FFCP PHASE1:Hg19::chr4:109090054..109090073,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2,Q659G9 | |||
|association_with_transcript=38bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |||
|cluster_id=chr4:109090054..109090073,- | |||
|coexpression_cluster_id=C28 | |||
|description=CAGE_peak_7_at_LEF1_5end | |||
|id=chr4:109090054..109090073,- | |||
|ontology_enrichment_celltype=CL:0000791!8.38e-18!18;CL:0000789!8.38e-18!18;CL:0002420!8.38e-18!18;CL:0002419!8.38e-18!18;CL:0000790!8.38e-18!18;CL:0000084!9.54e-17!25;CL:0000827!9.54e-17!25;CL:0000625!1.47e-12!11;CL:0000542!9.37e-10!53;CL:0000051!9.37e-10!53;CL:0000838!2.48e-09!52;CL:0000624!2.64e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0000084;1.55e-33;25!CL:0000791;1.55e-32;18!CL:0000789;1.55e-32;18!CL:0002419;1.55e-32;18!CL:0000625;2.79e-19;11!CL:0000624;1.64e-17;6!CL:0000542;9.95e-11;53!CL:0000898;1.72e-09;3!CL:0000226;4.77e-09;3!CL:0000842;4.77e-09;3!CL:0000623;1.29e-08;3!CL:0000815;5.49e-07;2!CL:0000792;5.49e-07;2!CL:0002677;5.49e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.19e-33,25;CL:0000827,1.19e-33,25;CL:0000791,1.14e-32,18;CL:0000789,1.14e-32,18;CL:0002420,1.14e-32,18;CL:0002419,1.14e-32,18;CL:0000790,1.14e-32,18;CL:0000838,2.80e-21,52;CL:0000542,9.17e-21,53;CL:0000051,9.17e-21,53;CL:0000625,1.85e-19,11;CL:0000624,1.90e-17,6;CL:0002087,6.77e-10,115;CL:0000898,2.14e-09,3;CL:0000226,4.22e-09,3;CL:0000842,4.22e-09,3;CL:0000623,8.44e-09,3;CL:0000825,8.44e-09,3;CL:0000738,2.77e-08,136;CL:0000037,1.82e-07,168;CL:0000815,6.37e-07,2;CL:0000792,6.37e-07,2;CL:0002677,6.37e-07,2;CL:0000988,9.57e-07,177 | |||
|ontology_enrichment_development_v019=CL:0000790;1.55e-32;18!CL:0000051;9.95e-11;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!5.72e-13!15;UBERON:0000179!5.72e-13!15;UBERON:0000463!5.72e-13!15;UBERON:0007023!6.89e-12!115;UBERON:0001893!1.15e-07!34;UBERON:0002791!2.88e-07!33;UBERON:0001869!8.19e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.79e-16;15!UBERON:0000179;4.79e-16;15!UBERON:0000463;4.79e-16;15!UBERON:0002390;1.63e-12;32!UBERON:0002370;1.42e-07;2!UBERON:0005058;1.42e-07;2!UBERON:0009113;1.42e-07;2!UBERON:0002193;1.64e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.87e-16,15;UBERON:0000179,3.87e-16,15;UBERON:0000463,3.87e-16,15;UBERON:0002370,1.34e-07,4;UBERON:0005058,1.34e-07,4;UBERON:0009113,1.34e-07,4;UBERON:0003295,1.34e-07,4;UBERON:0005562,1.34e-07,4;UBERON:0004177,5.85e-07,7;UBERON:0005057,5.85e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0.401088894940283,1.08505435357926,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05353633910031,4.91774425284583,3.93010762749165,3.49522548299166,0.83593247695339,8.79990119910694,5.20792586308207,3.89653456815823,0.111410456885174,2.06224135232386,2.65840673500345,2.43723477388514,0.128091319725675,0.650296737799391,1.64437904603676,1.65810010671509,2.31842468588042,7.71090128442714,9.63146981122967,12.5442628565972,0.453237370790265,2.29932296161153,2.40539211837841,1.01207876807801,1.59282707162048,0.651083453856419,1.90090408889675,3.46322773878877,3.96758494578697,1.24930726552346,2.60454977248419,3.28451198768419,2.41928091869679,0.267440195783507,4.48955652036677,0,0,0,0,0,0,0,0.486634870302636,0,0.221729397462564,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505008341862199,0,0,0,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0.518305275076852,0.252320850875628,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,12.3609667836102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0.190493682876507,0,1.17217447210047,0,0.205654985406647,1.50171528921959,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37921532141349,1.72502059887614,2.82354679815446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,3.92859249633486,1.50999940573032,2.34800627167578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.103041011647722,0.366277859273374,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,1.52927441428475,0.569647187174163,1.90585420366231,1.23408681925858,1.29694662238543,2.16012574895246,0.79312517629427,0,0,0,0.185803175125719,8.65615277858669,28.5990210260625,9.88442890918699,0,0.191505370132367,0.211673582723883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.33307196799782,0,0,0,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0.185536196323703,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0.241192877250816,0,0,0,0.219385397153973,0,0,0.307801034015188,0,0,0,0,0,0,0,9.19739683761629,2.04074333313532,0.664846727600626,0.225595660617181,0.980312671588698,0.335643173951685,0,2.06617552674492,0.210998064528027,0,0.141353071433941,5.40971599355228,0,0.0884575645033392,0,0.296521128680622,0,0.104421949505455,0.202203398942031,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0,0.311064574191741,0,0.330991955875499,0.313932918407225,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0.0633107959558787,0,0,0,0,0,0.343609788497747,0,0,0,0,0,0.104602846312333,0.203996435272644,0,0,0.547621515567972,1.27746588066972,0,0,0,0.229160424011684,0,0.199679000498991,0,0,0.268733889946905,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,1.19730191562487,0.410462603746695,0,0,0,0,0,0,0,0,0.213574825135389,0,0,2.48083010905975,3.557009374163,0,0,0,0,0,0,1.88464915500281,0,0.244052529803926,0,0,0,0.248385611765534,0,0,0.606596470166591,3.14011866899464,0,0,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,0,1.67593475391973,0,15.5357637652469,0,0,0.918736432059601,0.321146125482298,0,0.159633859057151,0.41023272848151,1.00828678488687,0.0691572524642179,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0.147856086217045,0.135075169236789,0,0.206686796501184,0.317079050969534,0.546974809018219,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0.328863867814245,0,0,0,0,0.560544326627578,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,1.45713297917742,0.233939463462106,6.96327713064789,0,6.09908843010384,0,2.71733118420012,0.0771741581079447,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,1.4180735354187,0.399764623699716,0,0,0,0,0,0.143339583151451,2.0510303085114,0.135982980381829,0,0,0,0,0,0,0,2.02717601618299,0,0,0,0,0.303114792872958,0.267964130156178,0.829169439458779,0,0.213233981900981,1.42838658878244,43.2099806802881,33.8307192912426,0.112131862580613,0.0636471582781649,0.202117188958219,0.217716747896961,0,0.740872583160463,0.358611026963382,0,0,0,0,0,0,0.244482888365733,0,0,5.43439242695771,0 | |||
|short_description=p7@LEF1 | |||
}} |
Latest revision as of 15:12, 24 September 2015
Short description: | p7@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LEF1_5end |
Coexpression cluster: | C28_thymus_acute_vein_Hodgkin_chronic_throat_Dendritic |
Association with transcript: | 38bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.19e-33 | 25 |
pro-T cell | 1.19e-33 | 25 |
mature alpha-beta T cell | 1.14e-32 | 18 |
alpha-beta T cell | 1.14e-32 | 18 |
immature T cell | 1.14e-32 | 18 |
mature T cell | 1.14e-32 | 18 |
immature alpha-beta T cell | 1.14e-32 | 18 |
lymphoid lineage restricted progenitor cell | 2.80e-21 | 52 |
lymphocyte | 9.17e-21 | 53 |
common lymphoid progenitor | 9.17e-21 | 53 |
CD8-positive, alpha-beta T cell | 1.85e-19 | 11 |
CD4-positive, alpha-beta T cell | 1.90e-17 | 6 |
nongranular leukocyte | 6.77e-10 | 115 |
naive T cell | 2.14e-09 | 3 |
single nucleate cell | 4.22e-09 | 3 |
mononuclear cell | 4.22e-09 | 3 |
natural killer cell | 8.44e-09 | 3 |
pro-NK cell | 8.44e-09 | 3 |
leukocyte | 2.77e-08 | 136 |
hematopoietic stem cell | 1.82e-07 | 168 |
regulatory T cell | 6.37e-07 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.37e-07 | 2 |
naive regulatory T cell | 6.37e-07 | 2 |
hematopoietic cell | 9.57e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 3.87e-16 | 15 |
haemolymphatic fluid | 3.87e-16 | 15 |
organism substance | 3.87e-16 | 15 |
thymus | 1.34e-07 | 4 |
hemolymphoid system gland | 1.34e-07 | 4 |
thymic region | 1.34e-07 | 4 |
pharyngeal gland | 1.34e-07 | 4 |
thymus primordium | 1.34e-07 | 4 |
hemopoietic organ | 5.85e-07 | 7 |
immune organ | 5.85e-07 | 7 |