FFCP PHASE1:Hg19::chr1:209605353..209605359,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=406988,642587 | |EntrezGene=406988,642587 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=31583,43562 | |HGNC=31583,43562 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-118bp_to_NR_029622,uc010psk.1_5end | |association_with_transcript=-118bp_to_NR_029622,uc010psk.1_5end | ||
|cluster_id=chr1:209605353..209605359,+ | |||
|description=CAGE_peak_2_at_MIR205_5end,CAGE_peak_5_at_MIR205HG_5end | |description=CAGE_peak_2_at_MIR205_5end,CAGE_peak_5_at_MIR205HG_5end | ||
|id=chr1:209605353..209605359,+ | |id=chr1:209605353..209605359,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.49e-20!43;CL:0000223!1.06e-16!59;CL:0002368!4.66e-15!13;CL:0000066!3.42e-12!254;CL:0002231!2.26e-11!3;CL:0002336!6.72e-09!1;CL:0002261!6.72e-09!1;CL:0002170!6.72e-09!1;CL:0000244!1.30e-08!4;CL:0000731!1.30e-08!4;CL:0002077!5.27e-08!33;CL:0002322!5.48e-07!5;CL:0000220!8.86e-07!246 | |ontology_enrichment_celltype=CL:0002076!7.49e-20!43;CL:0000223!1.06e-16!59;CL:0002368!4.66e-15!13;CL:0000066!3.42e-12!254;CL:0002231!2.26e-11!3;CL:0002336!6.72e-09!1;CL:0002261!6.72e-09!1;CL:0002170!6.72e-09!1;CL:0000244!1.30e-08!4;CL:0000731!1.30e-08!4;CL:0002077!5.27e-08!33;CL:0002322!5.48e-07!5;CL:0000220!8.86e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002231;2.39e-66;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002231,2.39e-66,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3151!2.40e-09!1;DOID:3149!2.40e-09!1;DOID:1749!7.29e-09!14 | |ontology_enrichment_disease=DOID:3151!2.40e-09!1;DOID:3149!2.40e-09!1;DOID:1749!7.29e-09!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003729!5.48e-14!5;UBERON:0007029!4.54e-09!1;UBERON:0000014!8.51e-09!4;UBERON:0003343!2.48e-08!4;UBERON:0004785!2.48e-08!4;UBERON:0000365!4.70e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002367;2.25e-19;11!UBERON:0010147;2.25e-19;11!UBERON:0003937;6.76e-18;12!UBERON:0005399;6.76e-18;12!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22!UBERON:0000077;8.32e-09;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002367,2.25e-19,11;UBERON:0010147,2.25e-19,11;UBERON:0009846,2.25e-19,11;UBERON:0003353,2.25e-19,11;UBERON:0004902,2.25e-19,11;UBERON:0003820,2.25e-19,11;UBERON:0009847,2.25e-19,11;UBERON:0003937,6.76e-18,12;UBERON:0005399,6.76e-18,12;UBERON:0000162,1.43e-15,14;UBERON:0001353,1.43e-15,14;UBERON:0000163,1.43e-15,14;UBERON:0006866,1.43e-15,14;UBERON:0000164,1.43e-15,14;UBERON:0000931,1.43e-15,14;UBERON:0004122,1.22e-14,15;UBERON:0001046,6.95e-12,19;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22;UBERON:0003064,1.52e-08,28;UBERON:0000077,2.67e-08,29;UBERON:0000161,5.81e-07,36;UBERON:0005153,8.21e-07,37 | |||
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|short_description=p2@MIR205,p5@MIR205HG | |short_description=p2@MIR205,p5@MIR205HG | ||
}} | }} |
Latest revision as of 19:00, 24 September 2015
Short description: | p2@MIR205, p5@MIR205HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR205_5end, CAGE_peak_5_at_MIR205HG_5end |
Coexpression cluster: | NA |
Association with transcript: | -118bp_to_NR_029622, uc010psk.1_5end |
EntrezGene: | 406988,642587 |
HGNC: | 43562&submit=Submit 31583, 43562 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of prostate | 2.39e-66 | 3 |
Ontology term | p-value | n |
---|---|---|
prostate gland | 2.25e-19 | 11 |
male accessory sex gland | 2.25e-19 | 11 |
embryonic cloacal epithelium | 2.25e-19 | 11 |
epithelium of hindgut | 2.25e-19 | 11 |
urogenital sinus epithelium | 2.25e-19 | 11 |
prostate bud | 2.25e-19 | 11 |
prostate field | 2.25e-19 | 11 |
sex gland | 6.76e-18 | 12 |
male reproductive gland | 6.76e-18 | 12 |
cloaca | 1.43e-15 | 14 |
anal region | 1.43e-15 | 14 |
embryonic cloaca | 1.43e-15 | 14 |
terminal part of digestive tract | 1.43e-15 | 14 |
primitive urogenital sinus | 1.43e-15 | 14 |
proctodeum | 1.43e-15 | 14 |
genitourinary system | 1.22e-14 | 15 |
hindgut | 6.95e-12 | 19 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
intermediate mesoderm | 1.52e-08 | 28 |
mixed endoderm/mesoderm-derived structure | 2.67e-08 | 29 |
orifice | 5.81e-07 | 36 |
epithelial bud | 8.21e-07 | 37 |