FFCP PHASE1:Hg19::chr4:109089573..109089585,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2 | |UniProt=Q9UJU2 | ||
|association_with_transcript=0bp_to_ENST00000265165,uc003hyt.1,uc003hyu.1,uc003hyv.1,uc010imb.1_5end | |association_with_transcript=0bp_to_ENST00000265165,uc003hyt.1,uc003hyu.1,uc003hyv.1,uc010imb.1_5end | ||
|cluster_id=chr4:109089573..109089585,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_8_at_LEF1_5end | |description=CAGE_peak_8_at_LEF1_5end | ||
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|ontology_enrichment_celltype=CL:0000791!8.64e-20!18;CL:0000789!8.64e-20!18;CL:0002420!8.64e-20!18;CL:0002419!8.64e-20!18;CL:0000790!8.64e-20!18;CL:0000084!2.32e-18!25;CL:0000827!2.32e-18!25;CL:0000625!4.22e-14!11;CL:0000542!3.04e-12!53;CL:0000051!3.04e-12!53;CL:0000838!1.37e-11!52;CL:0000624!7.21e-09!6;CL:0000738!1.90e-08!140;CL:0002087!4.90e-08!119 | |ontology_enrichment_celltype=CL:0000791!8.64e-20!18;CL:0000789!8.64e-20!18;CL:0002420!8.64e-20!18;CL:0002419!8.64e-20!18;CL:0000790!8.64e-20!18;CL:0000084!2.32e-18!25;CL:0000827!2.32e-18!25;CL:0000625!4.22e-14!11;CL:0000542!3.04e-12!53;CL:0000051!3.04e-12!53;CL:0000838!1.37e-11!52;CL:0000624!7.21e-09!6;CL:0000738!1.90e-08!140;CL:0002087!4.90e-08!119 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.60e-43;18!CL:0000789;3.60e-43;18!CL:0002419;3.60e-43;18!CL:0000084;5.66e-43;25!CL:0000625;8.26e-28;11!CL:0000624;7.11e-20;6!CL:0000542;1.14e-13;53!CL:0000898;9.44e-11;3!CL:0000226;2.01e-10;3!CL:0000842;2.01e-10;3!CL:0000623;1.62e-09;3!CL:0000815;7.98e-08;2!CL:0000792;7.98e-08;2!CL:0002677;7.98e-08;2 | |ontology_enrichment_celltype_v019=CL:0000791;3.60e-43;18!CL:0000789;3.60e-43;18!CL:0002419;3.60e-43;18!CL:0000084;5.66e-43;25!CL:0000625;8.26e-28;11!CL:0000624;7.11e-20;6!CL:0000542;1.14e-13;53!CL:0000898;9.44e-11;3!CL:0000226;2.01e-10;3!CL:0000842;2.01e-10;3!CL:0000623;1.62e-09;3!CL:0000815;7.98e-08;2!CL:0000792;7.98e-08;2!CL:0002677;7.98e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000791,3.23e-43,18;CL:0000789,3.23e-43,18;CL:0002420,3.23e-43,18;CL:0002419,3.23e-43,18;CL:0000790,3.23e-43,18;CL:0000084,5.28e-43,25;CL:0000827,5.28e-43,25;CL:0000625,7.82e-28,11;CL:0000838,4.31e-27,52;CL:0000542,1.84e-26,53;CL:0000051,1.84e-26,53;CL:0000624,6.68e-20,6;CL:0002087,3.01e-13,115;CL:0000738,3.56e-11,136;CL:0000898,9.15e-11,3;CL:0000226,1.69e-10,3;CL:0000842,1.69e-10,3;CL:0000623,1.18e-09,3;CL:0000825,1.18e-09,3;CL:0002031,3.51e-09,120;CL:0000037,1.51e-08,168;CL:0000815,7.60e-08,2;CL:0000792,7.60e-08,2;CL:0002677,7.60e-08,2;CL:0000988,8.88e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000790;3.60e-43;18!CL:0000051;1.14e-13;53 | |ontology_enrichment_development_v019=CL:0000790;3.60e-43;18!CL:0000051;1.14e-13;53 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-20!115;UBERON:0000178!2.41e-10!15;UBERON:0000179!2.41e-10!15;UBERON:0000463!2.41e-10!15;UBERON:0002298!4.24e-07!8 | |ontology_enrichment_uberon=UBERON:0007023!3.57e-20!115;UBERON:0000178!2.41e-10!15;UBERON:0000179!2.41e-10!15;UBERON:0000463!2.41e-10!15;UBERON:0002298!4.24e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-18;15!UBERON:0000179;1.03e-18;15!UBERON:0000463;1.03e-18;15!UBERON:0002390;8.05e-11;32!UBERON:0002193;8.76e-09;42!UBERON:0002370;5.18e-08;2!UBERON:0005058;5.18e-08;2!UBERON:0009113;5.18e-08;2 | |ontology_enrichment_uberon_v019=UBERON:0000178;1.03e-18;15!UBERON:0000179;1.03e-18;15!UBERON:0000463;1.03e-18;15!UBERON:0002390;8.05e-11;32!UBERON:0002193;8.76e-09;42!UBERON:0002370;5.18e-08;2!UBERON:0005058;5.18e-08;2!UBERON:0009113;5.18e-08;2 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.11e-18,15;UBERON:0000179,1.11e-18,15;UBERON:0000463,1.11e-18,15;UBERON:0002370,2.80e-08,4;UBERON:0005058,2.80e-08,4;UBERON:0009113,2.80e-08,4;UBERON:0003295,2.80e-08,4;UBERON:0005562,2.80e-08,4 | |||
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| ||
|short_description=p8@LEF1 | |short_description=p8@LEF1 | ||
}} | }} |
Latest revision as of 15:10, 24 September 2015
Short description: | p8@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_LEF1_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | 0bp_to_ENST00000265165, uc003hyt.1, uc003hyu.1, uc003hyv.1, uc010imb.1_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 3.23e-43 | 18 |
alpha-beta T cell | 3.23e-43 | 18 |
immature T cell | 3.23e-43 | 18 |
mature T cell | 3.23e-43 | 18 |
immature alpha-beta T cell | 3.23e-43 | 18 |
T cell | 5.28e-43 | 25 |
pro-T cell | 5.28e-43 | 25 |
CD8-positive, alpha-beta T cell | 7.82e-28 | 11 |
lymphoid lineage restricted progenitor cell | 4.31e-27 | 52 |
lymphocyte | 1.84e-26 | 53 |
common lymphoid progenitor | 1.84e-26 | 53 |
CD4-positive, alpha-beta T cell | 6.68e-20 | 6 |
nongranular leukocyte | 3.01e-13 | 115 |
leukocyte | 3.56e-11 | 136 |
naive T cell | 9.15e-11 | 3 |
single nucleate cell | 1.69e-10 | 3 |
mononuclear cell | 1.69e-10 | 3 |
natural killer cell | 1.18e-09 | 3 |
pro-NK cell | 1.18e-09 | 3 |
hematopoietic lineage restricted progenitor cell | 3.51e-09 | 120 |
hematopoietic stem cell | 1.51e-08 | 168 |
regulatory T cell | 7.60e-08 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 7.60e-08 | 2 |
naive regulatory T cell | 7.60e-08 | 2 |
hematopoietic cell | 8.88e-08 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 1.11e-18 | 15 |
haemolymphatic fluid | 1.11e-18 | 15 |
organism substance | 1.11e-18 | 15 |
thymus | 2.80e-08 | 4 |
hemolymphoid system gland | 2.80e-08 | 4 |
thymic region | 2.80e-08 | 4 |
pharyngeal gland | 2.80e-08 | 4 |
thymus primordium | 2.80e-08 | 4 |