FFCP PHASE1:Hg19::chr4:110481461..110481471,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:110481461..110481471,+ to FFCP PHASE1:Hg19::chr4:110481461..110481471,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55013 | |EntrezGene=55013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26076 | |HGNC=26076 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=93bp_to_ENST00000515114_5end | |||
|cluster_id=chr4:110481461..110481471,+ | |||
|description=CAGE_peak_4_at_CCDC109B_5end | |||
|id=chr4:110481461..110481471,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.70e-27!119;CL:0000738!5.30e-23!140;CL:0002031!5.31e-23!124;CL:0002057!5.53e-16!42;CL:0000838!1.00e-15!52;CL:0000542!1.19e-15!53;CL:0000051!1.19e-15!53;CL:0000860!8.45e-15!45;CL:0000037!4.28e-14!172;CL:0000566!4.28e-14!172;CL:0000084!6.42e-14!25;CL:0000827!6.42e-14!25;CL:0000723!6.74e-14!436;CL:0000048!1.80e-13!430;CL:0000988!4.44e-13!182;CL:0000034!4.64e-13!444;CL:0000791!2.34e-12!18;CL:0000789!2.34e-12!18;CL:0002420!2.34e-12!18;CL:0002419!2.34e-12!18;CL:0000790!2.34e-12!18;CL:0002032!5.04e-12!165;CL:0000837!5.04e-12!165;CL:0000134!3.17e-11!358;CL:0002009!7.05e-11!65;CL:0002320!9.68e-11!365;CL:0002194!1.03e-10!63;CL:0000576!1.03e-10!63;CL:0000040!1.03e-10!63;CL:0000559!1.03e-10!63;CL:0000219!3.39e-10!390;CL:0000557!3.65e-09!71;CL:0000839!1.37e-08!70;CL:0000766!2.32e-08!76;CL:0000625!2.72e-08!11;CL:0002371!2.16e-07!591 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.04e-17;25!CL:0000791;6.78e-15;18!CL:0000789;6.78e-15;18!CL:0002419;6.78e-15;18!CL:0000860;1.50e-14;33!CL:0002057;1.50e-14;33!CL:0000473;3.76e-12;39!CL:0000234;3.76e-12;39!CL:0000576;4.03e-11;48!CL:0000542;2.47e-10;53!CL:0002087;3.36e-10;104!CL:0000625;7.31e-10;11!CL:0000738;5.23e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.70e-32,115;CL:0000738,4.51e-29,136;CL:0002031,1.73e-27,120;CL:0000037,3.01e-20,168;CL:0000860,9.33e-19,42;CL:0002057,9.33e-19,42;CL:0000988,1.82e-18,177;CL:0000473,6.67e-18,48;CL:0000234,6.67e-18,48;CL:0002032,1.71e-17,161;CL:0000837,1.71e-17,161;CL:0000084,3.94e-17,25;CL:0000827,3.94e-17,25;CL:0000838,9.40e-17,52;CL:0000542,1.10e-16,53;CL:0000051,1.10e-16,53;CL:0000723,1.17e-15,433;CL:0000048,2.94e-15,427;CL:0000034,3.01e-15,441;CL:0000791,1.16e-14,18;CL:0000789,1.16e-14,18;CL:0002420,1.16e-14,18;CL:0002419,1.16e-14,18;CL:0000790,1.16e-14,18;CL:0000134,2.09e-14,354;CL:0002009,4.00e-14,61;CL:0002194,6.06e-14,59;CL:0000576,6.06e-14,59;CL:0000040,6.06e-14,59;CL:0000559,6.06e-14,59;CL:0000219,1.10e-13,386;CL:0002320,2.12e-13,361;CL:0000557,6.40e-12,67;CL:0000766,2.25e-11,72;CL:0000839,2.86e-11,66;CL:0000625,9.92e-10,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.78e-15;18!CL:0002057;4.57e-14;42!CL:0000051;2.47e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.59e-15!112;UBERON:0002390!7.29e-15!102;UBERON:0003061!7.29e-15!102;UBERON:0003081!3.89e-12!216;UBERON:0002384!7.07e-11!375;UBERON:0002371!9.83e-11!80;UBERON:0002204!2.24e-10!167;UBERON:0001474!4.62e-10!86;UBERON:0004765!8.41e-10!101;UBERON:0001434!8.41e-10!101;UBERON:0002405!9.70e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.12e-18,108;UBERON:0002390,9.07e-18,98;UBERON:0003061,9.07e-18,98;UBERON:0002405,4.29e-15,93;UBERON:0002371,5.96e-14,76;UBERON:0003081,7.42e-14,203;UBERON:0001474,1.50e-13,82;UBERON:0002384,2.93e-13,371;UBERON:0001434,4.55e-12,100;UBERON:0004765,1.59e-11,90;UBERON:0002204,5.02e-11,167;UBERON:0000926,2.16e-08,315;UBERON:0004120,2.16e-08,315;UBERON:0006603,2.16e-08,315 | |||
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| ||
|short_description=p4@CCDC109B | |||
}} | }} |
Latest revision as of 16:13, 24 September 2015
Short description: | p4@CCDC109B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CCDC109B_5end |
Coexpression cluster: | NA |
Association with transcript: | 93bp_to_ENST00000515114_5end |
EntrezGene: | CCDC109B |
HGNC: | 26076 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.12e-18 | 108 |
hematopoietic system | 9.07e-18 | 98 |
blood island | 9.07e-18 | 98 |
immune system | 4.29e-15 | 93 |
bone marrow | 5.96e-14 | 76 |
lateral plate mesoderm | 7.42e-14 | 203 |
bone element | 1.50e-13 | 82 |
connective tissue | 2.93e-13 | 371 |
skeletal system | 4.55e-12 | 100 |
skeletal element | 1.59e-11 | 90 |
musculoskeletal system | 5.02e-11 | 167 |
mesoderm | 2.16e-08 | 315 |
mesoderm-derived structure | 2.16e-08 | 315 |
presumptive mesoderm | 2.16e-08 | 315 |