FFCP PHASE1:Hg19::chr19:6680204..6680234,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=718 | |EntrezGene=718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1318 | |HGNC=1318 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-42bp_to_ENST00000482039_5end | |association_with_transcript=-42bp_to_ENST00000482039_5end | ||
|cluster_id=chr19:6680204..6680234,- | |||
|coexpression_cluster_id=C5 | |coexpression_cluster_id=C5 | ||
|description=CAGE_peak_8_at_C3_5end | |description=CAGE_peak_8_at_C3_5end | ||
Latest revision as of 17:52, 24 September 2015
| Short description: | p8@C3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_8_at_C3_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | -42bp_to_ENST00000482039_5end |
| EntrezGene: | C3 |
| HGNC: | 1318 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
| Sample | p8@C3 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CD1a-positive Langerhans cell | 1.00e-15 | 2 |
| immature CD1a-positive Langerhans cell | 1.00e-15 | 2 |
| macrophage | 1.01e-11 | 6 |
| hepatocyte | 4.10e-10 | 12 |
| macrophage dendritic cell progenitor | 5.46e-08 | 61 |
| granulocyte monocyte progenitor cell | 3.65e-07 | 67 |
| Langerhans cell | 8.41e-07 | 5 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| digestive tract diverticulum | 7.75e-15 | 23 |
| epithelium of foregut-midgut junction | 1.19e-13 | 25 |
| anatomical boundary | 1.19e-13 | 25 |
| hepatobiliary system | 1.19e-13 | 25 |
| foregut-midgut junction | 1.19e-13 | 25 |
| septum transversum | 1.19e-13 | 25 |
| liver | 1.44e-13 | 19 |
| digestive gland | 1.44e-13 | 19 |
| liver bud | 1.44e-13 | 19 |
| sac | 4.96e-13 | 26 |
Showing 1 to 10 of 30 entries
