FFCP PHASE1:Hg19::chr16:14724057..14724130,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5073 | |EntrezGene=5073 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8609 | |HGNC=8609 | ||
|TSSclassifier=strong | |||
|UniProt=B4DDG8,B4DWR4,O95453,F5H1Z4,B4DSB0,B3KN69 | |UniProt=B4DDG8,B4DWR4,O95453,F5H1Z4,B4DSB0,B3KN69 | ||
|association_with_transcript=0bp_to_ENST00000341484,ENST00000420015,ENST00000437198,ENST00000538472,ENST00000539279,NM_001134477,NM_001242992,NM_002582,uc010uzc.1,uc010uzd.1,uc010uze.1,uc010uzf.1,uc010uzg.1_5end | |association_with_transcript=0bp_to_ENST00000341484,ENST00000420015,ENST00000437198,ENST00000538472,ENST00000539279,NM_001134477,NM_001242992,NM_002582,uc010uzc.1,uc010uzd.1,uc010uze.1,uc010uzf.1,uc010uzg.1_5end | ||
|cluster_id=chr16:14724057..14724130,- | |||
|description=CAGE_peak_1_at_PARN_5end | |description=CAGE_peak_1_at_PARN_5end | ||
|id=chr16:14724057..14724130,- | |id=chr16:14724057..14724130,- | ||
|ontology_enrichment_celltype=CL:0000838!6.04e-15!52;CL:0000542!8.15e-15!53;CL:0000051!8.15e-15!53;CL:0000945!3.11e-10!24;CL:0000826!3.11e-10!24;CL:0000236!1.24e-07!14;CL:0000037!1.74e-07!172;CL:0000566!1.74e-07!172;CL:0000791!8.80e-07!18;CL:0000789!8.80e-07!18;CL:0002420!8.80e-07!18;CL:0002419!8.80e-07!18;CL:0000790!8.80e-07!18 | |ontology_enrichment_celltype=CL:0000838!6.04e-15!52;CL:0000542!8.15e-15!53;CL:0000051!8.15e-15!53;CL:0000945!3.11e-10!24;CL:0000826!3.11e-10!24;CL:0000236!1.24e-07!14;CL:0000037!1.74e-07!172;CL:0000566!1.74e-07!172;CL:0000791!8.80e-07!18;CL:0000789!8.80e-07!18;CL:0002420!8.80e-07!18;CL:0002419!8.80e-07!18;CL:0000790!8.80e-07!18 | ||
|ontology_enrichment_celltype_v019=CL:0000945;3.04e-10;24!CL:0000542;3.25e-09;53!CL:0000236;7.96e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,6.04e-15,52;CL:0000542,8.15e-15,53;CL:0000051,8.15e-15,53;CL:0000945,3.11e-10,24;CL:0000826,3.11e-10,24;CL:0000236,1.24e-07,14;CL:0000037,5.07e-07,168;CL:0000791,8.80e-07,18;CL:0000789,8.80e-07,18;CL:0002420,8.80e-07,18;CL:0002419,8.80e-07,18;CL:0000790,8.80e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000051;3.25e-09;53 | |||
|ontology_enrichment_disease=DOID:14566!1.37e-10!239;DOID:162!1.98e-10!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.37e-10,239;DOID:162,1.98e-10,235 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.74e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.48e-09,114 | |||
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| ||
|short_description=p1@PARN | |short_description=p1@PARN | ||
}} | }} |
Latest revision as of 17:52, 24 September 2015
Short description: | p1@PARN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PARN_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341484, ENST00000420015, ENST00000437198, ENST00000538472, ENST00000539279, NM_001134477, NM_001242992, NM_002582, uc010uzc.1, uc010uzd.1, uc010uze.1, uc010uzf.1, uc010uzg.1_5end |
EntrezGene: | PARN |
HGNC: | 8609 |
UniProt: | B4DDG8B4DWR4O95453F5H1Z4B4DSB0B3KN69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 6.04e-15 | 52 |
lymphocyte | 8.15e-15 | 53 |
common lymphoid progenitor | 8.15e-15 | 53 |
lymphocyte of B lineage | 3.11e-10 | 24 |
pro-B cell | 3.11e-10 | 24 |
B cell | 1.24e-07 | 14 |
hematopoietic stem cell | 5.07e-07 | 168 |
mature alpha-beta T cell | 8.80e-07 | 18 |
alpha-beta T cell | 8.80e-07 | 18 |
immature T cell | 8.80e-07 | 18 |
mature T cell | 8.80e-07 | 18 |
immature alpha-beta T cell | 8.80e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.48e-09 | 114 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.37e-10 | 239 |
cancer | 1.98e-10 | 235 |