FFCP PHASE1:Hg19::chr5:134263568..134263573,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616209 | |EntrezGene=100616209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41656 | |HGNC=41656 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-155bp_to_NR_039666_5end | |association_with_transcript=-155bp_to_NR_039666_5end | ||
|cluster_id=chr5:134263568..134263573,+ | |||
|coexpression_cluster_id=C4462 | |coexpression_cluster_id=C4462 | ||
|description=CAGE_peak_3_at_MIR4461_5end | |description=CAGE_peak_3_at_MIR4461_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!1.53e-17!42;CL:0000860!7.99e-16!45;CL:0000839!1.19e-15!70;CL:0000557!1.49e-15!71;CL:0000763!1.13e-14!112;CL:0000049!1.13e-14!112;CL:0002009!8.59e-14!65;CL:0000766!1.79e-12!76;CL:0002194!4.54e-12!63;CL:0000576!4.54e-12!63;CL:0000040!4.54e-12!63;CL:0000559!4.54e-12!63;CL:0002031!2.12e-09!124;CL:0002032!3.61e-09!165;CL:0000837!3.61e-09!165;CL:0000037!8.41e-09!172;CL:0000566!8.41e-09!172;CL:0000738!3.53e-08!140;CL:0000453!8.70e-08!5;CL:0000988!1.25e-07!182 | |ontology_enrichment_celltype=CL:0002057!1.53e-17!42;CL:0000860!7.99e-16!45;CL:0000839!1.19e-15!70;CL:0000557!1.49e-15!71;CL:0000763!1.13e-14!112;CL:0000049!1.13e-14!112;CL:0002009!8.59e-14!65;CL:0000766!1.79e-12!76;CL:0002194!4.54e-12!63;CL:0000576!4.54e-12!63;CL:0000040!4.54e-12!63;CL:0000559!4.54e-12!63;CL:0002031!2.12e-09!124;CL:0002032!3.61e-09!165;CL:0000837!3.61e-09!165;CL:0000037!8.41e-09!172;CL:0000566!8.41e-09!172;CL:0000738!3.53e-08!140;CL:0000453!8.70e-08!5;CL:0000988!1.25e-07!182 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.73e-09,48;CL:0000234,1.73e-09,48;CL:0002009,1.32e-08,61;CL:0000763,1.16e-07,108;CL:0000049,1.16e-07,108;CL:0000557,1.84e-07,67;CL:0000839,2.08e-07,66;CL:0000860,3.86e-07,42;CL:0002057,3.86e-07,42;CL:0002194,7.97e-07,59;CL:0000576,7.97e-07,59;CL:0000040,7.97e-07,59;CL:0000559,7.97e-07,59;CL:0000540,9.95e-07,6;CL:0000031,9.95e-07,6;CL:0000404,9.95e-07,6 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-14!80;UBERON:0001474!8.04e-13!86;UBERON:0004765!5.50e-11!101;UBERON:0001434!5.50e-11!101;UBERON:0002390!6.00e-10!102;UBERON:0003061!6.00e-10!102;UBERON:0002193!1.52e-09!112;UBERON:0001737!2.73e-09!9;UBERON:0002405!4.99e-09!115;UBERON:0002204!4.99e-07!167 | |ontology_enrichment_uberon=UBERON:0002371!1.44e-14!80;UBERON:0001474!8.04e-13!86;UBERON:0004765!5.50e-11!101;UBERON:0001434!5.50e-11!101;UBERON:0002390!6.00e-10!102;UBERON:0003061!6.00e-10!102;UBERON:0002193!1.52e-09!112;UBERON:0001737!2.73e-09!9;UBERON:0002405!4.99e-09!115;UBERON:0002204!4.99e-07!167 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.02e-07,56;UBERON:0005068,7.02e-07,56;UBERON:0006241,7.02e-07,56;UBERON:0007135,7.02e-07,56 | |||
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| ||
|short_description=p3@MIR4461 | |short_description=p3@MIR4461 | ||
}} | }} |
Latest revision as of 17:24, 24 September 2015
Short description: | p3@MIR4461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR4461_5end |
Coexpression cluster: | C4462_skeletal_hippocampus_medulla_medial_parietal_thalamus_globus |
Association with transcript: | -155bp_to_NR_039666_5end |
EntrezGene: | MIR4461 |
HGNC: | 41656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.73e-09 | 48 |
phagocyte | 1.73e-09 | 48 |
macrophage dendritic cell progenitor | 1.32e-08 | 61 |
myeloid cell | 1.16e-07 | 108 |
common myeloid progenitor | 1.16e-07 | 108 |
granulocyte monocyte progenitor cell | 1.84e-07 | 67 |
myeloid lineage restricted progenitor cell | 2.08e-07 | 66 |
classical monocyte | 3.86e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-07 | 42 |
monopoietic cell | 7.97e-07 | 59 |
monocyte | 7.97e-07 | 59 |
monoblast | 7.97e-07 | 59 |
promonocyte | 7.97e-07 | 59 |
neuron | 9.95e-07 | 6 |
neuroblast | 9.95e-07 | 6 |
electrically signaling cell | 9.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.02e-07 | 56 |
neural rod | 7.02e-07 | 56 |
future spinal cord | 7.02e-07 | 56 |
neural keel | 7.02e-07 | 56 |