CD19 |
Association with transcript: | 0bp_to_ENST00000381638_5end |
EntrezGene: | ZZEF1 |
HGNC: | 29027 |
UniProt: | O43149 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 8.48e-31 | 136 |
hematopoietic lineage restricted progenitor cell | 2.11e-24 | 120 |
nongranular leukocyte | 5.97e-24 | 115 |
myeloid leukocyte | 3.02e-23 | 72 |
hematopoietic stem cell | 1.82e-20 | 168 |
granulocyte monocyte progenitor cell | 1.64e-19 | 67 |
hematopoietic oligopotent progenitor cell | 1.71e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.71e-18 | 161 |
macrophage dendritic cell progenitor | 1.79e-18 | 61 |
myeloid lineage restricted progenitor cell | 1.98e-18 | 66 |
classical monocyte | 2.10e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.10e-18 | 42 |
defensive cell | 2.73e-18 | 48 |
phagocyte | 2.73e-18 | 48 |
hematopoietic cell | 3.25e-18 | 177 |
monopoietic cell | 4.24e-18 | 59 |
monocyte | 4.24e-18 | 59 |
monoblast | 4.24e-18 | 59 |
promonocyte | 4.24e-18 | 59 |
myeloid cell | 1.50e-12 | 108 |
common myeloid progenitor | 1.50e-12 | 108 |
mature alpha-beta T cell | 1.02e-08 | 18 |
alpha-beta T cell | 1.02e-08 | 18 |
immature T cell | 1.02e-08 | 18 |
mature T cell | 1.02e-08 | 18 |
immature alpha-beta T cell | 1.02e-08 | 18 |
lymphoid lineage restricted progenitor cell | 8.54e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.02e-28 | 114 |
hematopoietic system | 2.70e-22 | 98 |
blood island | 2.70e-22 | 98 |
hemolymphoid system | 9.32e-21 | 108 |
immune system | 4.91e-16 | 93 |
bone marrow | 2.72e-15 | 76 |
bone element | 5.31e-14 | 82 |
skeletal element | 1.57e-10 | 90 |
lateral plate mesoderm | 1.13e-08 | 203 |
skeletal system | 1.19e-08 | 100 |
neural tube | 6.14e-08 | 56 |
neural rod | 6.14e-08 | 56 |
future spinal cord | 6.14e-08 | 56 |
neural keel | 6.14e-08 | 56 |
regional part of nervous system | 1.90e-07 | 53 |
regional part of brain | 1.90e-07 | 53 |