FFCP PHASE1:Hg19::chr20:21494684..21494708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4821 | |EntrezGene=4821 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7835 | |HGNC=7835 | ||
|TSSclassifier=strong | |||
|UniProt=O95096 | |UniProt=O95096 | ||
|association_with_transcript=-20bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | |association_with_transcript=-20bp_to_ENST00000377142,NM_002509,uc002wsi.2_5end | ||
|cluster_id=chr20:21494684..21494708,- | |||
|coexpression_cluster_id=C398 | |coexpression_cluster_id=C398 | ||
|description=CAGE_peak_1_at_NKX2-2_5end | |description=CAGE_peak_1_at_NKX2-2_5end | ||
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|ontology_enrichment_celltype=CL:0002319!4.74e-10!25;CL:0000095!4.63e-07!17;CL:0000123!4.63e-07!17 | |ontology_enrichment_celltype=CL:0002319!4.74e-10!25;CL:0000095!4.63e-07!17;CL:0000123!4.63e-07!17 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.80e-20;82!UBERON:0006241;1.59e-09;3!UBERON:0003057;1.59e-09;3!UBERON:0006215;3.95e-08;3!UBERON:0006238;1.26e-07;10 | |ontology_enrichment_development_v019=UBERON:0006601;7.80e-20;82!UBERON:0006241;1.59e-09;3!UBERON:0003057;1.59e-09;3!UBERON:0006215;3.95e-08;3!UBERON:0006238;1.26e-07;10 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.01e-76!82;UBERON:0000073!4.83e-72!94;UBERON:0001016!4.83e-72!94;UBERON:0005743!9.40e-72!86;UBERON:0001049!2.51e-70!57;UBERON:0005068!2.51e-70!57;UBERON:0006241!2.51e-70!57;UBERON:0007135!2.51e-70!57;UBERON:0000955!7.63e-68!69;UBERON:0006238!7.63e-68!69;UBERON:0002616!1.64e-60!59;UBERON:0002780!7.86e-52!41;UBERON:0001890!7.86e-52!41;UBERON:0006240!7.86e-52!41;UBERON:0003080!2.65e-50!42;UBERON:0002346!1.03e-47!90;UBERON:0003075!1.34e-46!86;UBERON:0007284!1.34e-46!86;UBERON:0002020!4.26e-45!34;UBERON:0003528!4.26e-45!34;UBERON:0001893!5.51e-45!34;UBERON:0002791!1.26e-43!33;UBERON:0001869!1.18e-41!32;UBERON:0000924!1.11e-40!173;UBERON:0006601!1.11e-40!173;UBERON:0004121!2.58e-39!169;UBERON:0000033!2.39e-35!123;UBERON:0000153!2.79e-35!129;UBERON:0007811!2.79e-35!129;UBERON:0002619!2.71e-34!22;UBERON:0003056!2.37e-32!61;UBERON:0000956!6.00e-32!25;UBERON:0000203!6.00e-32!25;UBERON:0001950!1.05e-31!20;UBERON:0007023!3.50e-29!115;UBERON:0003076!2.84e-20!15;UBERON:0003057!2.84e-20!15;UBERON:0004732!5.20e-17!13;UBERON:0004733!2.35e-15!12;UBERON:0002028!2.35e-15!12;UBERON:0007277!2.35e-15!12;UBERON:0002308!1.76e-14!9;UBERON:0000125!1.76e-14!9;UBERON:0002420!5.11e-14!9;UBERON:0007245!5.11e-14!9;UBERON:0010009!5.11e-14!9;UBERON:0010011!5.11e-14!9;UBERON:0000454!5.11e-14!9;UBERON:0001871!4.16e-13!7;UBERON:0000025!5.42e-13!194;UBERON:0009663!1.90e-11!7;UBERON:0002680!6.31e-11!9;UBERON:0001895!6.31e-11!9;UBERON:0010092!6.31e-11!9;UBERON:0002298!1.37e-10!8;UBERON:0000200!1.85e-10!6;UBERON:0001872!5.37e-09!5;UBERON:0000475!8.27e-09!365;UBERON:0002021!1.38e-08!5;UBERON:0004111!1.68e-08!241;UBERON:0001894!3.50e-08!7;UBERON:0006222!3.50e-08!7;UBERON:0000349!4.14e-08!5;UBERON:0000477!1.07e-07!286;UBERON:0000064!3.52e-07!219;UBERON:0000483!5.80e-07!309;UBERON:0000369!6.10e-07!4;UBERON:0002435!6.10e-07!4;UBERON:0000204!6.10e-07!4;UBERON:0010082!6.10e-07!4;UBERON:0000062!9.53e-07!511;UBERON:0000119!9.54e-07!312 | |ontology_enrichment_uberon=UBERON:0001017!3.01e-76!82;UBERON:0000073!4.83e-72!94;UBERON:0001016!4.83e-72!94;UBERON:0005743!9.40e-72!86;UBERON:0001049!2.51e-70!57;UBERON:0005068!2.51e-70!57;UBERON:0006241!2.51e-70!57;UBERON:0007135!2.51e-70!57;UBERON:0000955!7.63e-68!69;UBERON:0006238!7.63e-68!69;UBERON:0002616!1.64e-60!59;UBERON:0002780!7.86e-52!41;UBERON:0001890!7.86e-52!41;UBERON:0006240!7.86e-52!41;UBERON:0003080!2.65e-50!42;UBERON:0002346!1.03e-47!90;UBERON:0003075!1.34e-46!86;UBERON:0007284!1.34e-46!86;UBERON:0002020!4.26e-45!34;UBERON:0003528!4.26e-45!34;UBERON:0001893!5.51e-45!34;UBERON:0002791!1.26e-43!33;UBERON:0001869!1.18e-41!32;UBERON:0000924!1.11e-40!173;UBERON:0006601!1.11e-40!173;UBERON:0004121!2.58e-39!169;UBERON:0000033!2.39e-35!123;UBERON:0000153!2.79e-35!129;UBERON:0007811!2.79e-35!129;UBERON:0002619!2.71e-34!22;UBERON:0003056!2.37e-32!61;UBERON:0000956!6.00e-32!25;UBERON:0000203!6.00e-32!25;UBERON:0001950!1.05e-31!20;UBERON:0007023!3.50e-29!115;UBERON:0003076!2.84e-20!15;UBERON:0003057!2.84e-20!15;UBERON:0004732!5.20e-17!13;UBERON:0004733!2.35e-15!12;UBERON:0002028!2.35e-15!12;UBERON:0007277!2.35e-15!12;UBERON:0002308!1.76e-14!9;UBERON:0000125!1.76e-14!9;UBERON:0002420!5.11e-14!9;UBERON:0007245!5.11e-14!9;UBERON:0010009!5.11e-14!9;UBERON:0010011!5.11e-14!9;UBERON:0000454!5.11e-14!9;UBERON:0001871!4.16e-13!7;UBERON:0000025!5.42e-13!194;UBERON:0009663!1.90e-11!7;UBERON:0002680!6.31e-11!9;UBERON:0001895!6.31e-11!9;UBERON:0010092!6.31e-11!9;UBERON:0002298!1.37e-10!8;UBERON:0000200!1.85e-10!6;UBERON:0001872!5.37e-09!5;UBERON:0000475!8.27e-09!365;UBERON:0002021!1.38e-08!5;UBERON:0004111!1.68e-08!241;UBERON:0001894!3.50e-08!7;UBERON:0006222!3.50e-08!7;UBERON:0000349!4.14e-08!5;UBERON:0000477!1.07e-07!286;UBERON:0000064!3.52e-07!219;UBERON:0000483!5.80e-07!309;UBERON:0000369!6.10e-07!4;UBERON:0002435!6.10e-07!4;UBERON:0000204!6.10e-07!4;UBERON:0010082!6.10e-07!4;UBERON:0000062!9.53e-07!511;UBERON:0000119!9.54e-07!312 | ||
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|short_description=p1@NKX2-2 | |short_description=p1@NKX2-2 | ||
}} | }} |
Latest revision as of 18:10, 24 September 2015
Short description: | p1@NKX2-2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NKX2-2_5end |
Coexpression cluster: | C398_neuroepithelioma_neuroectodermal_carcinoid_neuroblastoma_spinal_brain_synovial |
Association with transcript: | -20bp_to_ENST00000377142, NM_002509, uc002wsi.2_5end |
EntrezGene: | NKX2-2 |
HGNC: | 7835 |
UniProt: | O95096 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data