FFCP PHASE1:Hg19::chr4:109090408..109090441,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51176 | |EntrezGene=51176 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6551 | |HGNC=6551 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJU2,Q659G9 | |UniProt=Q9UJU2,Q659G9 | ||
|association_with_transcript=-296bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | |association_with_transcript=-296bp_to_ENST00000379951,NM_001130713,NM_001130714,NM_016269_5end | ||
|cluster_id=chr4:109090408..109090441,- | |||
|description=CAGE_peak_21_at_LEF1_5end | |description=CAGE_peak_21_at_LEF1_5end | ||
|id=chr4:109090408..109090441,- | |id=chr4:109090408..109090441,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000817;4.27e-10;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.76e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1325;2.12e-11;7!DOID:3904;2.12e-11;7!DOID:5409;1.65e-09;4!DOID:3905;5.59e-09;9 | |||
|ontology_enrichment_disease_v019_2=DOID:1325,2.40e-11,7;DOID:3904,2.40e-11,7;DOID:5409,1.69e-09,4;DOID:3905,6.16e-09,9 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.71e-40!57;UBERON:0005068!1.71e-40!57;UBERON:0006241!1.71e-40!57;UBERON:0007135!1.71e-40!57;UBERON:0002020!4.47e-36!34;UBERON:0003528!4.47e-36!34;UBERON:0001893!7.05e-36!34;UBERON:0002791!2.93e-34!33;UBERON:0002616!4.68e-34!59;UBERON:0002780!1.75e-33!41;UBERON:0001890!1.75e-33!41;UBERON:0006240!1.75e-33!41;UBERON:0001869!9.54e-33!32;UBERON:0003080!1.70e-32!42;UBERON:0000955!8.36e-29!69;UBERON:0006238!8.36e-29!69;UBERON:0002619!1.28e-27!22;UBERON:0001950!2.21e-27!20;UBERON:0001017!6.56e-26!82;UBERON:0005743!3.27e-24!86;UBERON:0007023!4.52e-24!115;UBERON:0000956!8.82e-24!25;UBERON:0000203!8.82e-24!25;UBERON:0003075!3.48e-23!86;UBERON:0007284!3.48e-23!86;UBERON:0000073!2.02e-22!94;UBERON:0001016!2.02e-22!94;UBERON:0002346!1.11e-21!90;UBERON:0003056!7.40e-20!61;UBERON:0000153!1.50e-16!129;UBERON:0007811!1.50e-16!129;UBERON:0000033!1.52e-14!123;UBERON:0002308!4.77e-14!9;UBERON:0000125!4.77e-14!9;UBERON:0001871!1.44e-12!7;UBERON:0000200!1.71e-12!6;UBERON:0002420!7.60e-11!9;UBERON:0007245!7.60e-11!9;UBERON:0010009!7.60e-11!9;UBERON:0010011!7.60e-11!9;UBERON:0000454!7.60e-11!9;UBERON:0009663!1.10e-10!7;UBERON:0001872!5.15e-10!5;UBERON:0004121!2.51e-09!169;UBERON:0003076!3.99e-09!15;UBERON:0003057!3.99e-09!15;UBERON:0000924!6.97e-09!173;UBERON:0006601!6.97e-09!173;UBERON:0004732!1.54e-08!13;UBERON:0000025!2.12e-08!194;UBERON:0002298!2.79e-08!8;UBERON:0000064!5.68e-08!219;UBERON:0002771!1.77e-07!3;UBERON:0005383!3.55e-07!3;UBERON:0005382!3.55e-07!3;UBERON:0004733!5.04e-07!12;UBERON:0002028!5.04e-07!12;UBERON:0007277!5.04e-07!12;UBERON:0006331!8.94e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.28e-18;2!UBERON:0005058;5.28e-18;2!UBERON:0009113;5.28e-18;2!UBERON:0000941;1.76e-09;1!UBERON:0001785;1.76e-09;1!UBERON:0002464;1.76e-09;1!UBERON:0004904;1.76e-09;1!UBERON:0001021;1.76e-09;1!UBERON:0004177;9.76e-08;5!UBERON:0005057;9.76e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.62e-09,1;UBERON:0001785,1.62e-09,1;UBERON:0002464,1.62e-09,1;UBERON:0004904,1.62e-09,1;UBERON:0001021,1.62e-09,1;UBERON:0003902,1.62e-09,1;UBERON:0005425,1.62e-09,1;UBERON:0002370,1.92e-09,4;UBERON:0005058,1.92e-09,4;UBERON:0009113,1.92e-09,4;UBERON:0003295,1.92e-09,4;UBERON:0005562,1.92e-09,4;UBERON:0004807,2.28e-07,28 | |||
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| ||
|short_description=p21@LEF1 | |short_description=p21@LEF1 | ||
}} | }} |
Latest revision as of 15:15, 24 September 2015
Short description: | p21@LEF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_LEF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -296bp_to_ENST00000379951, NM_001130713, NM_001130714, NM_016269_5end |
EntrezGene: | LEF1 |
HGNC: | 6551 |
UniProt: | Q9UJU2Q659G9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.62e-09 | 1 |
cranial nerve | 1.62e-09 | 1 |
nerve trunk | 1.62e-09 | 1 |
nerve connecting eye with brain | 1.62e-09 | 1 |
nerve | 1.62e-09 | 1 |
retinal neural layer | 1.62e-09 | 1 |
presumptive neural retina | 1.62e-09 | 1 |
thymus | 1.92e-09 | 4 |
hemolymphoid system gland | 1.92e-09 | 4 |
thymic region | 1.92e-09 | 4 |
pharyngeal gland | 1.92e-09 | 4 |
thymus primordium | 1.92e-09 | 4 |
respiratory system epithelium | 2.28e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
bronchus cancer | 2.40e-11 | 7 |
bronchogenic carcinoma | 2.40e-11 | 7 |
lung small cell carcinoma | 1.69e-09 | 4 |
lung carcinoma | 6.16e-09 | 9 |