FFCP PHASE1:Hg19::chr5:134263568..134263573,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100616209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=41656 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-155bp_to_NR_039666_5end | |||
|cluster_id=chr5:134263568..134263573,+ | |||
|coexpression_cluster_id=C4462 | |||
|description=CAGE_peak_3_at_MIR4461_5end | |||
|id=chr5:134263568..134263573,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.53e-17!42;CL:0000860!7.99e-16!45;CL:0000839!1.19e-15!70;CL:0000557!1.49e-15!71;CL:0000763!1.13e-14!112;CL:0000049!1.13e-14!112;CL:0002009!8.59e-14!65;CL:0000766!1.79e-12!76;CL:0002194!4.54e-12!63;CL:0000576!4.54e-12!63;CL:0000040!4.54e-12!63;CL:0000559!4.54e-12!63;CL:0002031!2.12e-09!124;CL:0002032!3.61e-09!165;CL:0000837!3.61e-09!165;CL:0000037!8.41e-09!172;CL:0000566!8.41e-09!172;CL:0000738!3.53e-08!140;CL:0000453!8.70e-08!5;CL:0000988!1.25e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.73e-09,48;CL:0000234,1.73e-09,48;CL:0002009,1.32e-08,61;CL:0000763,1.16e-07,108;CL:0000049,1.16e-07,108;CL:0000557,1.84e-07,67;CL:0000839,2.08e-07,66;CL:0000860,3.86e-07,42;CL:0002057,3.86e-07,42;CL:0002194,7.97e-07,59;CL:0000576,7.97e-07,59;CL:0000040,7.97e-07,59;CL:0000559,7.97e-07,59;CL:0000540,9.95e-07,6;CL:0000031,9.95e-07,6;CL:0000404,9.95e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.44e-14!80;UBERON:0001474!8.04e-13!86;UBERON:0004765!5.50e-11!101;UBERON:0001434!5.50e-11!101;UBERON:0002390!6.00e-10!102;UBERON:0003061!6.00e-10!102;UBERON:0002193!1.52e-09!112;UBERON:0001737!2.73e-09!9;UBERON:0002405!4.99e-09!115;UBERON:0002204!4.99e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.02e-07,56;UBERON:0005068,7.02e-07,56;UBERON:0006241,7.02e-07,56;UBERON:0007135,7.02e-07,56 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,3.61616716814386,2.92124036154949,2.92759679274304,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.587200878669695,0,0,0,0,0,0,0.290796477559129,0,0.242584061187816,0.464858073811369,0,1.23882548358041,0,0.512321413058201,0,1.03423704220986,0,1.35426486594342,0.752969358170419,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0.329851300186716,0.797854630486527,0.852449501065388,1.7412554317715,0.56738522469114,0,1.00499466102697,1.5644487552606,1.3031330682307,0,0,1.58231193720442,0.845021145247767,1.27562579979026,2.93522103711726,1.46027220490444,1.05123824989054,0.48217676009124,0,1.39241674039363,1.82664153764634,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.31692042387539,0,0,0,1.00311897234407,0.32592226663359,0,3.89653456815823,0.222820913770347,1.76763544484902,0.886135578334485,0,0.512365278902701,1.1705341280389,0.493313713811028,0.552700035571697,0.289803085735052,0.889719378972363,1.60524496853828,1.04535523804977,0.906474741580529,0.766440987203842,0.34362744548263,0.759059076058509,0,0,0,0,0,0,0.236777252044017,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.03797398034279,0,0,0,1.93975268182574,0,0,0,0,0,0,0,0,0,0,1.00928340350251,2.18986415445498,0,0,0,0,0,1.18306800039844,0.337169380156203,0,0.772057809126758,2.17879444092406,0.949082476444386,1.34831308160164,1.76599318612811,2.30848294167834,0,0,0,0,0,0,0,0,0,0.343135620597051,0,0,0,0,0,0,0,0.34779121492523,0.117408694235822,0,0.925971025153221,1.33177906564219,0,0,0,0,0,0,2.18376766658517,0.708875486211932,0,0,0,0,0.528290604079356,0.207328115540772,0.288239906833923,0.12624243342638,0.507983154337352,0,0,0,0,1.8020583470635,2.85826432630578,0,0,0,0,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,3.51579964002488,2.10833939483032,0,0,4.27910715122155,0,0,0,0,0,0,0,0,0,0,0,1.91381625495949,0,0,0,0,0,0,1.03985430765404,1.96271887676878,1.57702415033935,0.937131319941706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09629938322967,1.0457418040996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65896526242959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383010740264733,0,2.921597462471,0,0,0,7.51903431270201,3.04725200042886,0,0,0,0,0,0,0,0,0,0,2.43410110628385,0,0,0,0,0,0,0,2.3874448473769,0.593929361665277,0,10.9356241254293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42870692906919,0,3.05163472634166,0,0,0,0,0,0,0,0,0,0,1.91400695839152,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.40588404193705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.1093641063768,0,1.28602518772015,2.61324929534744,5.40072439437941,2.249738915515,4.6428117273477,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.00777164720807,0,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0,0,9.74674997963685,2.56255156294123,0,14.9086390879419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,1.34940933649081,0,2.90294345488599,0,1.04349012362347,0,3.80805212168795,0,0,0,0.464033759878494,2.3885753321917,0,1.71697852591396,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.664324201566815,2.12635012532597,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.25089728976755,0,0,0,0,0,5.71077681036618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.59185908475232,0,0,0,0,0,0,0,6.42842203053944,0,1.82089681270989,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24082554265728,0.955538938977433,0,0,0,12.9485767437579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.12247780941385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.1458471972939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@MIR4461 | |||
}} |
Latest revision as of 17:24, 24 September 2015
Short description: | p3@MIR4461 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MIR4461_5end |
Coexpression cluster: | C4462_skeletal_hippocampus_medulla_medial_parietal_thalamus_globus |
Association with transcript: | -155bp_to_NR_039666_5end |
EntrezGene: | MIR4461 |
HGNC: | 41656 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.73e-09 | 48 |
phagocyte | 1.73e-09 | 48 |
macrophage dendritic cell progenitor | 1.32e-08 | 61 |
myeloid cell | 1.16e-07 | 108 |
common myeloid progenitor | 1.16e-07 | 108 |
granulocyte monocyte progenitor cell | 1.84e-07 | 67 |
myeloid lineage restricted progenitor cell | 2.08e-07 | 66 |
classical monocyte | 3.86e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.86e-07 | 42 |
monopoietic cell | 7.97e-07 | 59 |
monocyte | 7.97e-07 | 59 |
monoblast | 7.97e-07 | 59 |
promonocyte | 7.97e-07 | 59 |
neuron | 9.95e-07 | 6 |
neuroblast | 9.95e-07 | 6 |
electrically signaling cell | 9.95e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 7.02e-07 | 56 |
neural rod | 7.02e-07 | 56 |
future spinal cord | 7.02e-07 | 56 |
neural keel | 7.02e-07 | 56 |