FFCP PHASE1:Hg19::chr19:6590918..6590923,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=970 | |EntrezGene=970 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11937 | |HGNC=11937 | ||
|TSSclassifier=strong | |||
|UniProt=Q53XX4 | |UniProt=Q53XX4 | ||
|association_with_transcript=89bp_to_AB590870,BT007211_5end | |association_with_transcript=89bp_to_AB590870,BT007211_5end | ||
|cluster_id=chr19:6590918..6590923,- | |||
|coexpression_cluster_id=C3830 | |coexpression_cluster_id=C3830 | ||
|description=CAGE_peak_9_at_CD70_5end | |description=CAGE_peak_9_at_CD70_5end | ||
|id=chr19:6590918..6590923,- | |id=chr19:6590918..6590923,- | ||
|ontology_enrichment_celltype=CL:0000785;1.19e-07;1!CL:0000819;1.19e-07;1!CL:0002379;1.19e-07;1 | |ontology_enrichment_celltype=CL:0000542!1.30e-12!53;CL:0000051!1.30e-12!53;CL:0000838!1.24e-11!52;CL:0000945!1.82e-09!24;CL:0000826!1.82e-09!24 | ||
| | |ontology_enrichment_celltype_v019=CL:0000785;1.19e-07;1!CL:0000819;1.19e-07;1!CL:0002379;1.19e-07;1 | ||
|ontology_enrichment_disease=DOID:0060058;9.64e-10;10!DOID:3620;1.19e-07;1!DOID:0060073;1.19e-07;1!DOID:8675;1.19e-07;1!DOID:3565;1.19e-07;1!DOID:12603;3.40e-07;1!DOID:225;3.40e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0002379,1.06e-07,1;CL:0000819,1.44e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0001737;3.64e-41;9!UBERON:0001557;3.64e-41;9!UBERON:0000072;6.70e-11;37!UBERON:0000065;9.12e-09;44 | |ontology_enrichment_development_v019=UBERON:0008947;4.02e-15;29 | ||
|ontology_enrichment_disease=DOID:14566!8.64e-15!239;DOID:162!4.86e-14!235;DOID:2531!2.98e-12!51;DOID:0060083!2.98e-12!51;DOID:0060058!4.22e-11!10;DOID:0050686!4.09e-10!137 | |||
|ontology_enrichment_disease_v019=DOID:0060058;9.64e-10;10!DOID:3620;1.19e-07;1!DOID:0060073;1.19e-07;1!DOID:8675;1.19e-07;1!DOID:3565;1.19e-07;1!DOID:12603;3.40e-07;1!DOID:225;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.97e-11,235;DOID:14566,2.12e-10,239;DOID:0060058,1.25e-09,10;DOID:305,2.89e-08,106;DOID:2531,7.02e-08,51;DOID:0060083,7.02e-08,51;DOID:3620,1.06e-07,1;DOID:3565,1.06e-07,1;DOID:0060073,1.44e-07,1;DOID:8675,1.44e-07,1;DOID:12603,5.19e-07,1;DOID:225,6.57e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.01e-17!9;UBERON:0001557!5.86e-14!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.64e-41;9!UBERON:0001557;3.64e-41;9!UBERON:0000072;6.70e-11;37!UBERON:0000065;9.12e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,8.42e-42,9;UBERON:0001557,3.38e-19,19;UBERON:0008947,2.73e-11,38;UBERON:0003258,2.73e-11,38;UBERON:0000072,7.60e-09,47;UBERON:0000065,1.65e-07,54 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.687720651731561,0.738905305049512,0.708397031823113,0,0,0,0,0,0,1.08454080812422,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.668745981562712,0,0,0,1.00269411196656,0.883817722424512,0.443067789167242,0,2.17755243533648,1.30059347559878,0.986627427622057,0,0,0,0,0,0.679856056185397,0.766440987203842,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.85443159085912,1.68707720918437,1.21323370005633,1.52515610864684,0.949082476444386,2.96628877952362,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.660075999364704,0,0,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,1.11481905075431,0.432807638929335,0,0.159426272728822,0.199579371432817,0,0,0,0,0.684704037099577,0,0,0,0,1.00899853595524,0.425846237690326,0,1.53620382154229,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0,1.5602073798847,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.176915129006678,0,0,0.494255755786011,0.417687798021821,0,0,0,2.00700268137233,0.978323094660449,0,0,0,0,0,1.20258735531594,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.687944129886466,0,0,0,0.0969890164884194,0.441280633457501,0.225980740780532,0.411125773940253,0,0,0,0,0,0.19980960958213,1.44090417154106,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,1.07572403599707,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,2.35265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,1.389134845943,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0.690860683462397,0,0,0,0.531459361253452,0.490696182767533,0.327609848846413,0,0,0.79994958341972,1.06691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,1.52552838186867,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,1.41832609060762,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0.596493833314104,0,0,2.17144469965024,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,2.11358268930143,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20538905604795,0,0,0,0.204000691244253,0.313454721478088,0,0,0,0.687720651731561,0.738905305049512,0.708397031823113,0,0,0,0,0,0,1.08454080812422,0.710846162437108,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.668745981562712,0,0,0,1.00269411196656,0.883817722424512,0.443067789167242,0,2.17755243533648,1.30059347559878,0.986627427622057,0,0,0,0,0,0.679856056185397,0.766440987203842,0,0,0.637130828648193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30137480043828,1.85443159085912,1.68707720918437,1.21323370005633,1.52515610864684,0.949082476444386,2.96628877952362,1.37355025587742,2.30848294167834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.784596007954691,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46139224653261,0.105551628892876,0,0,0.215915916102139,0,0.812839312631559,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0.457847324091717,0.660075999364704,0,0,0,0.386682873168488,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.427296284509893,0,0,1.11481905075431,0.432807638929335,0,0.159426272728822,0.199579371432817,0,0,0,0,0.684704037099577,0,0,0,0,1.00899853595524,0.425846237690326,0,1.53620382154229,0.447352215784832,0.500547425135725,0,0,0,0,0,0,0,0,0,1.5602073798847,0.568272293612826,0,0,0,0,0,0,0,0,0,0,0,0,0.492339221844278,0,0,0,0.511572370226872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0,0,0,0.176915129006678,0,0,0.494255755786011,0.417687798021821,0,0,0,2.00700268137233,0.978323094660449,0,0,0,0,0,1.20258735531594,0,0,0.330991955875499,0,0,0,0,0,0.195984794828755,0.0870592065804026,0,0.687944129886466,0,0,0,0.0969890164884194,0.441280633457501,0.225980740780532,0.411125773940253,0,0,0,0,0,0.19980960958213,1.44090417154106,0.229073192331831,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,1.8402114799552,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,1.07572403599707,0,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790446527591777,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0.249960815924213,0,0,2.35265819698172,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0.192619830407303,0,0,0,1.389134845943,0,0,0,0,0.353378291891762,0,0,0.256241518587947,0.690860683462397,0,0,0,0.531459361253452,0.490696182767533,0.327609848846413,0,0,0.79994958341972,1.06691729694141,0.172214979660816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0.115525666150338,1.52552838186867,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,1.41832609060762,0.111231401892069,0,0,0,0,0.647782773655864,0,0,0,0,0,0,0,0.17071847709395,0,0,0.354996002191696,0.596493833314104,0,0,2.17144469965024,1.91107787795487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0939839179798536,0,0.89947040332436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,2.11358268930143,0,0.0757786982182394,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0.641136984606466 | ||
|short_description=p9@CD70 | |short_description=p9@CD70 | ||
}} | }} |
Latest revision as of 17:17, 24 September 2015
Short description: | p9@CD70 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CD70_5end |
Coexpression cluster: | C3830_CD4_Hep2_serous_testicular_meningioma_hairy_mesothelioma |
Association with transcript: | 89bp_to_AB590870, BT007211_5end |
EntrezGene: | CD70 |
HGNC: | 11937 |
UniProt: | Q53XX4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meningothelial cell | 1.06e-07 | 1 |
B-1 B cell | 1.44e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
larynx | 8.42e-42 | 9 |
upper respiratory tract | 3.38e-19 | 19 |
respiratory primordium | 2.73e-11 | 38 |
endoderm of foregut | 2.73e-11 | 38 |
segment of respiratory tract | 7.60e-09 | 47 |
respiratory tract | 1.65e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.97e-11 | 235 |
disease of cellular proliferation | 2.12e-10 | 239 |
lymphoma | 1.25e-09 | 10 |
carcinoma | 2.89e-08 | 106 |
hematologic cancer | 7.02e-08 | 51 |
immune system cancer | 7.02e-08 | 51 |
central nervous system cancer | 1.06e-07 | 1 |
meningioma | 1.06e-07 | 1 |
lymphatic system cancer | 1.44e-07 | 1 |
lymphosarcoma | 1.44e-07 | 1 |
acute leukemia | 5.19e-07 | 1 |
syndrome | 6.57e-07 | 1 |