FFCP PHASE1:Hg19::chr7:100771891..100771905,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5054 | |EntrezGene=5054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8583 | |HGNC=8583 | ||
|TSSclassifier=strong | |||
|UniProt=P05121 | |UniProt=P05121 | ||
|association_with_transcript=159bp_to_M14083_5end | |association_with_transcript=159bp_to_M14083_5end | ||
|cluster_id=chr7:100771891..100771905,+ | |||
|coexpression_cluster_id=C301 | |coexpression_cluster_id=C301 | ||
|description=CAGE_peak_11_at_SERPINE1_5end | |description=CAGE_peak_11_at_SERPINE1_5end | ||
|id=chr7:100771891..100771905,+ | |id=chr7:100771891..100771905,+ | ||
|ontology_enrichment_celltype=CL:0000222!4.49e-38!119;CL:0000055!4.20e-28!180;CL:0000680!2.21e-26!57;CL:0000056!2.21e-26!57;CL:0000355!2.21e-26!57;CL:0000192!1.18e-25!42;CL:0000514!1.18e-25!42;CL:0000187!8.39e-25!54;CL:0000359!1.35e-24!32;CL:0000144!2.01e-23!625;CL:0000183!2.91e-23!59;CL:0002371!3.90e-22!591;CL:0000220!1.03e-21!246;CL:0002321!3.68e-21!248;CL:0000393!3.24e-20!60;CL:0000211!3.24e-20!60;CL:0000548!1.61e-16!679;CL:0000004!1.61e-16!679;CL:0000255!1.61e-16!679;CL:0000012!4.86e-16!682;CL:0000213!1.62e-13!57;CL:0000215!1.62e-13!57;CL:0002139!3.90e-13!24;CL:0000057!3.99e-13!75;CL:0000115!1.15e-12!35;CL:0002078!3.27e-12!44;CL:0000003!3.68e-10!722;CL:0000071!5.67e-10!18;CL:0002546!5.67e-10!18;CL:0000048!1.37e-09!430;CL:0000723!1.44e-09!436;CL:0002539!3.26e-09!10;CL:0000034!8.36e-09!444;CL:1000413!9.56e-07!9 | |ontology_enrichment_celltype=CL:0000222!4.49e-38!119;CL:0000055!4.20e-28!180;CL:0000680!2.21e-26!57;CL:0000056!2.21e-26!57;CL:0000355!2.21e-26!57;CL:0000192!1.18e-25!42;CL:0000514!1.18e-25!42;CL:0000187!8.39e-25!54;CL:0000359!1.35e-24!32;CL:0000144!2.01e-23!625;CL:0000183!2.91e-23!59;CL:0002371!3.90e-22!591;CL:0000220!1.03e-21!246;CL:0002321!3.68e-21!248;CL:0000393!3.24e-20!60;CL:0000211!3.24e-20!60;CL:0000548!1.61e-16!679;CL:0000004!1.61e-16!679;CL:0000255!1.61e-16!679;CL:0000012!4.86e-16!682;CL:0000213!1.62e-13!57;CL:0000215!1.62e-13!57;CL:0002139!3.90e-13!24;CL:0000057!3.99e-13!75;CL:0000115!1.15e-12!35;CL:0002078!3.27e-12!44;CL:0000003!3.68e-10!722;CL:0000071!5.67e-10!18;CL:0002546!5.67e-10!18;CL:0000048!1.37e-09!430;CL:0000723!1.44e-09!436;CL:0002539!3.26e-09!10;CL:0000034!8.36e-09!444;CL:1000413!9.56e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.23e-35;32!CL:0000192;2.57e-22;43!CL:0000187;2.57e-15;55!CL:0002539;7.60e-15;10!CL:0000393;9.21e-11;61!CL:0000211;9.21e-11;61!CL:0000115;2.46e-10;36!CL:0002139;6.80e-09;24!CL:0002494;1.25e-08;16!CL:0002595;1.44e-08;5!CL:0000723;6.70e-08;61!CL:0002188;2.20e-07;5!CL:0000213;3.27e-07;58!CL:0000215;3.27e-07;58!CL:0000134;9.33e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.48e-37,32;CL:0000222,1.13e-36,121;CL:0000192,1.45e-30,43;CL:0000514,1.45e-30,43;CL:0000187,2.76e-27,55;CL:0000680,4.91e-27,58;CL:0000056,4.91e-27,58;CL:0000355,4.91e-27,58;CL:0000393,2.17e-23,61;CL:0000211,2.17e-23,61;CL:0002539,6.24e-15,10;CL:0002321,2.58e-14,250;CL:0000213,7.57e-12,58;CL:0000215,7.57e-12,58;CL:0000115,2.38e-11,36;CL:0002139,4.19e-09,24;CL:0002078,6.57e-09,45;CL:0002494,7.97e-09,16;CL:0000048,1.17e-08,427;CL:0002595,1.90e-08,5;CL:0000723,3.28e-08,433;CL:0000034,1.22e-07,441;CL:0002188,2.56e-07,5;CL:0002594,9.43e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000514;2.57e-22;43!CL:0000355;8.62e-14;58!CL:0000222;1.73e-08;121 | |||
|ontology_enrichment_disease=DOID:2394!1.41e-08!14 | |ontology_enrichment_disease=DOID:2394!1.41e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;3.26e-11;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.69e-11,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!4.87e-40!79;UBERON:0007798!4.87e-40!79;UBERON:0000055!2.37e-37!69;UBERON:0001981!2.90e-33!60;UBERON:0007500!2.90e-33!60;UBERON:0004537!2.90e-33!60;UBERON:0006965!2.90e-33!60;UBERON:0004872!6.58e-32!84;UBERON:0004535!3.14e-31!110;UBERON:0001637!3.78e-30!42;UBERON:0003509!3.78e-30!42;UBERON:0004572!3.78e-30!42;UBERON:0003914!1.61e-29!118;UBERON:0001009!1.85e-29!113;UBERON:0000490!1.14e-25!138;UBERON:0000914!2.13e-24!83;UBERON:0002329!2.13e-24!83;UBERON:0003077!2.13e-24!83;UBERON:0003059!2.13e-24!83;UBERON:0007282!2.13e-24!83;UBERON:0009618!2.13e-24!83;UBERON:0007285!2.13e-24!83;UBERON:0000486!1.64e-23!82;UBERON:0004290!1.72e-23!70;UBERON:0004573!2.57e-23!33;UBERON:0004571!2.57e-23!33;UBERON:0001134!3.62e-23!61;UBERON:0002036!3.62e-23!61;UBERON:0003082!3.62e-23!61;UBERON:0005256!3.38e-22!143;UBERON:0002385!9.88e-22!63;UBERON:0001015!9.88e-22!63;UBERON:0000383!9.88e-22!63;UBERON:0000119!2.45e-14!312;UBERON:0000947!4.63e-14!21;UBERON:0010191!4.63e-14!21;UBERON:0000483!1.09e-13!309;UBERON:0002100!1.60e-13!216;UBERON:0000477!3.01e-11!286;UBERON:0004111!1.08e-10!241;UBERON:0000487!2.20e-10!22;UBERON:0006914!5.65e-10!25;UBERON:0001986!5.67e-10!18;UBERON:0004638!5.67e-10!18;UBERON:0004852!5.67e-10!18;UBERON:0000025!2.10e-09!194;UBERON:0003104!2.74e-09!238;UBERON:0009142!2.74e-09!238;UBERON:0004237!3.26e-09!10;UBERON:0004695!3.26e-09!10;UBERON:0002111!3.26e-09!10;UBERON:0004178!3.26e-09!10;UBERON:0000926!5.47e-08!448;UBERON:0004120!5.47e-08!448;UBERON:0006603!5.47e-08!448;UBERON:0001135!5.63e-08!15;UBERON:0000475!1.05e-07!365;UBERON:0003513!3.37e-07!8;UBERON:0000468!7.81e-07!659;UBERON:0003915!9.56e-07!9;UBERON:0004700!9.56e-07!9;UBERON:0001917!9.56e-07!9 | |ontology_enrichment_uberon=UBERON:0002049!4.87e-40!79;UBERON:0007798!4.87e-40!79;UBERON:0000055!2.37e-37!69;UBERON:0001981!2.90e-33!60;UBERON:0007500!2.90e-33!60;UBERON:0004537!2.90e-33!60;UBERON:0006965!2.90e-33!60;UBERON:0004872!6.58e-32!84;UBERON:0004535!3.14e-31!110;UBERON:0001637!3.78e-30!42;UBERON:0003509!3.78e-30!42;UBERON:0004572!3.78e-30!42;UBERON:0003914!1.61e-29!118;UBERON:0001009!1.85e-29!113;UBERON:0000490!1.14e-25!138;UBERON:0000914!2.13e-24!83;UBERON:0002329!2.13e-24!83;UBERON:0003077!2.13e-24!83;UBERON:0003059!2.13e-24!83;UBERON:0007282!2.13e-24!83;UBERON:0009618!2.13e-24!83;UBERON:0007285!2.13e-24!83;UBERON:0000486!1.64e-23!82;UBERON:0004290!1.72e-23!70;UBERON:0004573!2.57e-23!33;UBERON:0004571!2.57e-23!33;UBERON:0001134!3.62e-23!61;UBERON:0002036!3.62e-23!61;UBERON:0003082!3.62e-23!61;UBERON:0005256!3.38e-22!143;UBERON:0002385!9.88e-22!63;UBERON:0001015!9.88e-22!63;UBERON:0000383!9.88e-22!63;UBERON:0000119!2.45e-14!312;UBERON:0000947!4.63e-14!21;UBERON:0010191!4.63e-14!21;UBERON:0000483!1.09e-13!309;UBERON:0002100!1.60e-13!216;UBERON:0000477!3.01e-11!286;UBERON:0004111!1.08e-10!241;UBERON:0000487!2.20e-10!22;UBERON:0006914!5.65e-10!25;UBERON:0001986!5.67e-10!18;UBERON:0004638!5.67e-10!18;UBERON:0004852!5.67e-10!18;UBERON:0000025!2.10e-09!194;UBERON:0003104!2.74e-09!238;UBERON:0009142!2.74e-09!238;UBERON:0004237!3.26e-09!10;UBERON:0004695!3.26e-09!10;UBERON:0002111!3.26e-09!10;UBERON:0004178!3.26e-09!10;UBERON:0000926!5.47e-08!448;UBERON:0004120!5.47e-08!448;UBERON:0006603!5.47e-08!448;UBERON:0001135!5.63e-08!15;UBERON:0000475!1.05e-07!365;UBERON:0003513!3.37e-07!8;UBERON:0000468!7.81e-07!659;UBERON:0003915!9.56e-07!9;UBERON:0004700!9.56e-07!9;UBERON:0001917!9.56e-07!9 | ||
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| ||
|short_description=p11@SERPINE1 | |short_description=p11@SERPINE1 | ||
}} | }} |
Latest revision as of 15:45, 24 September 2015
Short description: | p11@SERPINE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SERPINE1_5end |
Coexpression cluster: | C301_Smooth_mesenchymal_Endothelial_Hepatic_basal_hepatic_chorionic |
Association with transcript: | 159bp_to_M14083_5end |
EntrezGene: | SERPINE1 |
HGNC: | 8583 |
UniProt: | P05121 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.48e-37 | 32 |
mesodermal cell | 1.13e-36 | 121 |
smooth muscle cell | 1.45e-30 | 43 |
smooth muscle myoblast | 1.45e-30 | 43 |
muscle cell | 2.76e-27 | 55 |
muscle precursor cell | 4.91e-27 | 58 |
myoblast | 4.91e-27 | 58 |
multi-potent skeletal muscle stem cell | 4.91e-27 | 58 |
electrically responsive cell | 2.17e-23 | 61 |
electrically active cell | 2.17e-23 | 61 |
aortic smooth muscle cell | 6.24e-15 | 10 |
embryonic cell | 2.58e-14 | 250 |
lining cell | 7.57e-12 | 58 |
barrier cell | 7.57e-12 | 58 |
endothelial cell | 2.38e-11 | 36 |
endothelial cell of vascular tree | 4.19e-09 | 24 |
meso-epithelial cell | 6.57e-09 | 45 |
cardiocyte | 7.97e-09 | 16 |
multi fate stem cell | 1.17e-08 | 427 |
smooth muscle cell of the subclavian artery | 1.90e-08 | 5 |
somatic stem cell | 3.28e-08 | 433 |
stem cell | 1.22e-07 | 441 |
glomerular endothelial cell | 2.56e-07 | 5 |
smooth muscle cell of the umbilical artery | 9.43e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.69e-11 | 14 |