FFCP PHASE1:Hg19::chr4:109086403..109086421,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr4:109086403..109086421,-
|short_description=p19@LEF1
|description=CAGE_peak_19_at_LEF1_5end
|association_with_transcript=0bp_to_ENST00000510135,ENST000005107...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000510135,ENST00000510717,uc011cfj.1_5end | |||
|cluster_id=chr4:109086403..109086421,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_19_at_LEF1_5end | |||
|id=chr4:109086403..109086421,- | |||
|ontology_enrichment_celltype=CL:0000791!7.37e-37!18;CL:0000789!7.37e-37!18;CL:0002420!7.37e-37!18;CL:0002419!7.37e-37!18;CL:0000790!7.37e-37!18;CL:0000084!2.15e-33!25;CL:0000827!2.15e-33!25;CL:0000838!8.72e-24!52;CL:0000542!3.17e-23!53;CL:0000051!3.17e-23!53;CL:0000625!4.95e-22!11;CL:0000624!2.64e-19!6;CL:0002087!5.24e-12!119;CL:0000898!1.26e-10!3;CL:0000738!3.75e-10!140;CL:0000842!1.23e-09!3;CL:0000623!2.00e-09!3;CL:0000825!2.00e-09!3;CL:0002031!2.24e-08!124;CL:0000815!4.79e-08!2;CL:0000792!4.79e-08!2;CL:0002677!4.79e-08!2;CL:0000224!2.51e-07!4;CL:0000037!4.48e-07!172;CL:0000566!4.48e-07!172 | |||
|ontology_enrichment_celltype_v019=CL:0000084;6.38e-27;25!CL:0000791;3.40e-24;18!CL:0000789;3.40e-24;18!CL:0002419;3.40e-24;18!CL:0000624;1.54e-19;6!CL:0000815;5.98e-16;2!CL:0000792;5.98e-16;2!CL:0002677;5.98e-16;2!CL:0000898;6.16e-11;3!CL:0000625;2.00e-10;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,5.87e-27,25;CL:0000827,5.87e-27,25;CL:0000791,3.01e-24,18;CL:0000789,3.01e-24,18;CL:0002420,3.01e-24,18;CL:0002419,3.01e-24,18;CL:0000790,3.01e-24,18;CL:0000624,1.77e-19,6;CL:0000815,5.56e-16,2;CL:0000792,5.56e-16,2;CL:0002677,5.56e-16,2;CL:0000838,4.15e-12,52;CL:0000542,7.55e-12,53;CL:0000051,7.55e-12,53;CL:0000898,5.87e-11,3;CL:0000625,1.68e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000790;3.40e-24;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.34e-12!15;UBERON:0000179!3.34e-12!15;UBERON:0000463!3.34e-12!15;UBERON:0004177!3.74e-11!7;UBERON:0002370!3.95e-08!4;UBERON:0005058!3.95e-08!4;UBERON:0009113!3.95e-08!4;UBERON:0003295!3.95e-08!4;UBERON:0005562!3.95e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.30e-16;2!UBERON:0005058;3.30e-16;2!UBERON:0009113;3.30e-16;2!UBERON:0000178;1.06e-07;15!UBERON:0000179;1.06e-07;15!UBERON:0000463;1.06e-07;15!UBERON:0004177;5.44e-07;5!UBERON:0005057;5.44e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.53e-08,4;UBERON:0005058,1.53e-08,4;UBERON:0009113,1.53e-08,4;UBERON:0003295,1.53e-08,4;UBERON:0005562,1.53e-08,4;UBERON:0000178,1.17e-07,15;UBERON:0000179,1.17e-07,15;UBERON:0000463,1.17e-07,15 | |||
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| ||
|short_description=p19@LEF1 | |||
}} | }} |
Latest revision as of 14:44, 24 September 2015
Short description: | p19@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_LEF1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 0bp_to_ENST00000510135, ENST00000510717, uc011cfj.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 5.87e-27 | 25 |
pro-T cell | 5.87e-27 | 25 |
mature alpha-beta T cell | 3.01e-24 | 18 |
alpha-beta T cell | 3.01e-24 | 18 |
immature T cell | 3.01e-24 | 18 |
mature T cell | 3.01e-24 | 18 |
immature alpha-beta T cell | 3.01e-24 | 18 |
CD4-positive, alpha-beta T cell | 1.77e-19 | 6 |
regulatory T cell | 5.56e-16 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 5.56e-16 | 2 |
naive regulatory T cell | 5.56e-16 | 2 |
lymphoid lineage restricted progenitor cell | 4.15e-12 | 52 |
lymphocyte | 7.55e-12 | 53 |
common lymphoid progenitor | 7.55e-12 | 53 |
naive T cell | 5.87e-11 | 3 |
CD8-positive, alpha-beta T cell | 1.68e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
thymus | 1.53e-08 | 4 |
hemolymphoid system gland | 1.53e-08 | 4 |
thymic region | 1.53e-08 | 4 |
pharyngeal gland | 1.53e-08 | 4 |
thymus primordium | 1.53e-08 | 4 |
blood | 1.17e-07 | 15 |
haemolymphatic fluid | 1.17e-07 | 15 |
organism substance | 1.17e-07 | 15 |