FFCP PHASE1:Hg19::chr2:219849012..219849065,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54738 | |EntrezGene=54738 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18562 | |HGNC=18562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=131bp_to_ENST00000470119_5end | |association_with_transcript=131bp_to_ENST00000470119_5end | ||
|cluster_id=chr2:219849012..219849065,- | |||
|coexpression_cluster_id=C215 | |coexpression_cluster_id=C215 | ||
|description=CAGE_peak_1_at_FEV_5end | |description=CAGE_peak_1_at_FEV_5end | ||
|id=chr2:219849012..219849065,- | |id=chr2:219849012..219849065,- | ||
|ontology_enrichment_celltype=CL:0000242!3.31e-09!2 | |ontology_enrichment_celltype=CL:0000242!3.31e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.37e-17;2!CL:0000242;1.37e-17;2!CL:0000333;3.65e-15;5!CL:0002553;1.62e-09;1!CL:0000312;1.46e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.37e-17,2;CL:0002553,1.56e-09,1;CL:0000312,1.46e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:171!1.58e-18!10;DOID:169!1.54e-10!6;DOID:3095!4.45e-10!22;DOID:2994!4.45e-10!22 | |ontology_enrichment_disease=DOID:171!1.58e-18!10;DOID:169!1.54e-10!6;DOID:3095!4.45e-10!22;DOID:2994!4.45e-10!22 | ||
|ontology_enrichment_disease_v019=DOID:171;6.47e-29;10!DOID:3095;6.56e-13;22!DOID:2994;6.56e-13;22!DOID:169;9.92e-13;6!DOID:9119;3.98e-09;1!DOID:225;3.98e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:171,6.32e-29,10;DOID:3095,6.49e-13,22;DOID:2994,6.49e-13,22;DOID:169,9.53e-13,6;DOID:225,3.53e-09,1;DOID:9119,4.15e-09,1;DOID:162,7.70e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0000013!1.22e-12!5;UBERON:0002410!1.22e-12!5;UBERON:0000988!5.89e-12!3;UBERON:0002298!1.94e-11!8;UBERON:0000073!6.23e-09!94;UBERON:0001016!6.23e-09!94;UBERON:0002346!1.09e-08!90;UBERON:0002148!1.61e-08!2;UBERON:0009662!1.61e-08!2;UBERON:0003076!2.85e-08!15;UBERON:0003057!2.85e-08!15;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0004733!1.61e-07!12;UBERON:0002028!1.61e-07!12;UBERON:0007277!1.61e-07!12;UBERON:0000010!5.04e-07!8;UBERON:0004732!6.48e-07!13 | |ontology_enrichment_uberon=UBERON:0000013!1.22e-12!5;UBERON:0002410!1.22e-12!5;UBERON:0000988!5.89e-12!3;UBERON:0002298!1.94e-11!8;UBERON:0000073!6.23e-09!94;UBERON:0001016!6.23e-09!94;UBERON:0002346!1.09e-08!90;UBERON:0002148!1.61e-08!2;UBERON:0009662!1.61e-08!2;UBERON:0003076!2.85e-08!15;UBERON:0003057!2.85e-08!15;UBERON:0001049!1.18e-07!57;UBERON:0005068!1.18e-07!57;UBERON:0006241!1.18e-07!57;UBERON:0007135!1.18e-07!57;UBERON:0004733!1.61e-07!12;UBERON:0002028!1.61e-07!12;UBERON:0007277!1.61e-07!12;UBERON:0000010!5.04e-07!8;UBERON:0004732!6.48e-07!13 | ||
|ontology_enrichment_uberon_v019=UBERON:0002346;3.46e-19;4!UBERON:0000923;3.46e-19;4!UBERON:0010316;3.46e-19;4!UBERON:0005291;3.46e-19;4!UBERON:0002050;1.81e-15;5!UBERON:0005423;1.81e-15;5!UBERON:0000013;3.65e-15;5!UBERON:0002410;3.65e-15;5!UBERON:0000988;2.44e-11;3!UBERON:0000010;1.18e-08;8!UBERON:0002108;3.79e-07;4!UBERON:0000160;4.11e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,3.48e-15,5;UBERON:0002410,3.48e-15,5;UBERON:0000988,3.52e-11,3;UBERON:0000010,1.15e-08,8;UBERON:0000160,3.54e-07,17;UBERON:0002108,3.67e-07,4 | |||
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| ||
|short_description=p1@FEV | |short_description=p1@FEV | ||
}} | }} |
Latest revision as of 18:59, 24 September 2015
Short description: | p1@FEV |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FEV_5end |
Coexpression cluster: | C215_chronic_acute_peripheral_Hepatocyte_osteosarcoma_NK_immature |
Association with transcript: | 131bp_to_ENST00000470119_5end |
EntrezGene: | FEV |
HGNC: | 18562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.37e-17 | 2 |
lung fibroblast | 1.56e-09 | 1 |
keratinocyte | 1.46e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 3.48e-15 | 5 |
autonomic nervous system | 3.48e-15 | 5 |
pons | 3.52e-11 | 3 |
peripheral nervous system | 1.15e-08 | 8 |
intestine | 3.54e-07 | 17 |
small intestine | 3.67e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 6.32e-29 | 10 |
germ cell and embryonal cancer | 6.49e-13 | 22 |
germ cell cancer | 6.49e-13 | 22 |
neuroendocrine tumor | 9.53e-13 | 6 |
syndrome | 3.53e-09 | 1 |
acute myeloid leukemia | 4.15e-09 | 1 |
cancer | 7.70e-07 | 235 |