FFCP PHASE1:Hg19::chr2:219433281..219433406,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9125 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10445 | |||
|TSSclassifier=strong | |||
|UniProt=Q92600,B7Z1E5 | |||
|association_with_transcript=0bp_to_ENST00000273064,ENST00000509807_5end | |||
|cluster_id=chr2:219433281..219433406,+ | |||
|description=CAGE_peak_2_at_RQCD1_5end | |||
|id=chr2:219433281..219433406,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.75e-18!180;CL:0002321!1.60e-13!248;CL:0000220!4.68e-13!246;CL:0000548!1.18e-10!679;CL:0000004!1.18e-10!679;CL:0000255!1.18e-10!679;CL:0000012!1.68e-10!682;CL:0000221!9.80e-10!71;CL:0000133!4.27e-09!59;CL:0000066!6.37e-09!254;CL:0000333!7.97e-09!41;CL:0000144!3.39e-07!625;CL:0000057!8.99e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.46e-13,250;CL:0000221,3.94e-09,72;CL:0000133,4.27e-09,59;CL:0000066,5.39e-09,253;CL:0000333,7.97e-09,41;CL:0000057,6.13e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!3.82e-07!118;UBERON:0002049!6.40e-07!79;UBERON:0007798!6.40e-07!79 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.00e-07,117;UBERON:0002049,9.35e-07,78;UBERON:0007798,9.35e-07,78 | |||
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| |||
|short_description=p2@RQCD1 | |||
}} |
Latest revision as of 17:48, 24 September 2015
Short description: | p2@RQCD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RQCD1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000273064, ENST00000509807_5end |
EntrezGene: | RQCD1 |
HGNC: | 10445 |
UniProt: | Q92600B7Z1E5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.46e-13 | 250 |
ectodermal cell | 3.94e-09 | 72 |
neurectodermal cell | 4.27e-09 | 59 |
epithelial cell | 5.39e-09 | 253 |
migratory neural crest cell | 7.97e-09 | 41 |
fibroblast | 6.13e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 3.00e-07 | 117 |
vasculature | 9.35e-07 | 78 |
vascular system | 9.35e-07 | 78 |